10 20 30 40 50 60 70 80 1EPG - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER EPIDERMAL GROWTH FACTOR 24-MAR-92 1EPG
TITLE THREE-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE STRUCTURES OF TITLE 2 MOUSE EPIDERMAL GROWTH FACTOR IN ACIDIC AND PHYSIOLOGICAL TITLE 3 PH SOLUTIONS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090
KEYWDS EPIDERMAL GROWTH FACTOR
EXPDTA SOLUTION NMR
AUTHOR D.KOHDA,F.INAGAKI
REVDAT 2 24-FEB-09 1EPG 1 VERSN REVDAT 1 31-JAN-94 1EPG 0
JRNL AUTH D.KOHDA,F.INAGAKI JRNL TITL THREE-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE JRNL TITL 2 STRUCTURES OF MOUSE EPIDERMAL GROWTH FACTOR IN JRNL TITL 3 ACIDIC AND PHYSIOLOGICAL PH SOLUTIONS. JRNL REF BIOCHEMISTRY V. 31 11928 1992 JRNL REFN ISSN 0006-2960 JRNL PMID 1445923 JRNL DOI 10.1021/BI00162A036
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.KOHDA,F.INAGAKI REMARK 1 TITL STRUCTURE OF EPIDERMAL GROWTH FACTOR BOUND TO REMARK 1 TITL 2 PERDEUTERATED DODECYLPHOSPHOCHOLINE MICELLES REMARK 1 TITL 3 DETERMINED BY TWO-DIMENSIONAL NMR AND SIMULATED REMARK 1 TITL 4 ANNEALING CALCULATIONS REMARK 1 REF BIOCHEMISTRY V. 31 677 1992 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.KOHDA,T.SAWADA,F.INAGAKI REMARK 1 TITL CHARACTERIZATION OF PH TITRATION SHIFTS FOR ALL REMARK 1 TITL 2 THE NONLABILE PROTON RESONANCES IN A PROTEIN BY REMARK 1 TITL 3 TWO-DIMENSIONAL NMR: THE CASE OF MOUSE EPIDERMAL REMARK 1 TITL 4 GROWTH FACTOR REMARK 1 REF BIOCHEMISTRY V. 30 4896 1991 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 3 REMARK 1 AUTH D.KOHDA,N.GO,K.HAYASHI,F.INAGAKI REMARK 1 TITL TERTIARY STRUCTURE OF MOUSE EPIDERMAL GROWTH REMARK 1 TITL 2 FACTOR DETERMINED BY TWO-DIMENSIONAL 1H NMR REMARK 1 REF J.BIOCHEM.(TOKYO) V. 103 741 1988 REMARK 1 REFN ISSN 0021-924X REMARK 1 REFERENCE 4 REMARK 1 AUTH D.KOHDA,C.KODAMA,R.KASE,H.NOMOTO,K.HAYASHI, REMARK 1 AUTH 2 F.INAGAKI REMARK 1 TITL A COMPARATIVE 1H NMR STUDY OF MOUSE ALPHA(1-53) REMARK 1 TITL 2 AND BETA(2-53) EPIDERMAL GROWTH FACTORS REMARK 1 REF BIOCHEM.INT. V. 16 647 1988 REMARK 1 REFN ISSN 0158-5231 REMARK 1 REFERENCE 5 REMARK 1 AUTH D.KOHDA,F.INAGAKI REMARK 1 TITL COMPLETE SEQUENCE-SPECIFIC 1H NUCLEAR MAGNETIC REMARK 1 TITL 2 RESONANCE ASSIGNMENTS FOR MOUSE EPIDERMAL GROWTH REMARK 1 TITL 3 FACTOR REMARK 1 REF J.BIOCHEM.(TOKYO) V. 103 554 1988 REMARK 1 REFN ISSN 0021-924X
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1EPG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 22 CG HIS A 22 ND1 -0.105 REMARK 500 TRP A 50 CG TRP A 50 CD2 -0.103 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 49 CD1 - NE1 - CE2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP A 49 NE1 - CE2 - CZ2 ANGL. DEV. = 7.4 DEGREES REMARK 500 TRP A 50 CG - CD1 - NE1 ANGL. DEV. = -7.1 DEGREES REMARK 500 TRP A 50 CD1 - NE1 - CE2 ANGL. DEV. = 6.3 DEGREES REMARK 500 TRP A 50 NE1 - CE2 - CZ2 ANGL. DEV. = 7.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 2 -8.77 71.42 REMARK 500 TYR A 3 95.42 41.98 REMARK 500 PRO A 7 123.07 -37.81 REMARK 500 SER A 9 -19.33 -47.04 REMARK 500 TYR A 10 -76.55 -84.78 REMARK 500 ASP A 11 29.97 30.29 REMARK 500 ASN A 16 101.92 34.93 REMARK 500 SER A 25 -80.78 -44.57 REMARK 500 ASP A 27 17.76 50.56 REMARK 500 SER A 28 -167.34 -75.46 REMARK 500 CYS A 33 -146.93 -64.11 REMARK 500 VAL A 34 -163.20 -162.21 REMARK 500 ILE A 35 54.26 -68.05 REMARK 500 SER A 38 -160.53 -161.20 REMARK 500 ASP A 40 -93.42 -46.50 REMARK 500 CYS A 42 32.61 -171.93 REMARK 500 THR A 44 79.10 -103.57 REMARK 500 LEU A 47 73.03 -62.54 REMARK 500 ARG A 48 -93.67 -147.20 REMARK 500 TRP A 49 -88.09 -32.63 REMARK 500 TRP A 50 -18.25 -44.73 REMARK 500 GLU A 51 -90.45 47.81 REMARK 500 LEU A 52 127.18 172.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 37 0.09 SIDE_CHAIN REMARK 500 ARG A 41 0.32 SIDE_CHAIN REMARK 500 ARG A 48 0.31 SIDE_CHAIN REMARK 500 ARG A 53 0.21 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EPH RELATED DB: PDB
DBREF 1EPG A 1 53 UNP P01132 EGF_MOUSE 977 1029
SEQRES 1 A 53 ASN SER TYR PRO GLY CYS PRO SER SER TYR ASP GLY TYR SEQRES 2 A 53 CYS LEU ASN GLY GLY VAL CYS MET HIS ILE GLU SER LEU SEQRES 3 A 53 ASP SER TYR THR CYS ASN CYS VAL ILE GLY TYR SER GLY SEQRES 4 A 53 ASP ARG CYS GLN THR ARG ASP LEU ARG TRP TRP GLU LEU SEQRES 5 A 53 ARG
SHEET 1 SAB 3 SER A 2 PRO A 4 0 SHEET 2 SAB 3 VAL A 19 ILE A 23 -1 O HIS A 22 N TYR A 3 SHEET 3 SAB 3 SER A 28 ASN A 32 -1 O THR A 30 N MET A 21 SHEET 1 SC 2 TYR A 37 SER A 38 0 SHEET 2 SC 2 THR A 44 ARG A 45 -1 O THR A 44 N SER A 38
SSBOND 1 CYS A 6 CYS A 20 1555 1555 2.02 SSBOND 2 CYS A 14 CYS A 31 1555 1555 2.02 SSBOND 3 CYS A 33 CYS A 42 1555 1555 2.02
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000