10 20 30 40 50 60 70 80 1D6K - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RIBOSOME 14-OCT-99 1D6K
TITLE NMR SOLUTION STRUCTURE OF THE 5S RRNA E-LOOP/L25 COMPLEX
COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOMAL PROTEIN L25; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 5S RRNA E-LOOP (5SE); COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET11A; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 OTHER_DETAILS: THE RNA SEQUENCE WAS SYNTHESIZED VIA IN SOURCE 11 VITRO TRANSCIPTION (T7 POLYMERASE) OF A PLASMID DNA SOURCE 12 TEMPLATE.
KEYWDS PROTEIN-RNA COMPLEX, RIBOSOME
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.STOLDT,J.WOHNERT,O.OHLENSCHLAGER,M.GORLACH,L.R.BROWN
REVDAT 3 24-FEB-09 1D6K 1 VERSN REVDAT 2 29-NOV-99 1D6K 1 EXPDTA REVDAT 1 22-NOV-99 1D6K 0
JRNL AUTH M.STOLDT,J.WOHNERT,O.OHLENSCHLAGER,M.GORLACH, JRNL AUTH 2 L.R.BROWN JRNL TITL THE NMR STRUCTURE OF THE 5S RRNA E-DOMAIN-PROTEIN JRNL TITL 2 L25 COMPLEX SHOWS PREFORMED AND INDUCED JRNL TITL 3 RECOGNITION. JRNL REF EMBO J. V. 18 6508 1999 JRNL REFN ISSN 0261-4189 JRNL PMID 10562563 JRNL DOI 10.1093/EMBOJ/18.22.6508
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : OPAL/AMBER94 2.6 REMARK 3 AUTHORS : LUGINBUEHL/CORNELL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1D6K COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-OCT-99. REMARK 100 THE RCSB ID CODE IS RCSB009836.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 298; 298; 298; 298; 298 REMARK 210 PH : 7.2; 7.2; 7.2; 7.2; 7.2; 7.2 REMARK 210 IONIC STRENGTH : 100MM KCL; 100MM KCL; 100MM REMARK 210 KCL; 100MM KCL; 100MM KCL; REMARK 210 100MM KCL REMARK 210 PRESSURE : AMBIENT; AMBIENT; AMBIENT; REMARK 210 AMBIENT; AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 2MM L25 U-15N,13C/5SE NA; REMARK 210 20MM PHOSPHATE BUFFER; 100MM REMARK 210 KCL; 2.2MM L25 U-15N,13C/5SE REMARK 210 NA; 20MM PHOSPHATE BUFFER; REMARK 210 100MM KCL; 1.8MM L25 NA/5SE U- REMARK 210 15N; 20MM PHOSPHATE BUFFER; REMARK 210 100MM KCL; 1MM L25 U-15N/5SE U REMARK 210 -15N; 20MM PHOSPHATE BUFFER; REMARK 210 100MM KCL; 1.8MM L25 NA/5SE U- REMARK 210 15N,13C; 20MM PHOSPHATE REMARK 210 BUFFER; 100MM KCL; 1.7MM L25 REMARK 210 NA/5SE U-15N,13C; 20MM REMARK 210 PHOSPHATE BUFFER; 100MM KCL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY, 3D_F1-13C-FILTERED,F3-EDITED_NOESY, 2D REMARK 210 NOESY, 2D_CPMG_NOESY, 3D_F1-13C/15N-FILTERED,F3-EDITED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 5.3B, XEASY 1.3.9, DYANA REMARK 210 1.5 REMARK 210 METHOD USED : HYBRID DISTANCE GEOMETRY/ REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 2 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 C B 271 O4' - C1' - N1 ANGL. DEV. = 6.0 DEGREES REMARK 500 1 A B 273 O4' - C1' - N9 ANGL. DEV. = 4.5 DEGREES REMARK 500 1 U B 274 O4' - C1' - N1 ANGL. DEV. = 4.6 DEGREES REMARK 500 1 U B 277 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 1 U B 280 O4' - C1' - N1 ANGL. DEV. = 6.0 DEGREES REMARK 500 1 C B 283 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 1 U B 285 C3' - O3' - P ANGL. DEV. = 7.2 DEGREES REMARK 500 1 G B 292 C2 - N3 - C4 ANGL. DEV. = 3.1 DEGREES REMARK 500 1 G B 292 N3 - C4 - C5 ANGL. DEV. = -3.2 DEGREES REMARK 500 1 G B 293 O4' - C1' - N9 ANGL. DEV. = 4.7 DEGREES REMARK 500 1 U B 295 O4' - C1' - N1 ANGL. DEV. = 5.3 DEGREES REMARK 500 1 C B 297 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 1 G B 305 O4' - C1' - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 1 TYR A 31 CB - CG - CD2 ANGL. DEV. = -3.8 DEGREES REMARK 500 2 C B 270 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 2 C B 271 O4' - C1' - N1 ANGL. DEV. = 5.8 DEGREES REMARK 500 2 U B 274 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 2 U B 277 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 2 U B 280 O4' - C1' - N1 ANGL. DEV. = 5.6 DEGREES REMARK 500 2 U B 282 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 2 C B 283 O4' - C1' - N1 ANGL. DEV. = 5.4 DEGREES REMARK 500 2 G B 292 N3 - C4 - C5 ANGL. DEV. = -3.0 DEGREES REMARK 500 2 U B 295 O4' - C1' - N1 ANGL. DEV. = 5.6 DEGREES REMARK 500 2 C B 297 O4' - C1' - N1 ANGL. DEV. = 4.6 DEGREES REMARK 500 3 C B 270 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 3 C B 271 O4' - C1' - N1 ANGL. DEV. = 6.0 DEGREES REMARK 500 3 U B 274 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 3 U B 277 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 3 U B 280 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 3 U B 282 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 3 U B 295 O4' - C1' - N1 ANGL. DEV. = 4.7 DEGREES REMARK 500 3 C B 297 O4' - C1' - N1 ANGL. DEV. = 5.2 DEGREES REMARK 500 3 U B 307 O4' - C1' - N1 ANGL. DEV. = 4.7 DEGREES REMARK 500 3 ARG A 9 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 4 G B 267 O4' - C1' - N9 ANGL. DEV. = 6.3 DEGREES REMARK 500 4 C B 270 O4' - C1' - N1 ANGL. DEV. = 4.8 DEGREES REMARK 500 4 C B 271 O4' - C1' - N1 ANGL. DEV. = 6.4 DEGREES REMARK 500 4 U B 274 O4' - C1' - N1 ANGL. DEV. = 4.6 DEGREES REMARK 500 4 U B 277 O4' - C1' - N1 ANGL. DEV. = 4.8 DEGREES REMARK 500 4 U B 280 O4' - C1' - N1 ANGL. DEV. = 6.0 DEGREES REMARK 500 4 C B 283 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 4 G B 292 O4' - C1' - N9 ANGL. DEV. = 4.4 DEGREES REMARK 500 4 G B 292 C2 - N3 - C4 ANGL. DEV. = 3.1 DEGREES REMARK 500 4 G B 292 N3 - C4 - C5 ANGL. DEV. = -3.1 DEGREES REMARK 500 4 G B 293 O4' - C1' - N9 ANGL. DEV. = 5.2 DEGREES REMARK 500 4 U B 295 O4' - C1' - N1 ANGL. DEV. = 5.8 DEGREES REMARK 500 4 C B 297 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 4 TYR A 31 CB - CG - CD2 ANGL. DEV. = -4.4 DEGREES REMARK 500 5 C B 270 O4' - C1' - N1 ANGL. DEV. = 5.2 DEGREES REMARK 500 5 C B 271 O4' - C1' - N1 ANGL. DEV. = 6.8 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 239 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 3 103.29 54.27 REMARK 500 1 ALA A 6 -162.20 -124.29 REMARK 500 1 LYS A 14 -27.76 144.16 REMARK 500 1 LYS A 34 -28.96 178.13 REMARK 500 1 GLU A 35 -71.42 -89.15 REMARK 500 1 PRO A 37 -168.88 -66.09 REMARK 500 1 LYS A 46 -77.81 -59.43 REMARK 500 1 TYR A 82 -35.33 -145.16 REMARK 500 1 ARG A 93 92.40 -53.94 REMARK 500 2 THR A 3 100.01 55.22 REMARK 500 2 ASN A 5 92.10 -64.58 REMARK 500 2 GLU A 11 10.42 -66.96 REMARK 500 2 LYS A 14 -28.97 157.01 REMARK 500 2 TYR A 31 -168.80 -119.36 REMARK 500 2 ALA A 36 130.31 61.87 REMARK 500 2 PRO A 37 179.22 -54.02 REMARK 500 2 LYS A 46 -80.06 -61.26 REMARK 500 2 TYR A 82 -56.21 -148.02 REMARK 500 2 ARG A 93 93.54 -57.81 REMARK 500 3 THR A 3 104.22 56.70 REMARK 500 3 ALA A 6 -161.50 -125.38 REMARK 500 3 LYS A 10 12.96 -158.56 REMARK 500 3 LYS A 14 -31.91 141.64 REMARK 500 3 ASN A 24 -9.44 136.90 REMARK 500 3 LYS A 34 -41.18 -143.67 REMARK 500 3 ALA A 36 152.68 63.78 REMARK 500 3 LYS A 46 -75.08 -60.02 REMARK 500 3 GLN A 75 -38.67 -131.19 REMARK 500 3 TYR A 82 -55.20 -147.27 REMARK 500 3 ARG A 93 89.86 -58.09 REMARK 500 4 THR A 3 102.77 58.61 REMARK 500 4 ALA A 6 -161.62 -111.86 REMARK 500 4 LYS A 14 -25.85 135.40 REMARK 500 4 ASN A 24 0.23 136.22 REMARK 500 4 LYS A 34 -26.13 174.59 REMARK 500 4 ALA A 36 163.22 101.66 REMARK 500 4 LYS A 46 -77.65 -58.72 REMARK 500 4 TYR A 82 11.19 -147.56 REMARK 500 4 PRO A 84 49.13 -78.55 REMARK 500 4 HIS A 88 163.78 178.86 REMARK 500 4 ARG A 93 93.45 -58.16 REMARK 500 5 PHE A 2 -78.90 58.97 REMARK 500 5 THR A 3 95.86 62.73 REMARK 500 5 ALA A 6 -161.37 -125.24 REMARK 500 5 LYS A 14 -33.58 140.54 REMARK 500 5 ALA A 23 -85.51 -93.49 REMARK 500 5 ASN A 24 3.63 -176.08 REMARK 500 5 ALA A 36 153.42 61.90 REMARK 500 5 LYS A 46 -73.79 -62.73 REMARK 500 5 ASP A 76 116.35 -160.72 REMARK 500 5 ARG A 93 90.56 -53.30 REMARK 500 6 PHE A 2 -80.10 59.14 REMARK 500 6 THR A 3 100.18 63.59 REMARK 500 6 ASN A 5 96.41 -64.47 REMARK 500 6 ALA A 6 -158.54 -101.10 REMARK 500 6 GLU A 11 13.87 -65.99 REMARK 500 6 LYS A 14 -11.53 -171.10 REMARK 500 6 ALA A 23 -85.12 -102.77 REMARK 500 6 ASN A 24 5.28 -167.75 REMARK 500 6 TYR A 31 -179.75 -61.78 REMARK 500 6 ALA A 36 167.70 70.32 REMARK 500 6 LYS A 46 -81.42 -59.84 REMARK 500 6 TYR A 82 10.22 -147.71 REMARK 500 7 THR A 3 104.83 59.14 REMARK 500 7 ALA A 6 -160.12 -105.17 REMARK 500 7 LYS A 14 -34.44 166.28 REMARK 500 7 ALA A 36 162.04 63.01 REMARK 500 7 LYS A 46 -82.18 -58.90 REMARK 500 7 LYS A 85 -169.69 -79.86 REMARK 500 7 ARG A 93 93.25 -53.52 REMARK 500 8 THR A 3 114.47 62.56 REMARK 500 8 ALA A 6 -161.86 -124.33 REMARK 500 8 LYS A 14 -27.48 131.49 REMARK 500 8 TYR A 31 -169.02 -117.21 REMARK 500 8 LYS A 34 -16.05 72.87 REMARK 500 8 ALA A 36 158.71 107.53 REMARK 500 8 PRO A 37 -166.41 -76.16 REMARK 500 8 LYS A 46 -77.71 -57.56 REMARK 500 8 TYR A 82 -61.66 -135.95 REMARK 500 8 HIS A 88 158.14 178.44 REMARK 500 8 ARG A 93 91.65 -56.57 REMARK 500 9 PHE A 2 -75.89 -62.59 REMARK 500 9 THR A 3 108.03 64.01 REMARK 500 9 ALA A 6 -166.26 -128.41 REMARK 500 9 GLU A 11 13.54 -67.63 REMARK 500 9 LYS A 14 -19.48 149.06 REMARK 500 9 ALA A 23 -88.59 -99.54 REMARK 500 9 ASN A 24 7.99 -168.77 REMARK 500 9 LYS A 34 -48.95 -131.36 REMARK 500 9 GLU A 35 -63.38 -131.12 REMARK 500 9 PRO A 37 -169.34 -70.64 REMARK 500 9 LYS A 46 -75.05 -60.98 REMARK 500 9 ARG A 93 98.74 -57.58 REMARK 500 10 PHE A 2 -31.37 75.34 REMARK 500 10 THR A 3 109.80 64.80 REMARK 500 10 ALA A 6 -161.39 -125.77 REMARK 500 10 LYS A 14 -26.87 167.36 REMARK 500 10 ALA A 23 -85.78 -107.14 REMARK 500 10 ASN A 24 8.25 -167.99 REMARK 500 10 LYS A 34 -28.91 170.22 REMARK 500 10 ALA A 36 167.18 75.42 REMARK 500 10 LYS A 46 -76.21 -58.52 REMARK 500 10 ALA A 54 -38.02 62.93 REMARK 500 10 GLN A 75 -43.94 -133.54 REMARK 500 10 TYR A 82 -57.16 -144.28 REMARK 500 10 LYS A 85 -164.26 -77.05 REMARK 500 10 ARG A 93 91.48 -61.88 REMARK 500 11 THR A 3 101.27 57.49 REMARK 500 11 ALA A 6 -161.96 -117.55 REMARK 500 11 GLU A 11 7.29 -68.05 REMARK 500 11 LYS A 14 -19.46 74.82 REMARK 500 11 LYS A 34 -18.12 71.81 REMARK 500 11 GLU A 35 -75.20 -97.55 REMARK 500 11 PRO A 37 -168.57 -72.81 REMARK 500 11 LYS A 46 -75.31 -59.83 REMARK 500 11 TYR A 82 10.68 -148.54 REMARK 500 11 ARG A 93 91.94 -59.85 REMARK 500 12 PHE A 2 -31.56 76.48 REMARK 500 12 THR A 3 108.31 68.00 REMARK 500 12 ALA A 6 -161.19 -122.95 REMARK 500 12 GLU A 11 12.79 -68.23 REMARK 500 12 LYS A 14 -34.16 160.89 REMARK 500 12 ALA A 23 -92.84 -96.95 REMARK 500 12 ASN A 24 9.92 -165.74 REMARK 500 12 LYS A 34 -55.67 -167.49 REMARK 500 12 LYS A 46 -77.77 -59.04 REMARK 500 12 ARG A 93 95.86 -56.30 REMARK 500 13 ALA A 6 -161.39 -122.48 REMARK 500 13 LYS A 14 -30.61 124.86 REMARK 500 13 ALA A 36 178.76 57.67 REMARK 500 13 LYS A 46 -81.81 -61.20 REMARK 500 13 ARG A 93 93.99 -59.03 REMARK 500 14 THR A 3 120.19 65.43 REMARK 500 14 ILE A 4 79.10 -115.36 REMARK 500 14 LYS A 14 -17.87 -155.69 REMARK 500 14 LYS A 34 -49.74 -147.27 REMARK 500 14 ALA A 36 152.84 65.44 REMARK 500 14 PRO A 37 -179.75 -59.91 REMARK 500 14 LYS A 46 -78.28 -59.94 REMARK 500 14 TYR A 82 -57.46 -143.48 REMARK 500 14 LYS A 85 -169.76 -71.86 REMARK 500 14 ARG A 93 99.66 -56.53 REMARK 500 15 PHE A 2 -83.01 58.43 REMARK 500 15 THR A 3 103.77 67.46 REMARK 500 15 ALA A 6 -161.87 -121.64 REMARK 500 15 GLU A 11 15.54 -69.92 REMARK 500 15 LYS A 14 -21.23 136.41 REMARK 500 15 LYS A 34 -48.46 -138.45 REMARK 500 15 ALA A 36 151.94 65.84 REMARK 500 15 LYS A 46 -74.28 -59.32 REMARK 500 15 ARG A 93 94.44 -57.54 REMARK 500 16 PHE A 2 -71.01 -41.72 REMARK 500 16 THR A 3 96.68 60.55 REMARK 500 16 ALA A 6 -161.69 -122.32 REMARK 500 16 LYS A 14 -36.80 168.36 REMARK 500 16 LYS A 34 -7.90 -168.32 REMARK 500 16 ALA A 36 161.37 73.45 REMARK 500 16 LYS A 46 -77.46 -57.69 REMARK 500 16 MET A 50 -70.96 -82.74 REMARK 500 16 ASP A 76 103.15 -161.16 REMARK 500 16 TYR A 82 12.07 -148.64 REMARK 500 16 HIS A 88 159.70 177.41 REMARK 500 16 ARG A 93 93.90 -52.63 REMARK 500 17 PHE A 2 -77.66 60.68 REMARK 500 17 THR A 3 97.48 59.63 REMARK 500 17 ALA A 6 -161.18 -119.86 REMARK 500 17 GLU A 11 15.74 -66.96 REMARK 500 17 LYS A 14 -17.96 -159.74 REMARK 500 17 LYS A 34 -31.49 -178.14 REMARK 500 17 ALA A 36 164.13 171.44 REMARK 500 17 LYS A 46 -78.40 -56.78 REMARK 500 17 GLN A 75 -43.81 -131.94 REMARK 500 17 TYR A 82 -39.68 -144.92 REMARK 500 17 ARG A 93 96.07 -57.26 REMARK 500 18 PHE A 2 -78.53 -56.06 REMARK 500 18 THR A 3 103.54 57.82 REMARK 500 18 ALA A 6 -161.66 -127.15 REMARK 500 18 GLU A 11 14.13 -69.72 REMARK 500 18 LYS A 14 -37.51 139.71 REMARK 500 18 ALA A 23 -86.97 -101.56 REMARK 500 18 ASN A 24 9.46 -168.83 REMARK 500 18 LYS A 34 -38.27 -177.13 REMARK 500 18 GLU A 35 -71.23 -87.59 REMARK 500 18 PRO A 37 -166.03 -72.88 REMARK 500 18 LYS A 46 -75.28 -62.42 REMARK 500 18 LYS A 85 99.57 -53.53 REMARK 500 18 ARG A 93 90.14 -67.96 REMARK 500 19 THR A 3 98.50 63.26 REMARK 500 19 ASN A 5 109.27 -58.11 REMARK 500 19 ALA A 6 -161.35 -113.54 REMARK 500 19 GLU A 11 14.07 -67.45 REMARK 500 19 LYS A 14 -11.85 -163.87 REMARK 500 19 LYS A 34 -35.71 -172.18 REMARK 500 19 ALA A 36 166.25 161.70 REMARK 500 19 LEU A 38 105.65 -160.20 REMARK 500 19 LYS A 46 -78.10 -56.91 REMARK 500 19 TYR A 82 -57.79 -146.73 REMARK 500 19 LYS A 85 -164.07 -77.56 REMARK 500 19 ARG A 93 91.87 -58.45 REMARK 500 20 ASN A 5 109.61 -56.88 REMARK 500 20 ALA A 6 -162.34 -113.34 REMARK 500 20 GLU A 11 10.36 -68.30 REMARK 500 20 LYS A 14 -11.06 -157.52 REMARK 500 20 LYS A 34 -46.07 -146.70 REMARK 500 20 ALA A 36 164.92 66.66 REMARK 500 20 LYS A 46 -76.76 -58.85 REMARK 500 20 TYR A 82 -56.25 -137.90 REMARK 500 20 LYS A 85 -169.98 -75.13 REMARK 500 20 ARG A 93 95.22 -57.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 A B 273 0.06 SIDE_CHAIN REMARK 500 1 G B 275 0.09 SIDE_CHAIN REMARK 500 1 G B 276 0.11 SIDE_CHAIN REMARK 500 1 U B 284 0.07 SIDE_CHAIN REMARK 500 1 A B 299 0.07 SIDE_CHAIN REMARK 500 1 G B 306 0.09 SIDE_CHAIN REMARK 500 2 G B 268 0.07 SIDE_CHAIN REMARK 500 2 A B 269 0.06 SIDE_CHAIN REMARK 500 2 A B 273 0.09 SIDE_CHAIN REMARK 500 2 G B 275 0.13 SIDE_CHAIN REMARK 500 2 G B 276 0.07 SIDE_CHAIN REMARK 500 2 U B 282 0.06 SIDE_CHAIN REMARK 500 2 U B 284 0.06 SIDE_CHAIN REMARK 500 2 C B 291 0.07 SIDE_CHAIN REMARK 500 2 G B 292 0.07 SIDE_CHAIN REMARK 500 2 G B 293 0.09 SIDE_CHAIN REMARK 500 2 A B 294 0.08 SIDE_CHAIN REMARK 500 2 A B 299 0.07 SIDE_CHAIN REMARK 500 2 G B 306 0.07 SIDE_CHAIN REMARK 500 2 PHE A 26 0.11 SIDE_CHAIN REMARK 500 3 G B 268 0.06 SIDE_CHAIN REMARK 500 3 A B 269 0.06 SIDE_CHAIN REMARK 500 3 A B 273 0.08 SIDE_CHAIN REMARK 500 3 G B 275 0.09 SIDE_CHAIN REMARK 500 3 G B 276 0.07 SIDE_CHAIN REMARK 500 3 U B 284 0.06 SIDE_CHAIN REMARK 500 3 G B 292 0.07 SIDE_CHAIN REMARK 500 3 C B 297 0.08 SIDE_CHAIN REMARK 500 3 G B 298 0.06 SIDE_CHAIN REMARK 500 3 A B 299 0.06 SIDE_CHAIN REMARK 500 3 G B 306 0.08 SIDE_CHAIN REMARK 500 3 PHE A 26 0.10 SIDE_CHAIN REMARK 500 4 A B 273 0.10 SIDE_CHAIN REMARK 500 4 G B 275 0.13 SIDE_CHAIN REMARK 500 4 G B 276 0.05 SIDE_CHAIN REMARK 500 4 U B 284 0.10 SIDE_CHAIN REMARK 500 4 PHE A 26 0.09 SIDE_CHAIN REMARK 500 5 G B 268 0.06 SIDE_CHAIN REMARK 500 5 A B 273 0.10 SIDE_CHAIN REMARK 500 5 G B 275 0.10 SIDE_CHAIN REMARK 500 5 U B 282 0.07 SIDE_CHAIN REMARK 500 5 C B 291 0.07 SIDE_CHAIN REMARK 500 5 G B 293 0.10 SIDE_CHAIN REMARK 500 5 G B 296 0.07 SIDE_CHAIN REMARK 500 5 A B 299 0.09 SIDE_CHAIN REMARK 500 5 G B 306 0.09 SIDE_CHAIN REMARK 500 5 U B 307 0.09 SIDE_CHAIN REMARK 500 5 PHE A 26 0.09 SIDE_CHAIN REMARK 500 6 A B 273 0.05 SIDE_CHAIN REMARK 500 6 G B 275 0.07 SIDE_CHAIN REMARK 500 6 G B 276 0.07 SIDE_CHAIN REMARK 500 6 U B 277 0.09 SIDE_CHAIN REMARK 500 6 U B 284 0.08 SIDE_CHAIN REMARK 500 6 G B 298 0.07 SIDE_CHAIN REMARK 500 6 A B 299 0.05 SIDE_CHAIN REMARK 500 6 A B 304 0.06 SIDE_CHAIN REMARK 500 6 TYR A 31 0.07 SIDE_CHAIN REMARK 500 7 A B 273 0.07 SIDE_CHAIN REMARK 500 7 U B 280 0.07 SIDE_CHAIN REMARK 500 7 G B 292 0.12 SIDE_CHAIN REMARK 500 7 A B 294 0.07 SIDE_CHAIN REMARK 500 7 U B 295 0.08 SIDE_CHAIN REMARK 500 7 A B 299 0.08 SIDE_CHAIN REMARK 500 7 G B 300 0.06 SIDE_CHAIN REMARK 500 8 G B 268 0.07 SIDE_CHAIN REMARK 500 8 A B 273 0.07 SIDE_CHAIN REMARK 500 8 G B 275 0.11 SIDE_CHAIN REMARK 500 8 G B 276 0.11 SIDE_CHAIN REMARK 500 8 U B 277 0.07 SIDE_CHAIN REMARK 500 8 G B 281 0.06 SIDE_CHAIN REMARK 500 8 U B 282 0.06 SIDE_CHAIN REMARK 500 8 U B 284 0.06 SIDE_CHAIN REMARK 500 8 C B 297 0.13 SIDE_CHAIN REMARK 500 8 A B 299 0.08 SIDE_CHAIN REMARK 500 8 G B 300 0.05 SIDE_CHAIN REMARK 500 8 G B 306 0.07 SIDE_CHAIN REMARK 500 8 C B 308 0.07 SIDE_CHAIN REMARK 500 8 PHE A 26 0.11 SIDE_CHAIN REMARK 500 9 C B 271 0.06 SIDE_CHAIN REMARK 500 9 A B 273 0.08 SIDE_CHAIN REMARK 500 9 G B 276 0.06 SIDE_CHAIN REMARK 500 9 U B 280 0.07 SIDE_CHAIN REMARK 500 9 A B 294 0.07 SIDE_CHAIN REMARK 500 9 U B 295 0.07 SIDE_CHAIN REMARK 500 9 G B 298 0.06 SIDE_CHAIN REMARK 500 9 A B 299 0.10 SIDE_CHAIN REMARK 500 9 PHE A 26 0.09 SIDE_CHAIN REMARK 500 9 TYR A 31 0.08 SIDE_CHAIN REMARK 500 10 G B 268 0.11 SIDE_CHAIN REMARK 500 10 G B 272 0.06 SIDE_CHAIN REMARK 500 10 A B 273 0.13 SIDE_CHAIN REMARK 500 10 U B 280 0.07 SIDE_CHAIN REMARK 500 10 U B 284 0.07 SIDE_CHAIN REMARK 500 10 G B 293 0.10 SIDE_CHAIN REMARK 500 10 A B 294 0.07 SIDE_CHAIN REMARK 500 10 A B 299 0.08 SIDE_CHAIN REMARK 500 10 G B 306 0.10 SIDE_CHAIN REMARK 500 10 PHE A 26 0.10 SIDE_CHAIN REMARK 500 11 G B 268 0.09 SIDE_CHAIN REMARK 500 11 A B 273 0.08 SIDE_CHAIN REMARK 500 11 C B 291 0.13 SIDE_CHAIN REMARK 500 11 G B 292 0.11 SIDE_CHAIN REMARK 500 11 A B 299 0.07 SIDE_CHAIN REMARK 500 11 G B 300 0.06 SIDE_CHAIN REMARK 500 11 G B 306 0.07 SIDE_CHAIN REMARK 500 11 ARG A 19 0.11 SIDE_CHAIN REMARK 500 11 PHE A 26 0.09 SIDE_CHAIN REMARK 500 12 C B 271 0.07 SIDE_CHAIN REMARK 500 12 A B 273 0.10 SIDE_CHAIN REMARK 500 12 G B 275 0.07 SIDE_CHAIN REMARK 500 12 G B 276 0.07 SIDE_CHAIN REMARK 500 12 U B 284 0.10 SIDE_CHAIN REMARK 500 12 G B 292 0.07 SIDE_CHAIN REMARK 500 12 A B 294 0.08 SIDE_CHAIN REMARK 500 12 U B 295 0.06 SIDE_CHAIN REMARK 500 12 G B 296 0.06 SIDE_CHAIN REMARK 500 12 A B 299 0.08 SIDE_CHAIN REMARK 500 12 G B 300 0.06 SIDE_CHAIN REMARK 500 12 G B 306 0.06 SIDE_CHAIN REMARK 500 12 PHE A 26 0.12 SIDE_CHAIN REMARK 500 13 A B 273 0.06 SIDE_CHAIN REMARK 500 13 G B 276 0.09 SIDE_CHAIN REMARK 500 13 U B 277 0.07 SIDE_CHAIN REMARK 500 13 U B 284 0.07 SIDE_CHAIN REMARK 500 13 G B 292 0.10 SIDE_CHAIN REMARK 500 13 G B 296 0.08 SIDE_CHAIN REMARK 500 13 A B 299 0.09 SIDE_CHAIN REMARK 500 13 PHE A 26 0.11 SIDE_CHAIN REMARK 500 13 TYR A 57 0.10 SIDE_CHAIN REMARK 500 14 A B 273 0.07 SIDE_CHAIN REMARK 500 14 G B 275 0.06 SIDE_CHAIN REMARK 500 14 G B 276 0.05 SIDE_CHAIN REMARK 500 14 U B 280 0.10 SIDE_CHAIN REMARK 500 14 U B 284 0.10 SIDE_CHAIN REMARK 500 14 G B 292 0.09 SIDE_CHAIN REMARK 500 14 A B 294 0.09 SIDE_CHAIN REMARK 500 14 C B 297 0.06 SIDE_CHAIN REMARK 500 14 G B 298 0.05 SIDE_CHAIN REMARK 500 14 A B 299 0.11 SIDE_CHAIN REMARK 500 14 ARG A 9 0.09 SIDE_CHAIN REMARK 500 14 ARG A 18 0.08 SIDE_CHAIN REMARK 500 14 PHE A 26 0.11 SIDE_CHAIN REMARK 500 15 G B 268 0.09 SIDE_CHAIN REMARK 500 15 G B 272 0.07 SIDE_CHAIN REMARK 500 15 A B 273 0.05 SIDE_CHAIN REMARK 500 15 G B 275 0.08 SIDE_CHAIN REMARK 500 15 G B 276 0.07 SIDE_CHAIN REMARK 500 15 U B 280 0.07 SIDE_CHAIN REMARK 500 15 U B 284 0.08 SIDE_CHAIN REMARK 500 15 G B 292 0.13 SIDE_CHAIN REMARK 500 15 G B 293 0.06 SIDE_CHAIN REMARK 500 15 A B 299 0.10 SIDE_CHAIN REMARK 500 15 G B 306 0.07 SIDE_CHAIN REMARK 500 15 U B 307 0.09 SIDE_CHAIN REMARK 500 15 ARG A 19 0.08 SIDE_CHAIN REMARK 500 15 PHE A 26 0.10 SIDE_CHAIN REMARK 500 16 G B 268 0.06 SIDE_CHAIN REMARK 500 16 A B 273 0.09 SIDE_CHAIN REMARK 500 16 G B 275 0.09 SIDE_CHAIN REMARK 500 16 G B 276 0.11 SIDE_CHAIN REMARK 500 16 U B 284 0.18 SIDE_CHAIN REMARK 500 16 U B 285 0.07 SIDE_CHAIN REMARK 500 16 G B 292 0.08 SIDE_CHAIN REMARK 500 16 G B 293 0.11 SIDE_CHAIN REMARK 500 16 A B 299 0.05 SIDE_CHAIN REMARK 500 16 G B 306 0.07 SIDE_CHAIN REMARK 500 16 ARG A 19 0.08 SIDE_CHAIN REMARK 500 16 PHE A 26 0.12 SIDE_CHAIN REMARK 500 17 A B 273 0.11 SIDE_CHAIN REMARK 500 17 G B 275 0.10 SIDE_CHAIN REMARK 500 17 G B 276 0.09 SIDE_CHAIN REMARK 500 17 U B 284 0.11 SIDE_CHAIN REMARK 500 17 G B 292 0.07 SIDE_CHAIN REMARK 500 17 A B 299 0.06 SIDE_CHAIN REMARK 500 17 ARG A 9 0.10 SIDE_CHAIN REMARK 500 17 PHE A 26 0.09 SIDE_CHAIN REMARK 500 18 C B 271 0.07 SIDE_CHAIN REMARK 500 18 A B 273 0.12 SIDE_CHAIN REMARK 500 18 G B 276 0.09 SIDE_CHAIN REMARK 500 18 U B 282 0.07 SIDE_CHAIN REMARK 500 18 U B 284 0.11 SIDE_CHAIN REMARK 500 18 C B 291 0.06 SIDE_CHAIN REMARK 500 18 A B 299 0.10 SIDE_CHAIN REMARK 500 18 G B 300 0.06 SIDE_CHAIN REMARK 500 18 G B 306 0.06 SIDE_CHAIN REMARK 500 18 PHE A 26 0.10 SIDE_CHAIN REMARK 500 19 A B 273 0.10 SIDE_CHAIN REMARK 500 19 G B 275 0.10 SIDE_CHAIN REMARK 500 19 G B 276 0.08 SIDE_CHAIN REMARK 500 19 U B 284 0.11 SIDE_CHAIN REMARK 500 19 G B 292 0.14 SIDE_CHAIN REMARK 500 19 G B 298 0.06 SIDE_CHAIN REMARK 500 19 A B 299 0.08 SIDE_CHAIN REMARK 500 19 G B 306 0.10 SIDE_CHAIN REMARK 500 19 U B 307 0.07 SIDE_CHAIN REMARK 500 19 PHE A 26 0.09 SIDE_CHAIN REMARK 500 20 G B 268 0.07 SIDE_CHAIN REMARK 500 20 A B 273 0.07 SIDE_CHAIN REMARK 500 20 G B 275 0.11 SIDE_CHAIN REMARK 500 20 G B 276 0.06 SIDE_CHAIN REMARK 500 20 U B 284 0.12 SIDE_CHAIN REMARK 500 20 C B 291 0.06 SIDE_CHAIN REMARK 500 20 G B 292 0.07 SIDE_CHAIN REMARK 500 20 A B 299 0.10 SIDE_CHAIN REMARK 500 20 A B 304 0.06 SIDE_CHAIN REMARK 500 20 PHE A 26 0.10 SIDE_CHAIN REMARK 500 20 TYR A 31 0.13 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
DBREF 1D6K A 1 94 UNP P68919 RL25_ECOLI 1 94 DBREF 1D6K B 267 308 PDB 1D6K 1D6K 267 308
SEQRES 1 A 94 MET PHE THR ILE ASN ALA GLU VAL ARG LYS GLU GLN GLY SEQRES 2 A 94 LYS GLY ALA SER ARG ARG LEU ARG ALA ALA ASN LYS PHE SEQRES 3 A 94 PRO ALA ILE ILE TYR GLY GLY LYS GLU ALA PRO LEU ALA SEQRES 4 A 94 ILE GLU LEU ASP HIS ASP LYS VAL MET ASN MET GLN ALA SEQRES 5 A 94 LYS ALA GLU PHE TYR SER GLU VAL LEU THR ILE VAL VAL SEQRES 6 A 94 ASP GLY LYS GLU ILE LYS VAL LYS ALA GLN ASP VAL GLN SEQRES 7 A 94 ARG HIS PRO TYR LYS PRO LYS LEU GLN HIS ILE ASP PHE SEQRES 8 A 94 VAL ARG ALA SEQRES 1 B 37 G G A C C G A U G G U A G SEQRES 2 B 37 U G U C U U C G G A U G C SEQRES 3 B 37 G A G A G U A G G U C
HELIX 1 1 LYS A 14 ARG A 21 1 8 HELIX 2 2 HIS A 44 ALA A 52 1 9 HELIX 3 3 ALA A 54 GLU A 59 1 6
SHEET 1 A 7 ALA A 6 VAL A 8 0 SHEET 2 A 7 LEU A 38 ASP A 43 -1 N GLU A 41 O GLU A 7 SHEET 3 A 7 LYS A 25 TYR A 31 -1 N PHE A 26 O LEU A 42 SHEET 4 A 7 LEU A 86 ARG A 93 1 O ILE A 89 N ILE A 29 SHEET 5 A 7 LYS A 68 ARG A 79 -1 O LYS A 73 N VAL A 92 SHEET 6 A 7 LEU A 61 VAL A 65 -1 N LEU A 61 O VAL A 72 SHEET 7 A 7 ALA A 6 VAL A 8 1 N ALA A 6 O VAL A 64
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000