10 20 30 40 50 60 70 80 1D7W - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 20-OCT-99 1D7W
TITLE CRYSTAL STRUCTURE OF HUMAN MYELOPEROXIDASE ISOFORM C COMPLEXED WITH TITLE 2 CYANIDE AND BROMIDE AT PH 4.0
COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYELOPEROXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGHT CHAIN; COMPND 5 EC: 1.11.1.7; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: MYELOPEROXIDASE; COMPND 8 CHAIN: C, D; COMPND 9 FRAGMENT: HEAVY CHAIN; COMPND 10 EC: 1.11.1.7
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: BLOOD; SOURCE 6 CELL: NEUTROPHIL; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 TISSUE: BLOOD; SOURCE 12 CELL: NEUTROPHIL
KEYWDS HEME-PROTEIN, PEROXIDASE, OXIDOREDUCTASE, PEROXIDASE-CYANIDE-BROMIDE KEYWDS 2 COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR T.J.FIEDLER,R.E.FENNA
REVDAT 4 13-JUL-11 1D7W 1 VERSN REVDAT 3 24-FEB-09 1D7W 1 VERSN REVDAT 2 01-APR-03 1D7W 1 JRNL REVDAT 1 12-DEC-01 1D7W 0
JRNL AUTH M.BLAIR-JOHNSON,T.FIEDLER,R.FENNA JRNL TITL HUMAN MYELOPEROXIDASE: STRUCTURE OF A CYANIDE COMPLEX AND JRNL TITL 2 ITS INTERACTION WITH BROMIDE AND THIOCYANATE SUBSTRATES AT JRNL TITL 3 1.9 A RESOLUTION. JRNL REF BIOCHEMISTRY V. 40 13990 2001 JRNL REFN ISSN 0006-2960 JRNL PMID 11705390 JRNL DOI 10.1021/BI0111808
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.FENNA,J.ZENG,C.DAVEY REMARK 1 TITL STRUCTURE OF THE GREEN HEME IN MYELOPEROXIDASE REMARK 1 REF ARCH.BIOCHEM.BIOPHYS. V. 316 653 1995 REMARK 1 REFN ISSN 0003-9861 REMARK 1 DOI 10.1006/ABBI.1995.1086 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.A.DAVEY,R.E.FENNA REMARK 1 TITL 2.3 ANGSTROM RESOLUTION X-RAY CRYSTAL STRUCTURE OF THE REMARK 1 TITL 2 BISUBSTRATE ANALOGUE INHIBITOR SALICYLHYDROXAMIC ACID BOUND REMARK 1 TITL 3 TO HUMAN MYELOPEROXIDASE: A MODEL FOR A PREREACTION COMPLEX REMARK 1 TITL 4 WITH HYDROGEN PEROXIDE REMARK 1 REF BIOCHEMISTRY V. 35 10967 1996 REMARK 1 REFN ISSN 0006-2960 REMARK 1 DOI 10.1021/BI960577M REMARK 1 REFERENCE 3 REMARK 1 AUTH J.ZENG,R.E.FENNA REMARK 1 TITL X-RAY CRYSTAL STRUCTURE OF CANINE MYELOPEROXIDASE AT 3 REMARK 1 TITL 2 ANGSTROM RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 226 185 1992 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 4 REMARK 1 AUTH A.JACQUET,L.GARCIA-QUINTANA,V.DELEERSNYDER,R.FENNA,A.BOLLEN, REMARK 1 AUTH 2 N.MOGUILEVSKY REMARK 1 TITL SITE-DIRECTED MUTAGENESIS OF HUMAN MYELOPEROXIDASE: FURTHER REMARK 1 TITL 2 IDENTIFICATION OF RESIDUES INVOLVED IN CATALYTIC ACTIVITY REMARK 1 TITL 3 AND HEME INTERACTION REMARK 1 REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 202 73 1994 REMARK 1 REFN ISSN 0006-291X REMARK 1 DOI 10.1006/BBRC.1994.1895
REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 87.9 REMARK 3 NUMBER OF REFLECTIONS : 88542 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM 5% REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4477 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7308 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE : 0.3024 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 388 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9142 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 371 REMARK 3 SOLVENT ATOMS : 806 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.013 REMARK 3 BOND ANGLES (DEGREES) : 1.28 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.18 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.19 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1D7W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-99. REMARK 100 THE RCSB ID CODE IS RCSB009874.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-99 REMARK 200 TEMPERATURE (KELVIN) : 84.0 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : LONG FOCUSING MIRRORS, ADSC REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 92679 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 200 DATA REDUNDANCY : 3.710 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.89 REMARK 200 R MERGE FOR SHELL (I) : 0.19100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 7.890 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POLYETHYLENE GLYCOL 8000, AMMONIUM REMARK 280 SULFATE, SODIUM ACETATE, CALCIUM ACETATE, SODIUM CYANIDE, SODIUM REMARK 280 BROMIDE, PH 4.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.66200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 6 O HOH A 726A 1.75 REMARK 500 C CYN A 1844 NB HEM A 605 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS D 336 CE1 - NE2 - CD2 ANGL. DEV. = 4.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 2 140.75 -38.07 REMARK 500 PRO A 20 -4.00 -59.32 REMARK 500 PHE A 41 -9.84 -140.43 REMARK 500 SER A 42 -49.60 -156.99 REMARK 500 ASN C 114 105.50 55.46 REMARK 500 ARG C 136 -54.40 -127.45 REMARK 500 ASP C 142 -166.40 -65.10 REMARK 500 ILE C 158 -47.96 -131.94 REMARK 500 HIS C 217 -77.65 -75.48 REMARK 500 ASP C 218 76.41 -106.10 REMARK 500 ASP C 318 2.12 -69.31 REMARK 500 ARG C 333 6.30 -69.32 REMARK 500 ASN C 457 98.38 -167.28 REMARK 500 ASN C 555 10.09 -158.18 REMARK 500 LYS B 6 -32.32 -137.44 REMARK 500 PHE B 41 -11.85 -147.89 REMARK 500 SER B 42 -39.67 -158.39 REMARK 500 ARG D 136 -50.16 -126.55 REMARK 500 HIS D 217 -70.52 -68.81 REMARK 500 ASP D 218 32.40 -97.91 REMARK 500 ASP D 219 108.99 -19.76 REMARK 500 ASN D 225 99.73 -171.63 REMARK 500 ASP D 272 -177.82 -69.17 REMARK 500 ARG D 314 -74.01 -105.74 REMARK 500 ASN D 457 95.26 -165.35 REMARK 500 ASN D 555 10.75 -165.11 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 649A DISTANCE = 5.26 ANGSTROMS REMARK 525 HOH C 936A DISTANCE = 5.05 ANGSTROMS REMARK 525 HOH C 946A DISTANCE = 5.18 ANGSTROMS REMARK 525 HOH C 987A DISTANCE = 5.41 ANGSTROMS REMARK 525 HOH C1262A DISTANCE = 5.04 ANGSTROMS REMARK 525 HOH D 946B DISTANCE = 5.31 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 605 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 336 NE2 REMARK 620 2 HEM A 605 NA 93.2 REMARK 620 3 HEM A 605 NB 100.1 90.4 REMARK 620 4 HEM A 605 NC 90.5 176.1 89.7 REMARK 620 5 HEM A 605 ND 95.2 89.2 164.7 89.7 REMARK 620 6 CYN A1844 C 165.2 91.3 65.8 85.2 98.9 REMARK 620 7 CYN A1844 N 173.0 80.9 83.8 95.3 81.0 20.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 605 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 336 NE2 REMARK 620 2 HEM B 605 NA 92.9 REMARK 620 3 HEM B 605 NB 95.0 91.1 REMARK 620 4 HEM B 605 NC 89.7 177.3 89.2 REMARK 620 5 HEM B 605 ND 96.5 89.3 168.5 89.8 REMARK 620 6 CYN B2844 C 169.0 86.9 74.0 90.7 94.5 REMARK 620 7 CYN B2844 N 171.1 79.0 89.1 98.3 79.7 16.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C1600 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 96 O REMARK 620 2 ASP A 96 OD2 76.0 REMARK 620 3 THR C 168 O 72.1 146.0 REMARK 620 4 THR C 168 OG1 135.1 143.3 70.6 REMARK 620 5 PHE C 170 O 106.3 79.7 98.0 102.9 REMARK 620 6 ASP C 172 OD1 145.0 70.5 142.7 74.4 77.5 REMARK 620 7 SER C 174 OG 84.1 78.5 109.3 85.3 152.7 79.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D2600 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 96 O REMARK 620 2 ASP B 96 OD2 72.4 REMARK 620 3 THR D 168 O 77.6 149.5 REMARK 620 4 THR D 168 OG1 141.0 137.8 71.6 REMARK 620 5 PHE D 170 O 100.3 83.6 96.3 106.3 REMARK 620 6 ASP D 172 OD1 143.5 71.2 138.8 71.3 77.6 REMARK 620 7 SER D 174 OG 87.8 74.0 110.8 81.4 152.8 80.6 REMARK 620 N 1 2 3 4 5 6
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG C 1620 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG C 1630 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG C 1640 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG C 1641 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BMA C 1642 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN C 1643 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN C 1644 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FUC C 1645 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG D 2620 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG D 2630 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG D 2640 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG D 2641 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BMA D 2642 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN D 2643 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN D 2644 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FUC D 2645 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 1600 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 1601 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1602 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1603 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1610 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 1606 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 1604 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 1607 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 1608 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 1609 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR C 758A REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYN A 1844 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR C 889A REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR C 957A REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 2600 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B 2601 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2602 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 2610 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 2606 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 2604 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 2607 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 2608 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 2609 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 2611 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR D 758B REMARK 800 REMARK 800 SITE_IDENTIFIER: EC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYN B 2844 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR D 889B REMARK 800 REMARK 800 SITE_IDENTIFIER: EC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 605
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1MHL RELATED DB: PDB REMARK 900 1MHL CONTAINS THE NATIVE PROTEIN STRUCTURE SOLVED TO 2.25 REMARK 900 ANGSTROMS RESOLUTION REMARK 900 RELATED ID: 1MYP RELATED DB: PDB REMARK 900 1MYP CONTAINS THE CANINE MYELOPEROXIDASE STRUCTURE AT 3.0 REMARK 900 ANGSTROMS RESOLUTION REMARK 900 RELATED ID: 1CXP RELATED DB: PDB REMARK 900 1CXP CONTAINS THE CRYOGENIC NATIVE PROTEIN STRUCTURE TO REMARK 900 1.80 ANGSTROMS RESOLUTION REMARK 900 RELATED ID: 1D2V RELATED DB: PDB REMARK 900 1D2V CONTAINS THE BROMIDE-BOUND HUMAN MYELOPEROXIDASE AT REMARK 900 1.75 ANGSTROMS RESOLUTION REMARK 900 RELATED ID: 1D5L RELATED DB: PDB REMARK 900 1D5L CONTAINS THE CYANIDE-BOUND HUMAN MYELOPEROXIDASE AT REMARK 900 1.90 ANGSTROMS RESOLUTION
DBREF 1D7W A 1 104 UNP P05164 PERM_HUMAN 167 270 DBREF 1D7W B 1 104 UNP P05164 PERM_HUMAN 167 270 DBREF 1D7W C 113 578 UNP P05164 PERM_HUMAN 279 744 DBREF 1D7W D 113 578 UNP P05164 PERM_HUMAN 279 744
SEQADV 1D7W CSO C 150 UNP P05164 CYS 315 MODIFIED RESIDUE SEQADV 1D7W CSO D 150 UNP P05164 CYS 315 MODIFIED RESIDUE
SEQRES 1 A 104 CYS PRO GLU GLN ASP LYS TYR ARG THR ILE THR GLY MET SEQRES 2 A 104 CYS ASN ASN ARG ARG SER PRO THR LEU GLY ALA SER ASN SEQRES 3 A 104 ARG ALA PHE VAL ARG TRP LEU PRO ALA GLU TYR GLU ASP SEQRES 4 A 104 GLY PHE SER LEU PRO TYR GLY TRP THR PRO GLY VAL LYS SEQRES 5 A 104 ARG ASN GLY PHE PRO VAL ALA LEU ALA ARG ALA VAL SER SEQRES 6 A 104 ASN GLU ILE VAL ARG PHE PRO THR ASP GLN LEU THR PRO SEQRES 7 A 104 ASP GLN GLU ARG SER LEU MET PHE MET GLN TRP GLY GLN SEQRES 8 A 104 LEU LEU ASP HIS ASP LEU ASP PHE THR PRO GLU PRO ALA SEQRES 1 C 466 VAL ASN CYS GLU THR SER CYS VAL GLN GLN PRO PRO CYS SEQRES 2 C 466 PHE PRO LEU LYS ILE PRO PRO ASN ASP PRO ARG ILE LYS SEQRES 3 C 466 ASN GLN ALA ASP CYS ILE PRO PHE PHE ARG SER CSO PRO SEQRES 4 C 466 ALA CYS PRO GLY SER ASN ILE THR ILE ARG ASN GLN ILE SEQRES 5 C 466 ASN ALA LEU THR SER PHE VAL ASP ALA SER MET VAL TYR SEQRES 6 C 466 GLY SER GLU GLU PRO LEU ALA ARG ASN LEU ARG ASN MET SEQRES 7 C 466 SER ASN GLN LEU GLY LEU LEU ALA VAL ASN GLN ARG PHE SEQRES 8 C 466 GLN ASP ASN GLY ARG ALA LEU LEU PRO PHE ASP ASN LEU SEQRES 9 C 466 HIS ASP ASP PRO CYS LEU LEU THR ASN ARG SER ALA ARG SEQRES 10 C 466 ILE PRO CYS PHE LEU ALA GLY ASP THR ARG SER SER GLU SEQRES 11 C 466 MET PRO GLU LEU THR SER MET HIS THR LEU LEU LEU ARG SEQRES 12 C 466 GLU HIS ASN ARG LEU ALA THR GLU LEU LYS SER LEU ASN SEQRES 13 C 466 PRO ARG TRP ASP GLY GLU ARG LEU TYR GLN GLU ALA ARG SEQRES 14 C 466 LYS ILE VAL GLY ALA MET VAL GLN ILE ILE THR TYR ARG SEQRES 15 C 466 ASP TYR LEU PRO LEU VAL LEU GLY PRO THR ALA MET ARG SEQRES 16 C 466 LYS TYR LEU PRO THR TYR ARG SER TYR ASN ASP SER VAL SEQRES 17 C 466 ASP PRO ARG ILE ALA ASN VAL PHE THR ASN ALA PHE ARG SEQRES 18 C 466 TYR GLY HIS THR LEU ILE GLN PRO PHE MET PHE ARG LEU SEQRES 19 C 466 ASP ASN ARG TYR GLN PRO MET GLU PRO ASN PRO ARG VAL SEQRES 20 C 466 PRO LEU SER ARG VAL PHE PHE ALA SER TRP ARG VAL VAL SEQRES 21 C 466 LEU GLU GLY GLY ILE ASP PRO ILE LEU ARG GLY LEU MET SEQRES 22 C 466 ALA THR PRO ALA LYS LEU ASN ARG GLN ASN GLN ILE ALA SEQRES 23 C 466 VAL ASP GLU ILE ARG GLU ARG LEU PHE GLU GLN VAL MET SEQRES 24 C 466 ARG ILE GLY LEU ASP LEU PRO ALA LEU ASN MET GLN ARG SEQRES 25 C 466 SER ARG ASP HIS GLY LEU PRO GLY TYR ASN ALA TRP ARG SEQRES 26 C 466 ARG PHE CYS GLY LEU PRO GLN PRO GLU THR VAL GLY GLN SEQRES 27 C 466 LEU GLY THR VAL LEU ARG ASN LEU LYS LEU ALA ARG LYS SEQRES 28 C 466 LEU MET GLU GLN TYR GLY THR PRO ASN ASN ILE ASP ILE SEQRES 29 C 466 TRP MET GLY GLY VAL SER GLU PRO LEU LYS ARG LYS GLY SEQRES 30 C 466 ARG VAL GLY PRO LEU LEU ALA CYS ILE ILE GLY THR GLN SEQRES 31 C 466 PHE ARG LYS LEU ARG ASP GLY ASP ARG PHE TRP TRP GLU SEQRES 32 C 466 ASN GLU GLY VAL PHE SER MET GLN GLN ARG GLN ALA LEU SEQRES 33 C 466 ALA GLN ILE SER LEU PRO ARG ILE ILE CYS ASP ASN THR SEQRES 34 C 466 GLY ILE THR THR VAL SER LYS ASN ASN ILE PHE MET SER SEQRES 35 C 466 ASN SER TYR PRO ARG ASP PHE VAL ASN CYS SER THR LEU SEQRES 36 C 466 PRO ALA LEU ASN LEU ALA SER TRP ARG GLU ALA SEQRES 1 B 104 CYS PRO GLU GLN ASP LYS TYR ARG THR ILE THR GLY MET SEQRES 2 B 104 CYS ASN ASN ARG ARG SER PRO THR LEU GLY ALA SER ASN SEQRES 3 B 104 ARG ALA PHE VAL ARG TRP LEU PRO ALA GLU TYR GLU ASP SEQRES 4 B 104 GLY PHE SER LEU PRO TYR GLY TRP THR PRO GLY VAL LYS SEQRES 5 B 104 ARG ASN GLY PHE PRO VAL ALA LEU ALA ARG ALA VAL SER SEQRES 6 B 104 ASN GLU ILE VAL ARG PHE PRO THR ASP GLN LEU THR PRO SEQRES 7 B 104 ASP GLN GLU ARG SER LEU MET PHE MET GLN TRP GLY GLN SEQRES 8 B 104 LEU LEU ASP HIS ASP LEU ASP PHE THR PRO GLU PRO ALA SEQRES 1 D 466 VAL ASN CYS GLU THR SER CYS VAL GLN GLN PRO PRO CYS SEQRES 2 D 466 PHE PRO LEU LYS ILE PRO PRO ASN ASP PRO ARG ILE LYS SEQRES 3 D 466 ASN GLN ALA ASP CYS ILE PRO PHE PHE ARG SER CSO PRO SEQRES 4 D 466 ALA CYS PRO GLY SER ASN ILE THR ILE ARG ASN GLN ILE SEQRES 5 D 466 ASN ALA LEU THR SER PHE VAL ASP ALA SER MET VAL TYR SEQRES 6 D 466 GLY SER GLU GLU PRO LEU ALA ARG ASN LEU ARG ASN MET SEQRES 7 D 466 SER ASN GLN LEU GLY LEU LEU ALA VAL ASN GLN ARG PHE SEQRES 8 D 466 GLN ASP ASN GLY ARG ALA LEU LEU PRO PHE ASP ASN LEU SEQRES 9 D 466 HIS ASP ASP PRO CYS LEU LEU THR ASN ARG SER ALA ARG SEQRES 10 D 466 ILE PRO CYS PHE LEU ALA GLY ASP THR ARG SER SER GLU SEQRES 11 D 466 MET PRO GLU LEU THR SER MET HIS THR LEU LEU LEU ARG SEQRES 12 D 466 GLU HIS ASN ARG LEU ALA THR GLU LEU LYS SER LEU ASN SEQRES 13 D 466 PRO ARG TRP ASP GLY GLU ARG LEU TYR GLN GLU ALA ARG SEQRES 14 D 466 LYS ILE VAL GLY ALA MET VAL GLN ILE ILE THR TYR ARG SEQRES 15 D 466 ASP TYR LEU PRO LEU VAL LEU GLY PRO THR ALA MET ARG SEQRES 16 D 466 LYS TYR LEU PRO THR TYR ARG SER TYR ASN ASP SER VAL SEQRES 17 D 466 ASP PRO ARG ILE ALA ASN VAL PHE THR ASN ALA PHE ARG SEQRES 18 D 466 TYR GLY HIS THR LEU ILE GLN PRO PHE MET PHE ARG LEU SEQRES 19 D 466 ASP ASN ARG TYR GLN PRO MET GLU PRO ASN PRO ARG VAL SEQRES 20 D 466 PRO LEU SER ARG VAL PHE PHE ALA SER TRP ARG VAL VAL SEQRES 21 D 466 LEU GLU GLY GLY ILE ASP PRO ILE LEU ARG GLY LEU MET SEQRES 22 D 466 ALA THR PRO ALA LYS LEU ASN ARG GLN ASN GLN ILE ALA SEQRES 23 D 466 VAL ASP GLU ILE ARG GLU ARG LEU PHE GLU GLN VAL MET SEQRES 24 D 466 ARG ILE GLY LEU ASP LEU PRO ALA LEU ASN MET GLN ARG SEQRES 25 D 466 SER ARG ASP HIS GLY LEU PRO GLY TYR ASN ALA TRP ARG SEQRES 26 D 466 ARG PHE CYS GLY LEU PRO GLN PRO GLU THR VAL GLY GLN SEQRES 27 D 466 LEU GLY THR VAL LEU ARG ASN LEU LYS LEU ALA ARG LYS SEQRES 28 D 466 LEU MET GLU GLN TYR GLY THR PRO ASN ASN ILE ASP ILE SEQRES 29 D 466 TRP MET GLY GLY VAL SER GLU PRO LEU LYS ARG LYS GLY SEQRES 30 D 466 ARG VAL GLY PRO LEU LEU ALA CYS ILE ILE GLY THR GLN SEQRES 31 D 466 PHE ARG LYS LEU ARG ASP GLY ASP ARG PHE TRP TRP GLU SEQRES 32 D 466 ASN GLU GLY VAL PHE SER MET GLN GLN ARG GLN ALA LEU SEQRES 33 D 466 ALA GLN ILE SER LEU PRO ARG ILE ILE CYS ASP ASN THR SEQRES 34 D 466 GLY ILE THR THR VAL SER LYS ASN ASN ILE PHE MET SER SEQRES 35 D 466 ASN SER TYR PRO ARG ASP PHE VAL ASN CYS SER THR LEU SEQRES 36 D 466 PRO ALA LEU ASN LEU ALA SER TRP ARG GLU ALA
MODRES 1D7W ASN C 317 ASN GLYCOSYLATION SITE MODRES 1D7W ASN C 189 ASN GLYCOSYLATION SITE MODRES 1D7W ASN C 225 ASN GLYCOSYLATION SITE MODRES 1D7W ASN D 317 ASN GLYCOSYLATION SITE MODRES 1D7W ASN D 189 ASN GLYCOSYLATION SITE MODRES 1D7W ASN D 225 ASN GLYCOSYLATION SITE MODRES 1D7W CSO C 150 CYS S-HYDROXYCYSTEINE MODRES 1D7W CSO D 150 CYS S-HYDROXYCYSTEINE
HET CSO C 150 7 HET CSO D 150 7 HET NAG C1620 14 HET NAG C1630 14 HET NAG C1640 14 HET NAG C1641 14 HET BMA C1642 11 HET MAN C1643 11 HET MAN C1644 11 HET FUC C1645 10 HET NAG D2620 14 HET NAG D2630 14 HET NAG D2640 14 HET NAG D2641 14 HET BMA D2642 11 HET MAN D2643 11 HET MAN D2644 11 HET FUC D2645 10 HET CA C1600 1 HET BR A1601 1 HET SO4 A1602 5 HET SO4 C1603 5 HET SO4 C1610 5 HET ACT C1606 4 HET ACT C1604 4 HET ACT C1607 4 HET ACT B1608 4 HET ACT C1609 4 HET ACT C1612 4 HET BR C 758A 1 HET CYN A1844 2 HET BR C 889A 1 HET BR C 957A 1 HET CA D2600 1 HET BR B2601 1 HET SO4 B2602 5 HET SO4 D2610 5 HET ACT D2606 4 HET ACT D2604 4 HET ACT D2607 4 HET ACT A2608 4 HET ACT D2609 4 HET ACT B2611 4 HET BR D 758B 1 HET CYN B2844 2 HET BR D 889B 1 HET BR D 957B 1 HET HEM A 605 43 HET HEM B 605 43
HETNAM CSO S-HYDROXYCYSTEINE HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM BMA BETA-D-MANNOSE HETNAM MAN ALPHA-D-MANNOSE HETNAM FUC ALPHA-L-FUCOSE HETNAM CA CALCIUM ION HETNAM BR BROMIDE ION HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETNAM CYN CYANIDE ION HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE
HETSYN HEM HEME
FORMUL 2 CSO 2(C3 H7 N O3 S) FORMUL 5 NAG 8(C8 H15 N O6) FORMUL 7 BMA 2(C6 H12 O6) FORMUL 7 MAN 4(C6 H12 O6) FORMUL 7 FUC 2(C6 H12 O5) FORMUL 11 CA 2(CA 2+) FORMUL 12 BR 8(BR 1-) FORMUL 13 SO4 5(O4 S 2-) FORMUL 16 ACT 12(C2 H3 O2 1-) FORMUL 23 CYN 2(C N 1-) FORMUL 40 HEM 2(C34 H32 FE N4 O4) FORMUL 42 HOH *806(H2 O)
HELIX 1 1 LEU A 60 VAL A 69 1 10 HELIX 2 2 PRO A 72 LEU A 76 5 5 HELIX 3 3 LEU A 84 ASP A 98 1 15 HELIX 4 4 ALA C 173 GLY C 178 1 6 HELIX 5 5 GLU C 180 ARG C 188 1 9 HELIX 6 6 ASP C 219 ASN C 225 1 7 HELIX 7 7 MET C 243 ASN C 268 1 26 HELIX 8 8 ASP C 272 ASP C 295 1 24 HELIX 9 9 TYR C 296 GLY C 302 1 7 HELIX 10 10 GLY C 302 LEU C 310 1 9 HELIX 11 11 ALA C 325 PHE C 332 1 8 HELIX 12 12 ARG C 333 ILE C 339 5 7 HELIX 13 13 SER C 362 VAL C 364 5 3 HELIX 14 14 SER C 368 GLU C 374 1 7 HELIX 15 15 ILE C 377 THR C 387 1 11 HELIX 16 16 VAL C 399 GLU C 404 1 6 HELIX 17 17 PHE C 407 MET C 411 5 5 HELIX 18 18 ASP C 416 HIS C 428 1 13 HELIX 19 19 GLY C 432 CYS C 440 1 9 HELIX 20 20 THR C 447 ARG C 456 1 10 HELIX 21 21 ASN C 457 GLY C 469 1 13 HELIX 22 22 THR C 470 ILE C 474 5 5 HELIX 23 23 ASP C 475 GLU C 483 1 9 HELIX 24 24 GLY C 492 GLY C 509 1 18 HELIX 25 25 SER C 521 ALA C 529 1 9 HELIX 26 26 SER C 532 THR C 541 1 10 HELIX 27 27 SER C 565 LEU C 567 5 3 HELIX 28 28 LEU C 572 ARG C 576 5 5 HELIX 29 29 LEU B 60 VAL B 69 1 10 HELIX 30 30 PRO B 72 LEU B 76 5 5 HELIX 31 31 LEU B 84 ASP B 98 1 15 HELIX 32 32 ALA D 173 GLY D 178 1 6 HELIX 33 33 GLU D 180 LEU D 187 1 8 HELIX 34 34 ASP D 219 THR D 224 1 6 HELIX 35 35 MET D 243 ASN D 268 1 26 HELIX 36 36 ASP D 272 ASP D 295 1 24 HELIX 37 37 ASP D 295 GLY D 302 1 8 HELIX 38 38 LEU D 301 LEU D 310 1 10 HELIX 39 39 VAL D 327 PHE D 332 1 6 HELIX 40 40 ARG D 333 ILE D 339 5 7 HELIX 41 41 SER D 362 VAL D 364 5 3 HELIX 42 42 SER D 368 GLU D 374 1 7 HELIX 43 43 ILE D 377 ALA D 386 1 10 HELIX 44 44 VAL D 399 GLU D 404 1 6 HELIX 45 45 PHE D 407 MET D 411 5 5 HELIX 46 46 ASP D 416 HIS D 428 1 13 HELIX 47 47 GLY D 432 CYS D 440 1 9 HELIX 48 48 THR D 447 ARG D 456 1 10 HELIX 49 49 ASN D 457 GLY D 469 1 13 HELIX 50 50 THR D 470 ILE D 474 5 5 HELIX 51 51 ASP D 475 GLU D 483 1 9 HELIX 52 52 GLY D 492 GLY D 509 1 18 HELIX 53 53 SER D 521 ALA D 529 1 9 HELIX 54 54 SER D 532 THR D 541 1 10 HELIX 55 55 SER D 565 LEU D 567 5 3 HELIX 56 56 LEU D 572 ARG D 576 5 5
SHEET 1 A 2 ARG A 27 ALA A 28 0 SHEET 2 A 2 ILE C 164 ASN C 165 -1 N ASN C 165 O ARG A 27 SHEET 1 B 2 PRO A 78 SER A 83 0 SHEET 2 B 2 PRO C 388 LYS C 390 -1 O ALA C 389 N ASP A 79 SHEET 1 C 2 LEU C 128 LYS C 129 0 SHEET 2 C 2 CYS C 143 ILE C 144 -1 O ILE C 144 N LEU C 128 SHEET 1 D 2 PHE C 342 PHE C 344 0 SHEET 2 D 2 ARG C 358 PRO C 360 -1 O VAL C 359 N MET C 343 SHEET 1 E 2 THR C 545 SER C 547 0 SHEET 2 E 2 PHE C 561 ASN C 563 -1 N VAL C 562 O VAL C 546 SHEET 1 F 2 ARG B 27 ALA B 28 0 SHEET 2 F 2 ILE D 164 ASN D 165 -1 N ASN D 165 O ARG B 27 SHEET 1 G 2 PRO B 78 SER B 83 0 SHEET 2 G 2 PRO D 388 LYS D 390 -1 O ALA D 389 N ASP B 79 SHEET 1 H 2 LEU D 128 LYS D 129 0 SHEET 2 H 2 CYS D 143 ILE D 144 -1 O ILE D 144 N LEU D 128 SHEET 1 I 2 PHE D 342 PHE D 344 0 SHEET 2 I 2 ARG D 358 PRO D 360 -1 O VAL D 359 N MET D 343 SHEET 1 J 2 THR D 545 SER D 547 0 SHEET 2 J 2 PHE D 561 ASN D 563 -1 N VAL D 562 O VAL D 546
SSBOND 1 CYS A 1 CYS A 14 1555 1555 1.98 SSBOND 2 CYS C 115 CYS C 125 1555 1555 2.08 SSBOND 3 CYS C 119 CYS C 143 1555 1555 2.05 SSBOND 4 CYS C 153 CYS D 153 1555 1555 2.05 SSBOND 5 CYS C 221 CYS C 232 1555 1555 2.00 SSBOND 6 CYS C 440 CYS C 497 1555 1555 2.01 SSBOND 7 CYS C 538 CYS C 564 1555 1555 2.03 SSBOND 8 CYS B 1 CYS B 14 1555 1555 1.99 SSBOND 9 CYS D 115 CYS D 125 1555 1555 2.04 SSBOND 10 CYS D 119 CYS D 143 1555 1555 2.07 SSBOND 11 CYS D 221 CYS D 232 1555 1555 2.03 SSBOND 12 CYS D 440 CYS D 497 1555 1555 2.02 SSBOND 13 CYS D 538 CYS D 564 1555 1555 2.03
LINK O4 NAG C1640 C1 NAG C1641 1555 1555 1.38 LINK O4 NAG C1641 C1 BMA C1642 1555 1555 1.39 LINK O3 BMA C1642 C1 MAN C1643 1555 1555 1.38 LINK O6 BMA C1642 C1 MAN C1644 1555 1555 1.40 LINK O6 NAG C1640 C1 FUC C1645 1555 1555 1.39 LINK O4 NAG D2640 C1 NAG D2641 1555 1555 1.38 LINK O4 NAG D2641 C1 BMA D2642 1555 1555 1.38 LINK O3 BMA D2642 C1 MAN D2643 1555 1555 1.39 LINK O6 BMA D2642 C1 MAN D2644 1555 1555 1.40 LINK O6 NAG D2640 C1 FUC D2645 1555 1555 1.41 LINK ND2 ASN C 317 C1 NAG C1640 1555 1555 1.46 LINK ND2 ASN C 189 C1 NAG C1620 1555 1555 1.43 LINK ND2 ASN C 225 C1 NAG C1630 1555 1555 1.46 LINK ND2 ASN D 317 C1 NAG D2640 1555 1555 1.45 LINK ND2 ASN D 189 C1 NAG D2620 1555 1555 1.45 LINK ND2 ASN D 225 C1 NAG D2630 1555 1555 1.46 LINK CMB HEM A 605 OE2 GLU C 242 1555 1555 1.55 LINK CMB HEM B 605 OE2 GLU D 242 1555 1555 1.56 LINK CBB HEM A 605 SD MET C 243 1555 1555 1.62 LINK CBB HEM B 605 SD MET D 243 1555 1555 1.61 LINK FE HEM A 605 NE2 HIS C 336 1555 1555 2.18 LINK FE HEM B 605 NE2 HIS D 336 1555 1555 2.24 LINK CMD HEM A 605 OD1 ASP A 94 1555 1555 1.55 LINK OD1 ASP B 94 CMD HEM B 605 1555 1555 1.56 LINK FE HEM A 605 C CYN A1844 1555 1555 2.06 LINK FE HEM B 605 C CYN B2844 1555 1555 2.01 LINK O ASP A 96 CA CA C1600 1555 1555 2.40 LINK OD2 ASP A 96 CA CA C1600 1555 1555 2.48 LINK O THR C 168 CA CA C1600 1555 1555 2.34 LINK OG1 THR C 168 CA CA C1600 1555 1555 2.39 LINK O PHE C 170 CA CA C1600 1555 1555 2.27 LINK OD1 ASP C 172 CA CA C1600 1555 1555 2.41 LINK OG SER C 174 CA CA C1600 1555 1555 2.53 LINK O ASP B 96 CA CA D2600 1555 1555 2.23 LINK OD2 ASP B 96 CA CA D2600 1555 1555 2.57 LINK O THR D 168 CA CA D2600 1555 1555 2.24 LINK OG1 THR D 168 CA CA D2600 1555 1555 2.28 LINK O PHE D 170 CA CA D2600 1555 1555 2.37 LINK OD1 ASP D 172 CA CA D2600 1555 1555 2.54 LINK OG SER D 174 CA CA D2600 1555 1555 2.25 LINK FE HEM A 605 N CYN A1844 1555 1555 2.81 LINK FE HEM B 605 N CYN B2844 1555 1555 2.90 LINK C SER C 149 N CSO C 150 1555 1555 1.33 LINK C CSO C 150 N PRO C 151 1555 1555 1.34 LINK C SER D 149 N CSO D 150 1555 1555 1.34 LINK C CSO D 150 N PRO D 151 1555 1555 1.35
CISPEP 1 PRO C 123 PRO C 124 0 0.21 CISPEP 2 GLU C 354 PRO C 355 0 0.58 CISPEP 3 ASN C 549 ASN C 550 0 1.08 CISPEP 4 TYR C 557 PRO C 558 0 1.74 CISPEP 5 PRO D 123 PRO D 124 0 0.29 CISPEP 6 GLU D 354 PRO D 355 0 0.65 CISPEP 7 ASN D 549 ASN D 550 0 -0.68 CISPEP 8 TYR D 557 PRO D 558 0 0.59
SITE 1 AC1 8 ASN C 189 ASN C 192 LEU C 196 ALA C 198 SITE 2 AC1 8 VAL C 199 GLN C 201 HOH C 650A HOH C1210A SITE 1 AC2 3 ASN C 225 ALA C 228 TRP C 369 SITE 1 AC3 7 ASN C 317 VAL C 320 HOH C 651A HOH C 861A SITE 2 AC3 7 NAG C1641 FUC C1645 HOH D 775A SITE 1 AC4 11 LEU B 33 SER C 319 HOH C 804A HOH C 897A SITE 2 AC4 11 NAG C1640 BMA C1642 FUC C1645 PHE D 439 SITE 3 AC4 11 GLY D 441 HOH D 706B HOH D 775A SITE 1 AC5 6 HOH C 770B HOH C 888A NAG C1641 MAN C1643 SITE 2 AC5 6 MAN C1644 PHE D 439 SITE 1 AC6 2 BMA C1642 LYS D 308 SITE 1 AC7 7 HOH C 803B HOH C 888A HOH C 923B BMA C1642 SITE 2 AC7 7 PHE D 439 LYS D 505 FUC D2645 SITE 1 AC8 7 ARG C 504 HOH C 830A NAG C1640 NAG C1641 SITE 2 AC8 7 HOH D 803A HOH D 923A MAN D2644 SITE 1 AC9 5 ASN D 189 ASN D 192 ALA D 198 VAL D 199 SITE 2 AC9 5 GLN D 201 SITE 1 BC1 4 ASN D 225 ALA D 228 TRP D 369 LEU D 373 SITE 1 BC2 7 HOH C 775B ASN D 317 VAL D 320 HOH D 651B SITE 2 BC2 7 HOH D 861B NAG D2641 FUC D2645 SITE 1 BC3 12 LEU A 33 ARG C 438 PHE C 439 GLY C 441 SITE 2 BC3 12 HOH C 775B SER D 319 HOH D 706A HOH D 804B SITE 3 BC3 12 HOH D 888B HOH D 897B NAG D2640 BMA D2642 SITE 1 BC4 6 PHE C 439 HOH C 770A HOH C 771A NAG D2641 SITE 2 BC4 6 MAN D2643 MAN D2644 SITE 1 BC5 2 LYS C 308 BMA D2642 SITE 1 BC6 7 TRP A 32 PHE C 439 LYS C 505 FUC C1645 SITE 2 BC6 7 HOH D 803A HOH D 923A BMA D2642 SITE 1 BC7 5 HOH C 803B MAN C1644 ARG D 504 HOH D 830B SITE 2 BC7 5 NAG D2640 SITE 1 BC8 5 ASP A 96 THR C 168 PHE C 170 ASP C 172 SITE 2 BC8 5 SER C 174 SITE 1 BC9 4 TRP A 32 ASN C 326 VAL C 327 TRP C 436 SITE 1 CC1 5 THR A 73 HOH A 961A ASP C 400 ARG C 405 SITE 2 CC1 5 HOH C 842A SITE 1 CC2 5 ARG C 229 THR C 447 GLY C 449 GLN C 450 SITE 2 CC2 5 HOH C 960A SITE 1 CC3 6 GLU A 81 LYS C 488 ARG C 490 HOH C 881A SITE 2 CC3 6 SER D 227 ARG D 229 SITE 1 CC4 5 PRO C 123 PRO C 124 ARG C 161 HOH C 661A SITE 2 CC4 5 HOH C 915A SITE 1 CC5 1 ARG C 525 SITE 1 CC6 3 PRO C 303 ARG C 307 ARG C 487 SITE 1 CC7 9 PRO A 34 HOH A 668A ASN B 16 SER B 19 SITE 2 CC7 9 LEU B 22 HOH B 723B HOH B 819B ASP D 318 SITE 3 CC7 9 HOH D 860B SITE 1 CC8 7 ILE C 531 SER C 532 ARG C 535 ILE C 536 SITE 2 CC8 7 ASP C 539 LEU C 570 HOH C 874A SITE 1 CC9 4 ASN C 348 ARG C 382 ILE C 543 THR C 544 SITE 1 DC1 4 GLN A 91 HIS A 95 HEM A 605 HOH C 845A SITE 1 DC2 3 ASN C 200 GLN C 201 PHE C 213 SITE 1 DC3 1 HOH A 843A SITE 1 DC4 5 ASP B 96 THR D 168 PHE D 170 ASP D 172 SITE 2 DC4 5 SER D 174 SITE 1 DC5 3 TRP B 32 VAL D 327 TRP D 436 SITE 1 DC6 3 THR B 73 HOH B 724B ARG D 405 SITE 1 DC7 5 GLU B 81 LYS D 488 ARG D 490 HOH D 813B SITE 2 DC7 5 HOH D 881B SITE 1 DC8 5 PRO D 124 ARG D 161 HOH D 661B HOH D 871B SITE 2 DC8 5 HOH D 989B SITE 1 DC9 2 MET D 522 ARG D 525 SITE 1 EC1 4 PRO D 303 ARG D 307 ARG D 487 LYS D 488 SITE 1 EC2 9 ASN A 16 SER A 19 LEU A 22 HOH A 723A SITE 2 EC2 9 HOH A 860A PRO B 34 HOH B 668B ASP C 318 SITE 3 EC2 9 HOH C 819A SITE 1 EC3 6 GLN D 530 ILE D 531 SER D 532 ARG D 535 SITE 2 EC3 6 ASP D 539 LEU D 570 SITE 1 EC4 4 PRO B 2 ARG B 17 HOH B 731A HOH B 952B SITE 1 EC5 4 ASN D 348 ILE D 543 THR D 544 THR D 545 SITE 1 EC6 5 GLN B 91 HIS B 95 HEM B 605 HOH B 843B SITE 2 EC6 5 HOH B 845B SITE 1 EC7 2 GLN D 201 PHE D 213 SITE 1 EC8 23 MET A 87 GLY A 90 GLN A 91 ASP A 94 SITE 2 EC8 23 ASP A 98 PHE A 99 THR A 100 HOH A 798A SITE 3 EC8 23 HOH A 846A HOH A 856A CYN A1844 ARG C 239 SITE 4 EC8 23 GLU C 242 MET C 243 THR C 329 PHE C 332 SITE 5 EC8 23 ARG C 333 GLY C 335 HIS C 336 PHE C 365 SITE 6 EC8 23 PHE C 407 LEU C 417 ARG C 424 SITE 1 EC9 22 MET B 87 GLY B 90 GLN B 91 ASP B 94 SITE 2 EC9 22 ASP B 98 PHE B 99 THR B 100 HOH B 845B SITE 3 EC9 22 HOH B 846B CYN B2844 ARG D 239 GLU D 242 SITE 4 EC9 22 MET D 243 THR D 329 PHE D 332 ARG D 333 SITE 5 EC9 22 GLY D 335 HIS D 336 PHE D 407 LEU D 417 SITE 6 EC9 22 LEU D 420 ARG D 424
CRYST1 111.338 63.324 92.263 90.00 97.41 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.008982 0.000000 0.001168 0.00000
SCALE2 0.000000 0.015792 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010930 0.00000
MTRIX1 1 -0.606400 0.681360 -0.409900 48.13749 1
MTRIX2 1 0.686270 0.188080 -0.702610 -7.20248 1
MTRIX3 1 -0.401640 -0.707370 -0.581650 34.41179 1