10 20 30 40 50 60 70 80 1DY4 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 26-JAN-00 1DY4
TITLE CBH1 IN COMPLEX WITH S-PROPRANOLOL
COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXOGLUCANASE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, RESIDUES 18-451; COMPND 5 SYNONYM: CELLOBIOHYDROLASE I, CEL7A, EXOCELLULASE, 1,4-BETA- COMPND 6 CELLOBIOHYDROLASE, EXOCELLOBIOHYDROLASE I, CBHI, EXOGLUCANASE I; COMPND 7 EC: 3.2.1.91
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRICHODERMA REESEI; SOURCE 3 ORGANISM_TAXID: 334564; SOURCE 4 STRAIN: QM9414
KEYWDS HYDROLASE(O-GLYCOSYL), HYDROLASE, CELLULOSE DEAGRADATION, CHIRAL KEYWDS 2 SEPARATION, GLYCOSIDASE, GLYCOPROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR J.STAHLBERG,H.HENRIKSSON,C.DIVNE,R.ISAKSSON,G.PETTERSSON,G.JOHANSSON, AUTHOR 2 T.A.JONES
REVDAT 6 05-JUL-17 1DY4 1 REMARK REVDAT 5 12-FEB-14 1DY4 1 SOURCE REVDAT 4 20-JUL-11 1DY4 1 VERSN REVDAT REMARK REVDAT 3 13-JUL-11 1DY4 1 VERSN REVDAT 2 24-FEB-09 1DY4 1 VERSN REVDAT 1 18-DEC-00 1DY4 0
JRNL AUTH J.STAHLBERG,H.HENRIKSSON,C.DIVNE,R.ISAKSSON,G.PETTERSSON, JRNL AUTH 2 G.JOHANSSON,T.A.JONES JRNL TITL STRUCTURAL BASIS FOR ENANTIOMER BINDING AND SEPARATION OF A JRNL TITL 2 COMMON BETA-BLOCKER: CRYSTAL STRUCTURE OF CELLOBIOHYDROLASE JRNL TITL 3 CEL7A WITH BOUND (S)-PROPRANOLOL AT 1.9 A RESOLUTION JRNL REF J.MOL.BIOL. V. 305 79 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11114249 JRNL DOI 10.1006/JMBI.2000.4237
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.DIVNE,J.STAHLBERG,T.T.TEERI,T.A.JONES REMARK 1 TITL HIGH-RESOLUTION CRYSTAL STRUCTURES REVEAL HOW A CELLULOSE REMARK 1 TITL 2 CHAIN IS BOUND IN THE 50A LONG TUNNEL OF CELLOBIOHYDROLASE I REMARK 1 TITL 3 FROM TRICHODERMA REESEI REMARK 1 REF J.MOL.BIOL. V. 275 309 1998 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 9466911 REMARK 1 DOI 10.1006/JMBI.1997.1437 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.DIVNE,J.STAHLBERG,T.REINIKAINEN,L.RUOHONEN,G.PETTERSSON, REMARK 1 AUTH 2 J.K.KNOWLES,T.T.TEERI,T.A.JONES REMARK 1 TITL THE THREE-DIMENSIONAL CRYSTAL STRUCTURE OF THE CATALYTIC REMARK 1 TITL 2 CORE OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI REMARK 1 REF SCIENCE V. 265 524 1994 REMARK 1 REFN ISSN 0036-8075 REMARK 1 PMID 8036495 REMARK 1 DOI 10.1126/SCIENCE.8036495
REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 30516 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3220 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 342 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1DY4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-JAN-00. REMARK 100 THE DEPOSITION ID IS D_1290004558.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH2R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE(002) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : R-AXIS IIC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30518 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 33.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.30 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 32.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.09500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 12.30 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS 1.0 REMARK 200 STARTING MODEL: PDB ENTRY 5CEL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HANGING DROPS. EQUAL VOLUMES OF 9 REMARK 280 MG/ML PROTEIN/7.5 MM S-PROPRANOLOL AND RESERVOIR SOLUTION REMARK 280 CONTAINING 0.1 M MES (PH 7.0), 24% (W/V) MONOMETHYL ETHER PEG REMARK 280 5000, 15% GLYCEROL AND 10 MM COCL2., PH 7.00
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.48000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.55500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.34000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 41.48000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.55500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.34000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.48000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.55500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.34000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 41.48000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 41.55500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 55.34000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CO CO A 470 LIES ON A SPECIAL POSITION.
REMARK 400 REMARK 400 COMPOUND REMARK 400 THE I222 CRYSTAL FORM DESCRIBED HERE REPRESENTS THE HIGHER REMARK 400 SYMMETRY EQUIVALENT TO THE PSEUDO-I222 PRIMITIVE REMARK 400 ORTHORHOMBIC CELL DESCRIBED PREVIOUSLY IN ENTRY 1CEL. REMARK 400 REMARK 400 THE COORDINATES GIVEN DEFINE THE STRUCTURE OF ONLY THE REMARK 400 CATALYTIC DOMAIN (RESIDUES 1 - 434) OF THE 497 RESIDUES IN REMARK 400 THE MATURE PROTEIN. THE N-TERMINUS IS PROTECTED BY A REMARK 400 PYROGLUTAMATE RESIDUE.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 209 CA - CB - SG ANGL. DEV. = 8.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 99 -125.44 -123.92 REMARK 500 CYS A 210 163.22 178.71 REMARK 500 SER A 379 -153.64 -134.42 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 470 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 295 OE1 REMARK 620 2 GLU A 295 OE2 104.1 REMARK 620 3 GLU A 295 OE1 104.4 0.6 REMARK 620 4 GLU A 295 OE2 54.7 60.2 60.2 REMARK 620 5 GLU A 325 OE2 104.5 1.3 0.8 59.9 REMARK 620 6 GLU A 325 OE2 84.2 132.5 132.0 91.5 131.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 471 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 239 OE2 REMARK 620 2 HIS A 206 NE2 84.5 REMARK 620 N 1
REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: REMARK 700 THERE IS A BIFURCATED SHEET IN THIS STRUCTURE. REMARK 700 THIS IS REPRESENTED BY TWO SHEETS WHICH HAVE ONE OR MORE REMARK 700 IDENTICAL STRANDS. REMARK 700 SHEETS A AND A1 REPRESENT ONE BIFURCATED SHEET.
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 435 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 436 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SNP A 437 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 470 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 471
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1CEL RELATED DB: PDB REMARK 900 1,4-BETA-D-GLUCAN CELLOBIOHYDROLASE I (CELLULASE) FUNGUS REMARK 900 (TRICHODERMA REESEI) REMARK 900 RELATED ID: 2CEL RELATED DB: PDB REMARK 900 ACTIVE-SITE MUTANT E212Q DETERMINED AT PH 6.0 WITH NO LIGAND BOUND REMARK 900 IN THE ACTIVE SITE REMARK 900 RELATED ID: 3CEL RELATED DB: PDB REMARK 900 ACTIVE-SITE MUTANT E212Q DETERMINED AT PH 6.0 WITH CELLOBIOSE BOUND REMARK 900 IN THE ACTIVE SITE REMARK 900 RELATED ID: 4CEL RELATED DB: PDB REMARK 900 ACTIVE-SITE MUTANT D214N DETERMINED AT PH 6.0 WITH NO LIGAND BOUND REMARK 900 IN THE ACTIVE SITE REMARK 900 RELATED ID: 5CEL RELATED DB: PDB REMARK 900 CBH1 (E212Q) CELLOTETRAOSE COMPLEX REMARK 900 RELATED ID: 6CEL RELATED DB: PDB REMARK 900 CBH1 (E212Q) CELLOPENTAOSE COMPLEX REMARK 900 RELATED ID: 7CEL RELATED DB: PDB REMARK 900 CBH1 (E217Q) IN COMPLEX WITH CELLOHEXAOSE AND CELLOBIOSE REMARK 900 RELATED ID: 8CEL RELATED DB: PDB REMARK 900 THEORETICAL MODEL OF CBH1 IN COMPLEX WITH A CELLULOSE NANOMERIC REMARK 900 RELATED ID: 1CBH RELATED DB: PDB REMARK 900 C-TERMINAL DOMAIN OF CELLOBIOHYDROLASE I (CT-CBH I) (E.C.3.2.1.91) REMARK 900 (NMR, MINIMIZED MEAN STRUCTURE) REMARK 900 RELATED ID: 2CBH RELATED DB: PDB REMARK 900 C-TERMINAL DOMAIN OF CELLOBIOHYDROLASE I (CT-CBH I) (E.C.3.2.1.91) REMARK 900 (NMR,41 SIMULATED ANNEALING STRUCTURES) REMARK 900 RELATED ID: 1AZ6 RELATED DB: PDB REMARK 900 THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING REMARK 900 DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 23 REMARK 900 STRUCTURES REMARK 900 RELATED ID: 1AZH RELATED DB: PDB REMARK 900 THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING REMARK 900 DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 14 REMARK 900 STRUCTURES REMARK 900 RELATED ID: 1AZJ RELATED DB: PDB REMARK 900 THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING REMARK 900 DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 18 REMARK 900 STRUCTURES REMARK 900 RELATED ID: 1AZK RELATED DB: PDB REMARK 900 THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING REMARK 900 DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 19 REMARK 900 STRUCTURES
DBREF 1DY4 A 1 434 UNP P62694 GUX1_TRIRE 18 451
SEQRES 1 A 434 PCA SER ALA CYS THR LEU GLN SER GLU THR HIS PRO PRO SEQRES 2 A 434 LEU THR TRP GLN LYS CYS SER SER GLY GLY THR CYS THR SEQRES 3 A 434 GLN GLN THR GLY SER VAL VAL ILE ASP ALA ASN TRP ARG SEQRES 4 A 434 TRP THR HIS ALA THR ASN SER SER THR ASN CYS TYR ASP SEQRES 5 A 434 GLY ASN THR TRP SER SER THR LEU CYS PRO ASP ASN GLU SEQRES 6 A 434 THR CYS ALA LYS ASN CYS CYS LEU ASP GLY ALA ALA TYR SEQRES 7 A 434 ALA SER THR TYR GLY VAL THR THR SER GLY ASN SER LEU SEQRES 8 A 434 SER ILE GLY PHE VAL THR GLN SER ALA GLN LYS ASN VAL SEQRES 9 A 434 GLY ALA ARG LEU TYR LEU MET ALA SER ASP THR THR TYR SEQRES 10 A 434 GLN GLU PHE THR LEU LEU GLY ASN GLU PHE SER PHE ASP SEQRES 11 A 434 VAL ASP VAL SER GLN LEU PRO CYS GLY LEU ASN GLY ALA SEQRES 12 A 434 LEU TYR PHE VAL SER MET ASP ALA ASP GLY GLY VAL SER SEQRES 13 A 434 LYS TYR PRO THR ASN THR ALA GLY ALA LYS TYR GLY THR SEQRES 14 A 434 GLY TYR CYS ASP SER GLN CYS PRO ARG ASP LEU LYS PHE SEQRES 15 A 434 ILE ASN GLY GLN ALA ASN VAL GLU GLY TRP GLU PRO SER SEQRES 16 A 434 SER ASN ASN ALA ASN THR GLY ILE GLY GLY HIS GLY SER SEQRES 17 A 434 CYS CYS SER GLU MET ASP ILE TRP GLU ALA ASN SER ILE SEQRES 18 A 434 SER GLU ALA LEU THR PRO HIS PRO CYS THR THR VAL GLY SEQRES 19 A 434 GLN GLU ILE CYS GLU GLY ASP GLY CYS GLY GLY THR TYR SEQRES 20 A 434 SER ASP ASN ARG TYR GLY GLY THR CYS ASP PRO ASP GLY SEQRES 21 A 434 CYS ASP TRP ASN PRO TYR ARG LEU GLY ASN THR SER PHE SEQRES 22 A 434 TYR GLY PRO GLY SER SER PHE THR LEU ASP THR THR LYS SEQRES 23 A 434 LYS LEU THR VAL VAL THR GLN PHE GLU THR SER GLY ALA SEQRES 24 A 434 ILE ASN ARG TYR TYR VAL GLN ASN GLY VAL THR PHE GLN SEQRES 25 A 434 GLN PRO ASN ALA GLU LEU GLY SER TYR SER GLY ASN GLU SEQRES 26 A 434 LEU ASN ASP ASP TYR CYS THR ALA GLU GLU ALA GLU PHE SEQRES 27 A 434 GLY GLY SER SER PHE SER ASP LYS GLY GLY LEU THR GLN SEQRES 28 A 434 PHE LYS LYS ALA THR SER GLY GLY MET VAL LEU VAL MET SEQRES 29 A 434 SER LEU TRP ASP ASP TYR TYR ALA ASN MET LEU TRP LEU SEQRES 30 A 434 ASP SER THR TYR PRO THR ASN GLU THR SER SER THR PRO SEQRES 31 A 434 GLY ALA VAL ARG GLY SER CYS SER THR SER SER GLY VAL SEQRES 32 A 434 PRO ALA GLN VAL GLU SER GLN SER PRO ASN ALA LYS VAL SEQRES 33 A 434 THR PHE SER ASN ILE LYS PHE GLY PRO ILE GLY SER THR SEQRES 34 A 434 GLY ASN PRO SER GLY
MODRES 1DY4 ASN A 270 ASN GLYCOSYLATION SITE MODRES 1DY4 ASN A 384 ASN GLYCOSYLATION SITE MODRES 1DY4 PCA A 1 GLU PYROGLUTAMIC ACID
HET PCA A 1 8 HET NAG A 435 14 HET NAG A 436 14 HET SNP A 437 19 HET CO A 470 1 HET CO A 471 1
HETNAM PCA PYROGLUTAMIC ACID HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM SNP 1-(ISOPROPYLAMINO)-3-(1-NAPHTHYLOXY)-2-PROPANOL HETNAM CO COBALT (II) ION
HETSYN SNP S-PROPRANOLOL
FORMUL 1 PCA C5 H7 N O3 FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 4 SNP C16 H21 N O2 FORMUL 5 CO 2(CO 2+) FORMUL 7 HOH *342(H2 O)
HELIX 1 1 ALA A 36 ARG A 39 5 4 HELIX 2 2 ASP A 63 ASN A 70 1 8 HELIX 3 3 ALA A 163 GLY A 168 5 6 HELIX 4 4 ASP A 241 GLY A 244 5 4 HELIX 5 5 ASN A 327 PHE A 338 1 12 HELIX 6 6 SER A 341 LYS A 346 1 6 HELIX 7 7 GLY A 347 SER A 357 1 11 HELIX 8 8 MET A 374 SER A 379 1 6 HELIX 9 9 VAL A 403 SER A 411 1 9
SHEET 1 A 6 VAL A 84 SER A 87 0 SHEET 2 A 6 SER A 90 GLY A 94 -1 O SER A 90 N SER A 87 SHEET 3 A 6 LYS A 415 PRO A 425 -1 O VAL A 416 N ILE A 93 SHEET 4 A 6 PRO A 13 CYS A 19 0 SHEET 5 A 6 CYS A 25 ILE A 34 0 SHEET 6 A 6 ALA A 106 SER A 113 -1 O TYR A 109 N VAL A 33 SHEET 1 A1 7 VAL A 84 SER A 87 0 SHEET 2 A1 7 SER A 90 GLY A 94 -1 O SER A 90 N SER A 87 SHEET 3 A1 7 LYS A 415 PRO A 425 -1 O VAL A 416 N ILE A 93 SHEET 4 A1 7 ASN A 125 ASP A 132 -1 O GLU A 126 N GLY A 424 SHEET 5 A1 7 LEU A 288 PHE A 294 -1 O LEU A 288 N VAL A 131 SHEET 6 A1 7 ILE A 300 GLN A 306 -1 O ASN A 301 N GLN A 293 SHEET 7 A1 7 VAL A 309 GLN A 312 -1 O VAL A 309 N GLN A 306 SHEET 1 B 2 THR A 41 ALA A 43 0 SHEET 2 B 2 CYS A 71 LEU A 73 -1 O CYS A 72 N HIS A 42 SHEET 1 C 2 TYR A 51 ASP A 52 0 SHEET 2 C 2 THR A 55 TRP A 56 -1 O THR A 55 N ASP A 52 SHEET 1 D 2 VAL A 96 GLN A 98 0 SHEET 2 D 2 LYS A 102 VAL A 104 -1 O ASN A 103 N THR A 97 SHEET 1 E 2 PHE A 182 ILE A 183 0 SHEET 2 E 2 GLN A 186 ALA A 187 -1 O GLN A 186 N ILE A 183 SHEET 1 F 2 GLU A 193 PRO A 194 0 SHEET 2 F 2 GLY A 202 ILE A 203 -1 O ILE A 203 N GLU A 193 SHEET 1 G 2 HIS A 206 CYS A 209 0 SHEET 2 G 2 GLU A 236 GLU A 239 -1 O CYS A 238 N GLY A 207 SHEET 1 H 2 TYR A 274 GLY A 275 0 SHEET 2 H 2 LEU A 282 ASP A 283 1 O LEU A 282 N GLY A 275 SHEET 1 I 2 ALA A 316 LEU A 318 0 SHEET 2 I 2 TYR A 321 GLY A 323 -1 O TYR A 321 N LEU A 318
SSBOND 1 CYS A 4 CYS A 72 1555 1555 2.03 SSBOND 2 CYS A 19 CYS A 25 1555 1555 2.03 SSBOND 3 CYS A 50 CYS A 71 1555 1555 2.03 SSBOND 4 CYS A 61 CYS A 67 1555 1555 2.03 SSBOND 5 CYS A 138 CYS A 397 1555 1555 2.03 SSBOND 6 CYS A 172 CYS A 210 1555 1555 2.03 SSBOND 7 CYS A 176 CYS A 209 1555 1555 2.03 SSBOND 8 CYS A 230 CYS A 256 1555 1555 2.04 SSBOND 9 CYS A 238 CYS A 243 1555 1555 2.03 SSBOND 10 CYS A 261 CYS A 331 1555 1555 2.03
LINK C PCA A 1 N SER A 2 1555 1555 1.33 LINK ND2 ASN A 270 C1 NAG A 435 1555 1555 1.45 LINK ND2 ASN A 384 C1 NAG A 436 1555 1555 1.45 LINK CO CO A 470 OE1 GLU A 295 1555 1555 2.38 LINK CO CO A 470 OE2 GLU A 295 1555 4657 39.71 LINK CO CO A 470 OE1 GLU A 295 1555 4657 41.44 LINK CO CO A 470 OE2 GLU A 295 1555 1555 2.40 LINK CO CO A 470 OE2 GLU A 325 1555 4657 39.04 LINK CO CO A 470 OE2 GLU A 325 1555 1555 2.21 LINK CO CO A 471 OE2 GLU A 239 1555 1555 2.30 LINK CO CO A 471 NE2 HIS A 206 1555 1555 2.20
CISPEP 1 TYR A 381 PRO A 382 0 -0.27
SITE 1 AC1 7 SER A 21 GLY A 22 ASN A 270 PRO A 314 SITE 2 AC1 7 HOH A2054 HOH A2258 HOH A2341 SITE 1 AC2 2 ASN A 384 GLU A 385 SITE 1 AC3 14 TYR A 145 TYR A 171 ASP A 173 SER A 174 SITE 2 AC3 14 GLN A 175 GLU A 212 ASP A 214 GLU A 217 SITE 3 AC3 14 THR A 246 ARG A 251 PRO A 258 ASP A 369 SITE 4 AC3 14 TRP A 376 HOH A2185 SITE 1 AC4 2 GLU A 295 GLU A 325 SITE 1 AC5 2 HIS A 206 GLU A 239
CRYST1 82.960 83.110 110.680 90.00 90.00 90.00 I 2 2 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.012054 0.000000 0.000000 0.00000
SCALE2 0.000000 0.012032 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009035 0.00000