10 20 30 40 50 60 70 80 1D68 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER DNA 15-APR-92 1D68
TITLE SOLUTION STRUCTURE OF [D(GCGTATACGC)]2
COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(P*GP*CP*GP*TP*AP*TP*AP*CP*GP*C)-3'); COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: CHEMICALLY SYNTHESIZED
KEYWDS DNA, NMR, DOUBLE HELIX
EXPDTA SOLUTION NMR
AUTHOR J.-W.CHENG,S.-H.CHOU,M.SALAZAR,B.R.REID
REVDAT 3 24-FEB-09 1D68 1 VERSN REVDAT 2 01-APR-03 1D68 1 JRNL REVDAT 1 15-APR-93 1D68 0
JRNL AUTH J.W.CHENG,S.H.CHOU,M.SALAZAR,B.R.REID JRNL TITL SOLUTION STRUCTURE OF [D(GCGTATACGC)]2. JRNL REF J.MOL.BIOL. V. 228 118 1992 JRNL REFN ISSN 0022-2836 JRNL PMID 1447776 JRNL DOI 10.1016/0022-2836(92)90496-7
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1D68 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG A 1 P DG A 1 OP2 0.115 REMARK 500 DG A 1 P DG A 1 OP3 -0.127 REMARK 500 DG A 1 O3' DG A 1 C3' -0.039 REMARK 500 DT A 4 C5 DT A 4 C6 0.055 REMARK 500 DT A 6 C5 DT A 6 C6 0.053 REMARK 500 DA A 7 O3' DA A 7 C3' -0.043 REMARK 500 DG B 11 P DG B 11 OP2 0.115 REMARK 500 DG B 11 P DG B 11 OP3 -0.126 REMARK 500 DG B 11 O3' DG B 11 C3' -0.036 REMARK 500 DT B 14 C5 DT B 14 C6 0.055 REMARK 500 DA B 15 O3' DA B 15 C3' -0.036 REMARK 500 DT B 16 C5 DT B 16 C6 0.054 REMARK 500 DA B 17 O3' DA B 17 C3' -0.043 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG A 1 OP1 - P - OP2 ANGL. DEV. = -10.3 DEGREES REMARK 500 DG A 1 C3' - O3' - P ANGL. DEV. = 12.1 DEGREES REMARK 500 DT A 4 N1 - C2 - N3 ANGL. DEV. = 3.7 DEGREES REMARK 500 DT A 4 C2 - N3 - C4 ANGL. DEV. = -4.5 DEGREES REMARK 500 DT A 4 C5 - C6 - N1 ANGL. DEV. = -3.9 DEGREES REMARK 500 DG A 3 C3' - O3' - P ANGL. DEV. = 9.1 DEGREES REMARK 500 DA A 5 O4' - C1' - N9 ANGL. DEV. = -6.2 DEGREES REMARK 500 DT A 4 C3' - O3' - P ANGL. DEV. = 7.4 DEGREES REMARK 500 DT A 6 N1 - C2 - N3 ANGL. DEV. = 3.7 DEGREES REMARK 500 DT A 6 C2 - N3 - C4 ANGL. DEV. = -4.4 DEGREES REMARK 500 DT A 6 C5 - C6 - N1 ANGL. DEV. = -3.8 DEGREES REMARK 500 DA A 5 C3' - O3' - P ANGL. DEV. = 12.5 DEGREES REMARK 500 DT A 6 C3' - O3' - P ANGL. DEV. = 9.9 DEGREES REMARK 500 DA A 7 C3' - O3' - P ANGL. DEV. = 12.8 DEGREES REMARK 500 DC A 8 C3' - O3' - P ANGL. DEV. = 7.5 DEGREES REMARK 500 DG B 11 OP1 - P - OP2 ANGL. DEV. = -10.3 DEGREES REMARK 500 DG B 11 C3' - O3' - P ANGL. DEV. = 12.1 DEGREES REMARK 500 DT B 14 N1 - C2 - N3 ANGL. DEV. = 3.7 DEGREES REMARK 500 DT B 14 C2 - N3 - C4 ANGL. DEV. = -4.6 DEGREES REMARK 500 DT B 14 C5 - C6 - N1 ANGL. DEV. = -3.9 DEGREES REMARK 500 DG B 13 C3' - O3' - P ANGL. DEV. = 9.0 DEGREES REMARK 500 DA B 15 O4' - C1' - N9 ANGL. DEV. = -6.1 DEGREES REMARK 500 DT B 14 C3' - O3' - P ANGL. DEV. = 7.4 DEGREES REMARK 500 DT B 16 N1 - C2 - N3 ANGL. DEV. = 3.8 DEGREES REMARK 500 DT B 16 C2 - N3 - C4 ANGL. DEV. = -4.4 DEGREES REMARK 500 DT B 16 C5 - C6 - N1 ANGL. DEV. = -3.7 DEGREES REMARK 500 DA B 15 C3' - O3' - P ANGL. DEV. = 12.5 DEGREES REMARK 500 DT B 16 C3' - O3' - P ANGL. DEV. = 9.9 DEGREES REMARK 500 DA B 17 C3' - O3' - P ANGL. DEV. = 12.8 DEGREES REMARK 500 DC B 18 C3' - O3' - P ANGL. DEV. = 7.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DA A 5 0.06 SIDE_CHAIN REMARK 500 DG A 9 0.06 SIDE_CHAIN REMARK 500 DA B 15 0.06 SIDE_CHAIN REMARK 500 DG B 19 0.06 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
DBREF 1D68 A 1 10 PDB 1D68 1D68 1 10 DBREF 1D68 B 11 20 PDB 1D68 1D68 11 20
SEQRES 1 A 10 DG DC DG DT DA DT DA DC DG DC SEQRES 1 B 10 DG DC DG DT DA DT DA DC DG DC
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000