10 20 30 40 50 60 70 80 1EF0 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 04-FEB-00 1EF0
TITLE CRYSTAL STRUCTURE OF PI-SCEI MINIPRECURSOR
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PI-SCEI ENDONUCLEASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.6.1.34; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: FROM THE VACUOLAR ATPASE SUBUNIT
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PVMA29
KEYWDS ENDONUCLEASE, PROTEIN SPLICING, MINI-PRECURSOR, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR B.W.POLAND,M.-Q.XU,F.A.QUIOCHO
REVDAT 3 24-FEB-09 1EF0 1 VERSN REVDAT 2 01-APR-03 1EF0 1 JRNL REVDAT 1 07-JUN-00 1EF0 0
JRNL AUTH B.W.POLAND,M.Q.XU,F.A.QUIOCHO JRNL TITL STRUCTURAL INSIGHTS INTO THE PROTEIN SPLICING JRNL TITL 2 MECHANISM OF PI-SCEI. JRNL REF J.BIOL.CHEM. V. 275 16408 2000 JRNL REFN ISSN 0021-9258 JRNL PMID 10828056 JRNL DOI 10.1074/JBC.275.22.16408
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH X.DUAN,F.S.GIMBLE,F.A.QUIOCHO REMARK 1 TITL CRYSTAL STRUCTURE OF PI-SCEI, A HOMING REMARK 1 TITL 2 ENDONUCLEASE WITH PROTEIN SPLICING ACTIVITY REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 89 555 1997 REMARK 1 REFN ISSN 0092-8674 REMARK 1 DOI 10.1016/S0092-8674(00)80237-8 REMARK 1 REFERENCE 2 REMARK 1 AUTH P. M.KANE,C.T.YAMASHIRO,D.F.WOLCZYK,N.NEFF,M.GOEBL, REMARK 1 AUTH 2 T.H.STEVENS REMARK 1 TITL PROTEIN SPLICING CONVERTS THE YEAST TFP1 GENE REMARK 1 TITL 2 PRODUCT TO THE 69-KD SUBUNIT OF THE VACUOLAR REMARK 1 TITL 3 H+-ADENOSINE TRIPHOSPHATASE REMARK 1 REF SCIENCE V. 250 651 1990 REMARK 1 REFN ISSN 0036-8075 REMARK 1 REFERENCE 3 REMARK 1 AUTH H.PAULUS REMARK 1 TITL THE CHEMICAL BASIS OF PROTEIN SPLICING. REMARK 1 REF CHEM.SOC.REV. V. 27 375 1998 REMARK 1 REFN ISSN 0306-0012
REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 56914 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 5333 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6475 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 409 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.30 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1EF0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-FEB-00. REMARK 100 THE RCSB ID CODE IS RCSB010512.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-98 REMARK 200 TEMPERATURE (KELVIN) : 100.00 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56914 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 20.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.10100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: XTALVIEW REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, CADMIUM CHLORIDE, REMARK 280 MAGNESIUM CHLORIDE, MERCAPTOETHANOL, TRIC-HCL, PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.84150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 59.00300 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 697 REMARK 465 LEU A 698 REMARK 465 ARG A 91 REMARK 465 LEU A 92 REMARK 465 SER A 93 REMARK 465 ARG A 94 REMARK 465 THR A 95 REMARK 465 ILE A 96 REMARK 465 LYS A 97 REMARK 465 GLY A 98 REMARK 465 VAL A 99 REMARK 465 GLU A 100 REMARK 465 TYR A 101 REMARK 465 PHE A 102 REMARK 465 GLU A 103 REMARK 465 PHE A 198 REMARK 465 HIS A 199 REMARK 465 LEU A 200 REMARK 465 LYS A 269 REMARK 465 VAL A 270 REMARK 465 VAL A 271 REMARK 465 ARG A 272 REMARK 465 GLY A 273 REMARK 465 ASN A 274 REMARK 465 GLY A 275 REMARK 465 ILE A 276 REMARK 465 ARG A 277 REMARK 465 ASN A 278 REMARK 465 ASN A 279 REMARK 465 LEU A 280 REMARK 465 ASN A 281 REMARK 465 THR A 282 REMARK 465 MET A 372 REMARK 465 ASN A 373 REMARK 465 GLY A 456 REMARK 465 GLU A 457 REMARK 465 ARG A 458 REMARK 465 GLN B 55 REMARK 465 HIS B 56 REMARK 465 ARG B 57 REMARK 465 ALA B 58 REMARK 465 HIS B 59 REMARK 465 LYS B 60 REMARK 465 SER B 61 REMARK 465 ASP B 62 REMARK 465 SER B 63 REMARK 465 SER B 64 REMARK 465 ARG B 65 REMARK 465 GLU B 66 REMARK 465 VAL B 67 REMARK 465 PRO B 68 REMARK 465 GLU B 69 REMARK 465 LEU B 70 REMARK 465 THR B 95 REMARK 465 ILE B 96 REMARK 465 LYS B 97 REMARK 465 GLY B 98 REMARK 465 LYS B 195 REMARK 465 SER B 196 REMARK 465 LYS B 197 REMARK 465 PHE B 198 REMARK 465 HIS B 199 REMARK 465 LEU B 200 REMARK 465 THR B 201 REMARK 465 ILE B 202 REMARK 465 GLU B 203 REMARK 465 GLY B 204 REMARK 465 PRO B 205 REMARK 465 LYS B 269 REMARK 465 VAL B 270 REMARK 465 VAL B 271 REMARK 465 ARG B 272 REMARK 465 GLY B 273 REMARK 465 ASN B 274 REMARK 465 GLY B 275 REMARK 465 ILE B 276 REMARK 465 ARG B 277 REMARK 465 ASN B 278 REMARK 465 ASN B 279 REMARK 465 LEU B 280 REMARK 465 ASN B 281 REMARK 465 THR B 282 REMARK 465 GLU B 283 REMARK 465 ASN B 284 REMARK 465 PRO B 285 REMARK 465 LEU B 286 REMARK 465 TRP B 287 REMARK 465 ASP B 288 REMARK 465 ALA B 289 REMARK 465 ILE B 290 REMARK 465 VAL B 291 REMARK 465 ALA B 365 REMARK 465 GLU B 366 REMARK 465 PRO B 367 REMARK 465 ALA B 368 REMARK 465 LYS B 369 REMARK 465 VAL B 370 REMARK 465 ASP B 371 REMARK 465 MET B 372 REMARK 465 ASN B 373 REMARK 465 GLY B 374 REMARK 465 THR B 375 REMARK 465 LYS B 376 REMARK 465 HIS B 377 REMARK 465 LYS B 378
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 56 -138.12 -88.52 REMARK 500 ARG A 57 91.30 78.67 REMARK 500 ALA A 58 -71.85 -169.33 REMARK 500 HIS A 59 99.65 -44.39 REMARK 500 LYS A 60 -17.51 -143.80 REMARK 500 SER A 61 13.59 -163.76 REMARK 500 ASP A 62 -143.56 -109.34 REMARK 500 PHE A 73 155.92 176.40 REMARK 500 ASP A 116 8.62 -62.31 REMARK 500 PRO A 131 133.84 -35.96 REMARK 500 ILE A 132 -171.23 -62.24 REMARK 500 SER A 133 70.52 46.55 REMARK 500 GLU A 134 9.30 157.89 REMARK 500 PRO A 136 -85.29 -37.83 REMARK 500 ARG A 138 -110.61 -58.10 REMARK 500 ASN A 140 -2.75 -56.75 REMARK 500 ASP A 218 50.53 -152.24 REMARK 500 ASN A 247 61.39 71.35 REMARK 500 ALA A 250 125.01 -34.25 REMARK 500 ARG A 255 136.06 82.42 REMARK 500 LYS A 256 -53.05 -174.59 REMARK 500 PRO A 258 74.04 -16.32 REMARK 500 GLN A 259 60.85 61.63 REMARK 500 VAL A 260 -52.79 -149.01 REMARK 500 HIS A 333 48.32 -104.97 REMARK 500 PRO A 408 151.24 -48.59 REMARK 500 ASP A 439 83.76 38.13 REMARK 500 ASP A 441 -8.85 125.73 REMARK 500 GLN A 449 -0.61 72.63 REMARK 500 LEU B 698 98.20 49.35 REMARK 500 GLU B 699 -173.61 169.92 REMARK 500 GLU B 137 -78.38 -32.72 REMARK 500 LYS B 148 0.31 165.94 REMARK 500 MET B 193 75.93 -59.70 REMARK 500 ASP B 218 7.61 -171.73 REMARK 500 LEU B 220 -125.06 -78.40 REMARK 500 SER B 221 -46.16 -163.22 REMARK 500 ALA B 224 59.43 -69.69 REMARK 500 ASP B 232 78.89 179.13 REMARK 500 ASN B 247 75.33 47.12 REMARK 500 ALA B 250 -81.16 -72.67 REMARK 500 GLU B 251 106.13 70.62 REMARK 500 LYS B 253 103.34 -59.55 REMARK 500 ARG B 255 75.37 86.54 REMARK 500 PRO B 258 84.54 -36.84 REMARK 500 VAL B 260 -77.03 -147.60 REMARK 500 THR B 263 143.97 -33.93 REMARK 500 PRO B 304 154.27 -40.22 REMARK 500 ASP B 326 35.11 -158.23 REMARK 500 GLU B 332 -87.33 -10.39 REMARK 500 PRO B 408 155.70 -47.80 REMARK 500 LEU B 426 -151.09 -105.79 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 706 DISTANCE = 5.79 ANGSTROMS REMARK 525 HOH B 777 DISTANCE = 6.64 ANGSTROMS REMARK 525 HOH B 794 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH A 804 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH B 805 DISTANCE = 5.09 ANGSTROMS REMARK 525 HOH A 812 DISTANCE = 7.12 ANGSTROMS REMARK 525 HOH A 821 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH B 827 DISTANCE = 5.44 ANGSTROMS REMARK 525 HOH B 852 DISTANCE = 5.33 ANGSTROMS REMARK 525 HOH A 856 DISTANCE = 6.78 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 442 ND1 REMARK 620 2 HIS A 453 NE2 113.5 REMARK 620 3 CYS A 455 SG 90.5 97.6 REMARK 620 4 HOH A 875 O 76.0 117.5 144.9 REMARK 620 5 GLU A 80 OE1 162.6 61.3 74.5 121.4 REMARK 620 6 HIS A 453 NE2 127.6 33.0 69.0 143.9 38.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 455 SG REMARK 620 2 HIS B 453 NE2 112.8 REMARK 620 3 GLU B 80 OE2 93.8 100.8 REMARK 620 4 HOH B 719 O 119.5 110.9 116.6 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 701 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 701
DBREF 1EF0 A 1 455 GB 172907 AAB63978 244 698 DBREF 1EF0 B 1 455 GB 172907 AAB63978 244 698
SEQADV 1EF0 LYS A 697 GB 172907 SEE REMARK 999 SEQADV 1EF0 LEU A 698 GB 172907 SEE REMARK 999 SEQADV 1EF0 GLU A 699 GB 172907 SEE REMARK 999 SEQADV 1EF0 GLY A 700 GB 172907 SEE REMARK 999 SEQADV 1EF0 ALA A 1 GB 172907 CYS 244 ENGINEERED SEQADV 1EF0 ALA A 454 GB 172907 ASN 697 ENGINEERED SEQADV 1EF0 GLY A 456 GB 172907 SEE REMARK 999 SEQADV 1EF0 GLU A 457 GB 172907 SEE REMARK 999 SEQADV 1EF0 ARG A 458 GB 172907 SEE REMARK 999 SEQADV 1EF0 LYS B 697 GB 172907 SEE REMARK 999 SEQADV 1EF0 LEU B 698 GB 172907 SEE REMARK 999 SEQADV 1EF0 GLU B 699 GB 172907 SEE REMARK 999 SEQADV 1EF0 GLY B 700 GB 172907 SEE REMARK 999 SEQADV 1EF0 ALA B 1 GB 172907 CYS 244 ENGINEERED SEQADV 1EF0 ALA B 454 GB 172907 ASN 697 ENGINEERED SEQADV 1EF0 GLY B 456 GB 172907 SEE REMARK 999 SEQADV 1EF0 GLU B 457 GB 172907 SEE REMARK 999 SEQADV 1EF0 ARG B 458 GB 172907 SEE REMARK 999
SEQRES 1 A 462 LYS LEU GLU GLY ALA PHE ALA LYS GLY THR ASN VAL LEU SEQRES 2 A 462 MET ALA ASP GLY SER ILE GLU CYS ILE GLU ASN ILE GLU SEQRES 3 A 462 VAL GLY ASN LYS VAL MET GLY LYS ASP GLY ARG PRO ARG SEQRES 4 A 462 GLU VAL ILE LYS LEU PRO ARG GLY ARG GLU THR MET TYR SEQRES 5 A 462 SER VAL VAL GLN LYS SER GLN HIS ARG ALA HIS LYS SER SEQRES 6 A 462 ASP SER SER ARG GLU VAL PRO GLU LEU LEU LYS PHE THR SEQRES 7 A 462 CYS ASN ALA THR HIS GLU LEU VAL VAL ARG THR PRO ARG SEQRES 8 A 462 SER VAL ARG ARG LEU SER ARG THR ILE LYS GLY VAL GLU SEQRES 9 A 462 TYR PHE GLU VAL ILE THR PHE GLU MET GLY GLN LYS LYS SEQRES 10 A 462 ALA PRO ASP GLY ARG ILE VAL GLU LEU VAL LYS GLU VAL SEQRES 11 A 462 SER LYS SER TYR PRO ILE SER GLU GLY PRO GLU ARG ALA SEQRES 12 A 462 ASN GLU LEU VAL GLU SER TYR ARG LYS ALA SER ASN LYS SEQRES 13 A 462 ALA TYR PHE GLU TRP THR ILE GLU ALA ARG ASP LEU SER SEQRES 14 A 462 LEU LEU GLY SER HIS VAL ARG LYS ALA THR TYR GLN THR SEQRES 15 A 462 TYR ALA PRO ILE LEU TYR GLU ASN ASP HIS PHE PHE ASP SEQRES 16 A 462 TYR MET GLN LYS SER LYS PHE HIS LEU THR ILE GLU GLY SEQRES 17 A 462 PRO LYS VAL LEU ALA TYR LEU LEU GLY LEU TRP ILE GLY SEQRES 18 A 462 ASP GLY LEU SER ASP ARG ALA THR PHE SER VAL ASP SER SEQRES 19 A 462 ARG ASP THR SER LEU MET GLU ARG VAL THR GLU TYR ALA SEQRES 20 A 462 GLU LYS LEU ASN LEU CYS ALA GLU TYR LYS ASP ARG LYS SEQRES 21 A 462 GLU PRO GLN VAL ALA LYS THR VAL ASN LEU TYR SER LYS SEQRES 22 A 462 VAL VAL ARG GLY ASN GLY ILE ARG ASN ASN LEU ASN THR SEQRES 23 A 462 GLU ASN PRO LEU TRP ASP ALA ILE VAL GLY LEU GLY PHE SEQRES 24 A 462 LEU LYS ASP GLY VAL LYS ASN ILE PRO SER PHE LEU SER SEQRES 25 A 462 THR ASP ASN ILE GLY THR ARG GLU THR PHE LEU ALA GLY SEQRES 26 A 462 LEU ILE ASP SER ASP GLY TYR VAL THR ASP GLU HIS GLY SEQRES 27 A 462 ILE LYS ALA THR ILE LYS THR ILE HIS THR SER VAL ARG SEQRES 28 A 462 ASP GLY LEU VAL SER LEU ALA ARG SER LEU GLY LEU VAL SEQRES 29 A 462 VAL SER VAL ASN ALA GLU PRO ALA LYS VAL ASP MET ASN SEQRES 30 A 462 GLY THR LYS HIS LYS ILE SER TYR ALA ILE TYR MET SER SEQRES 31 A 462 GLY GLY ASP VAL LEU LEU ASN VAL LEU SER LYS CYS ALA SEQRES 32 A 462 GLY SER LYS LYS PHE ARG PRO ALA PRO ALA ALA ALA PHE SEQRES 33 A 462 ALA ARG GLU CYS ARG GLY PHE TYR PHE GLU LEU GLN GLU SEQRES 34 A 462 LEU LYS GLU ASP ASP TYR TYR GLY ILE THR LEU SER ASP SEQRES 35 A 462 ASP SER ASP HIS GLN PHE LEU LEU ALA ASN GLN VAL VAL SEQRES 36 A 462 VAL HIS ALA CYS GLY GLU ARG SEQRES 1 B 462 LYS LEU GLU GLY ALA PHE ALA LYS GLY THR ASN VAL LEU SEQRES 2 B 462 MET ALA ASP GLY SER ILE GLU CYS ILE GLU ASN ILE GLU SEQRES 3 B 462 VAL GLY ASN LYS VAL MET GLY LYS ASP GLY ARG PRO ARG SEQRES 4 B 462 GLU VAL ILE LYS LEU PRO ARG GLY ARG GLU THR MET TYR SEQRES 5 B 462 SER VAL VAL GLN LYS SER GLN HIS ARG ALA HIS LYS SER SEQRES 6 B 462 ASP SER SER ARG GLU VAL PRO GLU LEU LEU LYS PHE THR SEQRES 7 B 462 CYS ASN ALA THR HIS GLU LEU VAL VAL ARG THR PRO ARG SEQRES 8 B 462 SER VAL ARG ARG LEU SER ARG THR ILE LYS GLY VAL GLU SEQRES 9 B 462 TYR PHE GLU VAL ILE THR PHE GLU MET GLY GLN LYS LYS SEQRES 10 B 462 ALA PRO ASP GLY ARG ILE VAL GLU LEU VAL LYS GLU VAL SEQRES 11 B 462 SER LYS SER TYR PRO ILE SER GLU GLY PRO GLU ARG ALA SEQRES 12 B 462 ASN GLU LEU VAL GLU SER TYR ARG LYS ALA SER ASN LYS SEQRES 13 B 462 ALA TYR PHE GLU TRP THR ILE GLU ALA ARG ASP LEU SER SEQRES 14 B 462 LEU LEU GLY SER HIS VAL ARG LYS ALA THR TYR GLN THR SEQRES 15 B 462 TYR ALA PRO ILE LEU TYR GLU ASN ASP HIS PHE PHE ASP SEQRES 16 B 462 TYR MET GLN LYS SER LYS PHE HIS LEU THR ILE GLU GLY SEQRES 17 B 462 PRO LYS VAL LEU ALA TYR LEU LEU GLY LEU TRP ILE GLY SEQRES 18 B 462 ASP GLY LEU SER ASP ARG ALA THR PHE SER VAL ASP SER SEQRES 19 B 462 ARG ASP THR SER LEU MET GLU ARG VAL THR GLU TYR ALA SEQRES 20 B 462 GLU LYS LEU ASN LEU CYS ALA GLU TYR LYS ASP ARG LYS SEQRES 21 B 462 GLU PRO GLN VAL ALA LYS THR VAL ASN LEU TYR SER LYS SEQRES 22 B 462 VAL VAL ARG GLY ASN GLY ILE ARG ASN ASN LEU ASN THR SEQRES 23 B 462 GLU ASN PRO LEU TRP ASP ALA ILE VAL GLY LEU GLY PHE SEQRES 24 B 462 LEU LYS ASP GLY VAL LYS ASN ILE PRO SER PHE LEU SER SEQRES 25 B 462 THR ASP ASN ILE GLY THR ARG GLU THR PHE LEU ALA GLY SEQRES 26 B 462 LEU ILE ASP SER ASP GLY TYR VAL THR ASP GLU HIS GLY SEQRES 27 B 462 ILE LYS ALA THR ILE LYS THR ILE HIS THR SER VAL ARG SEQRES 28 B 462 ASP GLY LEU VAL SER LEU ALA ARG SER LEU GLY LEU VAL SEQRES 29 B 462 VAL SER VAL ASN ALA GLU PRO ALA LYS VAL ASP MET ASN SEQRES 30 B 462 GLY THR LYS HIS LYS ILE SER TYR ALA ILE TYR MET SER SEQRES 31 B 462 GLY GLY ASP VAL LEU LEU ASN VAL LEU SER LYS CYS ALA SEQRES 32 B 462 GLY SER LYS LYS PHE ARG PRO ALA PRO ALA ALA ALA PHE SEQRES 33 B 462 ALA ARG GLU CYS ARG GLY PHE TYR PHE GLU LEU GLN GLU SEQRES 34 B 462 LEU LYS GLU ASP ASP TYR TYR GLY ILE THR LEU SER ASP SEQRES 35 B 462 ASP SER ASP HIS GLN PHE LEU LEU ALA ASN GLN VAL VAL SEQRES 36 B 462 VAL HIS ALA CYS GLY GLU ARG
HET ZN B 701 1 HET ZN A 701 2
HETNAM ZN ZINC ION
FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *408(H2 O)
HELIX 1 1 GLU A 19 ILE A 21 5 3 HELIX 2 2 ALA A 139 SER A 150 1 12 HELIX 3 3 ARG A 162 LEU A 167 5 6 HELIX 4 4 GLY A 168 THR A 175 1 8 HELIX 5 5 ASP A 187 SER A 196 1 10 HELIX 6 6 GLU A 203 GLY A 219 1 17 HELIX 7 7 ASP A 232 LEU A 246 1 15 HELIX 8 8 ASN A 284 LEU A 293 1 10 HELIX 9 9 PRO A 304 ASP A 310 5 7 HELIX 10 10 ASN A 311 ASP A 326 1 16 HELIX 11 11 HIS A 343 LEU A 357 1 15 HELIX 12 12 GLY A 388 SER A 396 1 9 HELIX 13 13 GLU B 19 ILE B 21 5 3 HELIX 14 14 SER B 133 GLY B 135 5 3 HELIX 15 15 PRO B 136 ARG B 147 1 12 HELIX 16 16 ARG B 162 LEU B 167 5 6 HELIX 17 17 GLY B 168 THR B 175 1 8 HELIX 18 18 ASP B 187 MET B 193 1 7 HELIX 19 19 LYS B 206 GLY B 219 1 14 HELIX 20 20 ASP B 232 LYS B 245 1 14 HELIX 21 21 SER B 305 THR B 309 5 5 HELIX 22 22 ASN B 311 GLY B 327 1 17 HELIX 23 23 HIS B 343 LEU B 357 1 15 HELIX 24 24 GLY B 388 SER B 396 1 9
SHEET 1 A 2 ASN A 7 LEU A 9 0 SHEET 2 A 2 ILE A 15 CYS A 17 -1 O GLU A 16 N VAL A 8 SHEET 1 B 3 LYS A 26 MET A 28 0 SHEET 2 B 3 PRO A 34 LYS A 39 -1 O ARG A 35 N VAL A 27 SHEET 3 B 3 THR A 435 LEU A 436 -1 O THR A 435 N ILE A 38 SHEET 1 C 3 LYS A 72 ASN A 76 0 SHEET 2 C 3 ARG A 42 GLN A 52 -1 N TYR A 48 O CYS A 75 SHEET 3 C 3 PHE A 421 TYR A 432 -1 N GLU A 422 O VAL A 51 SHEET 1 D 4 TYR A 154 GLU A 160 0 SHEET 2 D 4 GLU A 80 PRO A 86 -1 N LEU A 81 O ILE A 159 SHEET 3 D 4 TYR A 176 TYR A 179 -1 N TYR A 176 O ARG A 84 SHEET 4 D 4 ARG A 417 PHE A 419 -1 N ARG A 417 O TYR A 179 SHEET 1 E 2 ILE A 105 LYS A 113 0 SHEET 2 E 2 ILE A 119 SER A 127 -1 N VAL A 120 O LYS A 112 SHEET 1 F 3 THR A 225 ASP A 229 0 SHEET 2 F 3 ALA A 261 ASN A 265 -1 O LYS A 262 N VAL A 228 SHEET 3 F 3 GLU A 251 LYS A 253 -1 N GLU A 251 O ASN A 265 SHEET 1 G 2 LEU A 296 LYS A 297 0 SHEET 2 G 2 VAL A 300 LYS A 301 -1 O VAL A 300 N LYS A 297 SHEET 1 H 4 GLY A 327 THR A 330 0 SHEET 2 H 4 LYS A 336 THR A 341 -1 O LYS A 336 N THR A 330 SHEET 3 H 4 ILE A 379 SER A 386 -1 N TYR A 381 O THR A 341 SHEET 4 H 4 VAL A 360 PRO A 367 -1 N VAL A 360 O SER A 386 SHEET 1 I 2 GLN A 443 LEU A 445 0 SHEET 2 I 2 VAL A 451 HIS A 453 -1 N VAL A 452 O PHE A 444 SHEET 1 J 8 GLY B 456 GLU B 457 0 SHEET 2 J 8 PHE B 421 SER B 437 1 O LEU B 436 N GLU B 457 SHEET 3 J 8 ARG B 42 GLN B 52 -1 O GLY B 43 N TYR B 431 SHEET 4 J 8 LYS B 72 ASN B 76 -1 O PHE B 73 N VAL B 50 SHEET 5 J 8 GLY B 700 PHE B 2 -1 O ALA B 1 N ASN B 76 SHEET 6 J 8 PHE B 421 SER B 437 -1 N TYR B 432 O PHE B 2 SHEET 7 J 8 PRO B 34 LYS B 39 -1 O GLU B 36 N SER B 437 SHEET 8 J 8 LYS B 26 MET B 28 -1 N VAL B 27 O ARG B 35 SHEET 1 K 2 ASN B 7 LEU B 9 0 SHEET 2 K 2 ILE B 15 CYS B 17 -1 O GLU B 16 N VAL B 8 SHEET 1 L 4 TYR B 154 GLU B 160 0 SHEET 2 L 4 GLU B 80 PRO B 86 -1 N LEU B 81 O ILE B 159 SHEET 3 L 4 TYR B 176 TYR B 179 -1 N TYR B 176 O ARG B 84 SHEET 4 L 4 ARG B 417 PHE B 419 -1 N ARG B 417 O TYR B 179 SHEET 1 M 3 VAL B 89 SER B 93 0 SHEET 2 M 3 TYR B 101 LYS B 113 -1 N GLU B 103 O LEU B 92 SHEET 3 M 3 ILE B 119 PRO B 131 -1 N VAL B 120 O LYS B 112 SHEET 1 N 2 THR B 225 PHE B 226 0 SHEET 2 N 2 VAL B 264 ASN B 265 -1 O VAL B 264 N PHE B 226 SHEET 1 O 2 LEU B 296 LYS B 297 0 SHEET 2 O 2 VAL B 300 LYS B 301 -1 N VAL B 300 O LYS B 297 SHEET 1 P 4 TYR B 328 THR B 330 0 SHEET 2 P 4 LYS B 336 THR B 341 -1 O LYS B 336 N THR B 330 SHEET 3 P 4 TYR B 381 SER B 386 -1 N TYR B 381 O THR B 341 SHEET 4 P 4 VAL B 360 ASN B 364 -1 N VAL B 360 O SER B 386 SHEET 1 Q 2 GLN B 443 LEU B 445 0 SHEET 2 Q 2 VAL B 451 HIS B 453 -1 N VAL B 452 O PHE B 444
LINK ZN A ZN A 701 ND1AHIS A 442 1555 1555 2.34 LINK ZN A ZN A 701 NE2AHIS A 453 1555 1555 2.42 LINK ZN A ZN A 701 SG ACYS A 455 1555 1555 1.84 LINK ZN A ZN A 701 O AHOH A 875 1555 1555 2.12 LINK ZN B ZN A 701 OE1BGLU A 80 1555 1555 2.49 LINK ZN B ZN A 701 NE2BHIS A 453 1555 1555 2.42 LINK ZN ZN B 701 SG CYS B 455 1555 1555 2.50 LINK ZN ZN B 701 NE2 HIS B 453 1555 1555 2.47 LINK ZN ZN B 701 OE2 GLU B 80 1555 1555 2.21 LINK ZN ZN B 701 O HOH B 719 1555 1555 2.38
SITE 1 AC1 5 ILE A 379 GLU B 80 HIS B 453 CYS B 455 SITE 2 AC1 5 HOH B 719 SITE 1 AC2 5 GLU A 80 HIS A 442 HIS A 453 CYS A 455 SITE 2 AC2 5 HOH A 875
CRYST1 59.003 101.683 86.765 90.00 93.51 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016948 0.000000 0.001040 0.00000
SCALE2 0.000000 0.009834 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011547 0.00000