10 20 30 40 50 60 70 80 1EIK - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 25-FEB-00 1EIK
TITLE SOLUTION STRUCTURE OF RNA POLYMERASE SUBUNIT RPB5 FROM TITLE 2 METHANOBACTERIUM THERMOAUTOTROPHICUM
COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA POLYMERASE SUBUNIT RPB5; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.6; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMOBACTER SOURCE 3 THERMAUTOTROPHICUS; SOURCE 4 ORGANISM_TAXID: 145262; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET15B
KEYWDS RPB5, RPBH, RNA POLYMERASE SUBUNIT, OCSP, NESG, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, STRUCTURAL GENOMICS, PSI, NORTHEAST KEYWDS 3 STRUCTURAL GENOMICS CONSORTIUM, TRANSFERASE
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR A.YEE,V.BOOTH,A.DHARAMSI,A.ENGEL,A.M.EDWARDS,C.H.ARROWSMITH, AUTHOR 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG)
REVDAT 4 24-FEB-09 1EIK 1 VERSN REVDAT 3 25-JAN-05 1EIK 1 AUTHOR KEYWDS REVDAT 2 12-OCT-04 1EIK 1 KEYWDS JRNL REMARK MASTER REVDAT 1 21-JUN-00 1EIK 0
JRNL AUTH A.YEE,V.BOOTH,A.DHARAMSI,A.ENGEL,A.M.EDWARDS, JRNL AUTH 2 C.H.ARROWSMITH JRNL TITL SOLUTION STRUCTURE OF THE RNA POLYMERASE SUBUNIT JRNL TITL 2 RPB5 FROM METHANOBACTERIUM THERMOAUTOTROPHICUM. JRNL REF PROC.NATL.ACAD.SCI.USA V. 97 6311 2000 JRNL REFN ISSN 0027-8424 JRNL PMID 10841538 JRNL DOI 10.1073/PNAS.97.12.6311
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1EIK COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAR-00. REMARK 100 THE RCSB ID CODE IS RCSB010610.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 150 MM NACL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : U-15N, 13C; 150 MM NACL, 25 REMARK 210 MM PHOSPHATE, 10% D2O, PH 6.5 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, NMRVIEW 3.0 REMARK 210 METHOD USED : DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 3 -67.20 -92.59 REMARK 500 1 LEU A 6 55.67 -169.34 REMARK 500 1 LYS A 7 -74.60 64.29 REMARK 500 1 ASP A 30 48.23 86.94 REMARK 500 1 LEU A 36 166.22 -49.19 REMARK 500 1 PRO A 44 -18.43 -48.17 REMARK 500 1 ILE A 49 26.35 45.45 REMARK 500 1 ARG A 53 100.61 -54.74 REMARK 500 1 THR A 65 44.36 81.25 REMARK 500 2 GLU A 4 -162.65 -100.81 REMARK 500 2 LYS A 7 36.74 -177.42 REMARK 500 2 HIS A 8 -164.96 -175.46 REMARK 500 2 LEU A 10 160.11 -49.93 REMARK 500 2 ASP A 30 44.98 84.95 REMARK 500 2 PRO A 44 -16.98 -48.48 REMARK 500 2 ILE A 49 25.31 45.28 REMARK 500 2 ARG A 53 109.24 -57.35 REMARK 500 2 THR A 65 53.82 82.47 REMARK 500 3 LYS A 2 67.46 -101.86 REMARK 500 3 GLU A 4 -162.41 64.32 REMARK 500 3 ILE A 5 -86.31 -72.09 REMARK 500 3 LEU A 6 106.40 53.29 REMARK 500 3 LYS A 7 162.23 60.66 REMARK 500 3 LEU A 10 -62.50 -102.11 REMARK 500 3 PRO A 12 -177.32 -44.43 REMARK 500 3 ASP A 30 48.12 82.96 REMARK 500 3 PRO A 44 -18.41 -49.02 REMARK 500 3 ILE A 49 25.73 45.50 REMARK 500 3 ARG A 53 100.91 -54.81 REMARK 500 3 THR A 65 45.93 81.46 REMARK 500 3 ALA A 66 27.52 44.41 REMARK 500 4 LYS A 2 -70.03 -111.52 REMARK 500 4 ARG A 3 73.09 56.03 REMARK 500 4 LYS A 7 -158.41 -175.18 REMARK 500 4 HIS A 8 77.49 -63.40 REMARK 500 4 LEU A 10 -84.43 58.17 REMARK 500 4 PRO A 12 -179.13 -65.12 REMARK 500 4 ASP A 30 44.39 83.91 REMARK 500 4 PRO A 44 -19.10 -48.66 REMARK 500 4 ILE A 49 27.02 43.75 REMARK 500 4 ARG A 53 98.08 -54.79 REMARK 500 4 THR A 65 -72.36 85.55 REMARK 500 4 ALA A 66 57.44 174.39 REMARK 500 5 LEU A 6 93.20 -163.25 REMARK 500 5 LYS A 7 -42.03 179.87 REMARK 500 5 LEU A 10 128.99 65.21 REMARK 500 5 ASP A 30 42.51 83.78 REMARK 500 5 LEU A 36 156.14 -47.61 REMARK 500 5 PRO A 44 -19.52 -47.55 REMARK 500 5 ILE A 49 27.58 43.93 REMARK 500 5 ARG A 53 98.64 -54.48 REMARK 500 5 THR A 65 -157.85 76.34 REMARK 500 5 ALA A 66 41.35 -89.92 REMARK 500 6 LYS A 2 -78.01 -103.76 REMARK 500 6 GLU A 4 -167.34 -112.47 REMARK 500 6 LEU A 6 98.02 39.47 REMARK 500 6 LYS A 7 55.16 -165.72 REMARK 500 6 LEU A 10 -65.46 -100.83 REMARK 500 6 ASP A 30 44.45 82.64 REMARK 500 6 PRO A 44 -17.81 -48.43 REMARK 500 6 ILE A 49 25.20 44.90 REMARK 500 6 ARG A 53 100.65 -56.94 REMARK 500 6 THR A 65 44.81 84.49 REMARK 500 7 GLU A 4 -162.38 -120.87 REMARK 500 7 LEU A 6 145.40 71.84 REMARK 500 7 LYS A 7 -46.87 -174.29 REMARK 500 7 GLN A 9 92.26 57.93 REMARK 500 7 ASP A 30 44.60 147.23 REMARK 500 7 PRO A 44 -19.91 -47.71 REMARK 500 7 ILE A 49 25.62 44.31 REMARK 500 7 ARG A 53 100.46 -55.88 REMARK 500 7 THR A 65 -161.93 75.39 REMARK 500 8 GLU A 4 -163.31 -129.50 REMARK 500 8 HIS A 8 41.78 -156.65 REMARK 500 8 LEU A 10 -83.10 -106.48 REMARK 500 8 ASP A 30 33.69 84.92 REMARK 500 8 LEU A 36 157.33 -48.81 REMARK 500 8 PRO A 44 -19.56 -47.74 REMARK 500 8 ILE A 49 27.08 43.85 REMARK 500 8 THR A 65 13.22 81.78 REMARK 500 8 ALA A 66 34.20 75.14 REMARK 500 9 LYS A 2 119.75 64.89 REMARK 500 9 ILE A 5 63.21 -69.78 REMARK 500 9 LEU A 6 146.35 175.66 REMARK 500 9 LYS A 7 94.04 -175.30 REMARK 500 9 HIS A 8 33.73 -148.47 REMARK 500 9 LEU A 10 28.13 -148.82 REMARK 500 9 PRO A 12 -167.51 -77.63 REMARK 500 9 ASP A 30 40.86 83.88 REMARK 500 9 PRO A 44 -18.02 -46.53 REMARK 500 9 ILE A 49 26.76 44.05 REMARK 500 9 ARG A 53 101.78 -54.59 REMARK 500 9 THR A 65 46.66 78.34 REMARK 500 9 ALA A 66 26.76 46.17 REMARK 500 10 LYS A 2 -66.20 -135.84 REMARK 500 10 GLU A 4 -163.45 65.99 REMARK 500 10 LEU A 6 -48.04 -131.77 REMARK 500 10 LYS A 7 48.56 -176.19 REMARK 500 10 GLN A 9 87.85 -165.53 REMARK 500 10 LEU A 10 152.08 59.99 REMARK 500 10 ASP A 30 45.44 84.31 REMARK 500 10 PRO A 44 -19.08 -48.36 REMARK 500 10 ILE A 49 27.66 43.90 REMARK 500 10 ARG A 53 99.38 -54.06 REMARK 500 10 THR A 65 -160.92 77.22 REMARK 500 10 ALA A 66 46.66 -88.91 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TT9 RELATED DB: TARGETDB
DBREF 1EIK A 1 77 UNP O27122 RPOH_METTH 1 77
SEQRES 1 A 77 MET LYS ARG GLU ILE LEU LYS HIS GLN LEU VAL PRO GLU SEQRES 2 A 77 HIS VAL ILE LEU ASN GLU SER GLU ALA LYS ARG VAL LEU SEQRES 3 A 77 LYS GLU LEU ASP ALA HIS PRO GLU GLN LEU PRO LYS ILE SEQRES 4 A 77 LYS THR THR ASP PRO VAL ALA LYS ALA ILE GLY ALA LYS SEQRES 5 A 77 ARG GLY ASP ILE VAL LYS ILE ILE ARG LYS SER PRO THR SEQRES 6 A 77 ALA GLU GLU PHE VAL THR TYR ARG LEU VAL GLN ASP
HELIX 1 1 ASN A 18 LEU A 29 1 12 HELIX 2 2 ASP A 43 ALA A 48 1 6 HELIX 3 3 ILE A 49 ALA A 51 5 3
SHEET 1 A 3 GLU A 13 LEU A 17 0 SHEET 2 A 3 ILE A 56 SER A 63 -1 O ILE A 56 N LEU A 17 SHEET 3 A 3 GLU A 67 LEU A 74 -1 O GLU A 67 N SER A 63
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000