10 20 30 40 50 60 70 80 1E0G - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 27-MAR-00 1E0G
TITLE LYSM DOMAIN FROM E.COLI MLTD
COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE D; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LYSM DOMAIN; COMPND 5 SYNONYM: MLTD, MUREIN HYDROLASE D, REGULATORY PROTEIN DNIR
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 4 ORGANISM_TAXID: 562
KEYWDS CELL WALL, HYDROLASE, GLYCOSIDASE, LIPOPROTEIN, OUTER KEYWDS 2 MEMBRANE, MULTIGENE FAMILY
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR A.BATEMAN,M.BYCROFT
REVDAT 4 24-FEB-09 1E0G 1 VERSN REVDAT 3 05-NOV-03 1E0G 1 SPRSDE REMARK REVDAT 2 06-JUN-02 1E0G 1 JRNL REVDAT 1 21-JUN-00 1E0G 0
SPRSDE 05-NOV-03 1E0G 1E01
JRNL AUTH A.BATEMAN,M.BYCROFT JRNL TITL THE STRUCTURE OF A LYSM DOMAIN FROM E.COLI JRNL TITL 2 MEMBRANE BOUND LYTIC MUREIN TRANSGLYCOSYLASE D JRNL TITL 3 (MLTD) JRNL REF J.MOL.BIOL. V. 299 1113 2000 JRNL REFN ISSN 0022-2836 JRNL PMID 10843862 JRNL DOI 10.1006/JMBI.2000.3778
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH N.K.BIRKELAND REMARK 1 TITL CLONING, MOLECULAR CHARACTERIZATION, AND REMARK 1 TITL 2 EXPRESSION OF THE GENES ENCODING THE LYTIC REMARK 1 TITL 3 FUNCTIONS OF LACTOCOCCAL BACTERIOPHAGE-PHI-LC3; A REMARK 1 TITL 4 DUAL LYSIS SYSTEM OF MODULAR DESIGN REMARK 1 REF CAN.J.MICROBIOL. V. 40 658 1994 REMARK 1 REFN ISSN 0008-4166 REMARK 1 PMID 7922887
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SA FROM RANDOM COIL STARTING REMARK 3 STRUCTURES
REMARK 4 REMARK 4 1E0G COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAR-00. REMARK 100 THE PDBE ID CODE IS EBI-4771.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : 500 REMARK 210 SPECTROMETER MODEL : AMX500 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XPLOR REMARK 210 METHOD USED : SA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE REMARK 210 NMR SPECTROSCOPY ON 13C, 15N-LABELED MTLD LYSM DOMAIN
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HA SER A 14 - HG13 ILE A 24 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 45 55.32 -117.02 REMARK 500 1 VAL A 47 143.39 -39.57 REMARK 500 2 LEU A 45 55.09 -115.05 REMARK 500 2 VAL A 47 141.57 -39.43 REMARK 500 3 SER A 32 -82.69 -89.68 REMARK 500 3 THR A 34 42.36 -88.20 REMARK 500 3 LEU A 45 55.13 -110.62 REMARK 500 3 VAL A 47 144.65 -39.64 REMARK 500 4 THR A 34 32.61 -86.97 REMARK 500 4 LEU A 45 55.53 -109.02 REMARK 500 4 VAL A 47 142.87 -37.94 REMARK 500 5 VAL A 47 139.04 -39.59 REMARK 500 6 SER A 32 -81.92 -87.04 REMARK 500 6 THR A 34 43.78 -89.82 REMARK 500 6 VAL A 47 140.06 -39.40 REMARK 500 7 SER A 32 -82.83 -93.13 REMARK 500 7 THR A 34 48.39 -84.37 REMARK 500 7 LEU A 45 55.20 -110.78 REMARK 500 7 VAL A 47 142.88 -38.94 REMARK 500 8 THR A 34 32.48 -89.13 REMARK 500 8 VAL A 47 138.15 -37.21 REMARK 500 9 THR A 34 41.08 -86.99 REMARK 500 9 VAL A 47 143.12 -38.24 REMARK 500 10 SER A 32 -82.12 -92.31 REMARK 500 10 THR A 34 41.64 -87.12 REMARK 500 10 LEU A 45 54.52 -117.73 REMARK 500 10 VAL A 47 137.30 -38.39 REMARK 500 11 SER A 32 -81.32 -91.00 REMARK 500 11 THR A 34 41.08 -86.22 REMARK 500 11 LEU A 45 54.00 -115.02 REMARK 500 11 VAL A 47 137.46 -38.53 REMARK 500 13 SER A 32 -78.72 -92.45 REMARK 500 13 THR A 34 47.06 -84.84 REMARK 500 13 LEU A 45 54.53 -118.38 REMARK 500 13 VAL A 47 137.49 -39.00 REMARK 500 14 SER A 32 -82.53 -94.42 REMARK 500 14 THR A 34 47.57 -84.29 REMARK 500 14 LEU A 45 54.59 -116.70 REMARK 500 15 SER A 32 -83.03 -92.68 REMARK 500 15 THR A 34 48.05 -83.39 REMARK 500 15 LEU A 45 56.43 -113.91 REMARK 500 16 SER A 32 -81.95 -88.39 REMARK 500 16 THR A 34 43.36 -86.17 REMARK 500 16 LEU A 45 54.78 -111.67 REMARK 500 17 SER A 32 -80.98 -97.29 REMARK 500 17 ASP A 33 94.14 -69.58 REMARK 500 17 THR A 34 49.43 -87.28 REMARK 500 17 LEU A 45 55.49 -117.20 REMARK 500 17 VAL A 47 140.28 -39.36 REMARK 500 18 VAL A 47 138.95 -38.97 REMARK 500 19 SER A 32 -78.31 -98.69 REMARK 500 19 ASP A 33 92.52 -68.08 REMARK 500 19 THR A 34 49.43 -83.57 REMARK 500 19 LEU A 45 54.37 -117.65 REMARK 500 19 VAL A 47 138.80 -39.17 REMARK 500 20 VAL A 47 141.09 -37.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 6 0.29 SIDE CHAIN REMARK 500 1 ARG A 8 0.30 SIDE CHAIN REMARK 500 1 ARG A 19 0.31 SIDE CHAIN REMARK 500 1 ARG A 29 0.30 SIDE CHAIN REMARK 500 2 ARG A 6 0.29 SIDE CHAIN REMARK 500 2 ARG A 8 0.29 SIDE CHAIN REMARK 500 2 ARG A 19 0.13 SIDE CHAIN REMARK 500 2 ARG A 29 0.26 SIDE CHAIN REMARK 500 3 ARG A 6 0.31 SIDE CHAIN REMARK 500 3 ARG A 8 0.32 SIDE CHAIN REMARK 500 3 ARG A 19 0.14 SIDE CHAIN REMARK 500 3 ARG A 29 0.26 SIDE CHAIN REMARK 500 4 ARG A 6 0.32 SIDE CHAIN REMARK 500 4 ARG A 8 0.24 SIDE CHAIN REMARK 500 4 ARG A 19 0.26 SIDE CHAIN REMARK 500 4 ARG A 29 0.31 SIDE CHAIN REMARK 500 5 ARG A 6 0.32 SIDE CHAIN REMARK 500 5 ARG A 8 0.27 SIDE CHAIN REMARK 500 5 ARG A 19 0.24 SIDE CHAIN REMARK 500 5 ARG A 29 0.28 SIDE CHAIN REMARK 500 6 ARG A 6 0.32 SIDE CHAIN REMARK 500 6 ARG A 8 0.32 SIDE CHAIN REMARK 500 6 ARG A 19 0.25 SIDE CHAIN REMARK 500 6 ARG A 29 0.31 SIDE CHAIN REMARK 500 7 ARG A 6 0.26 SIDE CHAIN REMARK 500 7 ARG A 8 0.22 SIDE CHAIN REMARK 500 7 ARG A 19 0.22 SIDE CHAIN REMARK 500 7 ARG A 29 0.23 SIDE CHAIN REMARK 500 8 ARG A 6 0.25 SIDE CHAIN REMARK 500 8 ARG A 8 0.31 SIDE CHAIN REMARK 500 8 ARG A 19 0.28 SIDE CHAIN REMARK 500 8 ARG A 29 0.24 SIDE CHAIN REMARK 500 9 ARG A 6 0.30 SIDE CHAIN REMARK 500 9 ARG A 8 0.28 SIDE CHAIN REMARK 500 9 ARG A 19 0.25 SIDE CHAIN REMARK 500 9 ARG A 29 0.29 SIDE CHAIN REMARK 500 10 ARG A 6 0.29 SIDE CHAIN REMARK 500 10 ARG A 8 0.30 SIDE CHAIN REMARK 500 10 ARG A 19 0.30 SIDE CHAIN REMARK 500 10 ARG A 29 0.23 SIDE CHAIN REMARK 500 11 ARG A 6 0.22 SIDE CHAIN REMARK 500 11 ARG A 8 0.19 SIDE CHAIN REMARK 500 11 ARG A 19 0.21 SIDE CHAIN REMARK 500 11 ARG A 29 0.32 SIDE CHAIN REMARK 500 12 ARG A 6 0.26 SIDE CHAIN REMARK 500 12 ARG A 8 0.31 SIDE CHAIN REMARK 500 12 ARG A 19 0.23 SIDE CHAIN REMARK 500 12 ARG A 29 0.24 SIDE CHAIN REMARK 500 13 ARG A 6 0.23 SIDE CHAIN REMARK 500 13 ARG A 8 0.32 SIDE CHAIN REMARK 500 13 ARG A 19 0.11 SIDE CHAIN REMARK 500 13 ARG A 29 0.30 SIDE CHAIN REMARK 500 14 ARG A 6 0.27 SIDE CHAIN REMARK 500 14 ARG A 8 0.31 SIDE CHAIN REMARK 500 14 ARG A 19 0.30 SIDE CHAIN REMARK 500 14 ARG A 29 0.21 SIDE CHAIN REMARK 500 15 ARG A 6 0.22 SIDE CHAIN REMARK 500 15 ARG A 8 0.24 SIDE CHAIN REMARK 500 15 ARG A 19 0.28 SIDE CHAIN REMARK 500 15 ARG A 29 0.31 SIDE CHAIN REMARK 500 16 ARG A 6 0.31 SIDE CHAIN REMARK 500 16 ARG A 8 0.29 SIDE CHAIN REMARK 500 16 ARG A 19 0.28 SIDE CHAIN REMARK 500 16 ARG A 29 0.21 SIDE CHAIN REMARK 500 17 ARG A 6 0.15 SIDE CHAIN REMARK 500 17 ARG A 8 0.31 SIDE CHAIN REMARK 500 17 ARG A 19 0.28 SIDE CHAIN REMARK 500 17 ARG A 29 0.29 SIDE CHAIN REMARK 500 18 ARG A 6 0.25 SIDE CHAIN REMARK 500 18 ARG A 8 0.11 SIDE CHAIN REMARK 500 18 ARG A 19 0.12 SIDE CHAIN REMARK 500 18 ARG A 29 0.32 SIDE CHAIN REMARK 500 19 ARG A 6 0.32 SIDE CHAIN REMARK 500 19 ARG A 8 0.22 SIDE CHAIN REMARK 500 19 ARG A 19 0.26 SIDE CHAIN REMARK 500 19 ARG A 29 0.28 SIDE CHAIN REMARK 500 20 ARG A 6 0.20 SIDE CHAIN REMARK 500 20 ARG A 8 0.30 SIDE CHAIN REMARK 500 20 ARG A 19 0.29 SIDE CHAIN REMARK 500 20 ARG A 29 0.23 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL
DBREF 1E0G A 1 48 UNP P23931 MLTD_ECOLI 398 445
SEQRES 1 A 48 ASP SER ILE THR TYR ARG VAL ARG LYS GLY ASP SER LEU SEQRES 2 A 48 SER SER ILE ALA LYS ARG HIS GLY VAL ASN ILE LYS ASP SEQRES 3 A 48 VAL MET ARG TRP ASN SER ASP THR ALA ASN LEU GLN PRO SEQRES 4 A 48 GLY ASP LYS LEU THR LEU PHE VAL LYS
HELIX 1 1 SER A 12 HIS A 20 1 9 HELIX 2 2 ASN A 23 ASN A 31 1 9 HELIX 3 3 ASP A 33 LEU A 37 5 5
SHEET 1 A 2 THR A 4 VAL A 7 0 SHEET 2 A 2 ASP A 41 THR A 44 -1 N LEU A 43 O TYR A 5
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000