10 20 30 40 50 60 70 80 1D2D - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LIGASE 23-SEP-99 1D2D
TITLE HAMSTER EPRS SECOND REPEATED ELEMENT. NMR, 5 STRUCTURES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRNA SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-59; COMPND 5 SYNONYM: TRNA LIGASE; COMPND 6 EC: 6.1.1.-; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 ORGAN: OVARY CELLS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B
KEYWDS TRNA SYNTHETASE (LIGASE), PROTEIN TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 5
AUTHOR B.CAHUZAC,E.BERTHONNEAU,N.BIRLIRAKIS,E.GUITTET,M.MIRANDE
REVDAT 2 24-FEB-09 1D2D 1 VERSN REVDAT 1 24-MAY-00 1D2D 0
JRNL AUTH B.CAHUZAC,E.BERTHONNEAU,N.BIRLIRAKIS,E.GUITTET, JRNL AUTH 2 M.MIRANDE JRNL TITL A RECURRENT RNA-BINDING DOMAIN IS APPENDED TO JRNL TITL 2 EUKARYOTIC AMINOACYL-TRNA SYNTHETASES. JRNL REF EMBO J. V. 19 445 2000 JRNL REFN ISSN 0261-4189 JRNL PMID 10654942 JRNL DOI 10.1093/EMBOJ/19.3.445
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER A.T. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1D2D COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-SEP-99. REMARK 100 THE RCSB ID CODE IS RCSB009728.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.5 MM EPRS REPEAT U-15N; 20 REMARK 210 MM POTASSIUM PHOSPHATE PH 7.0, REMARK 210 5 MM DITHIOTHREITOL, 0.5 MM REMARK 210 NAN3; REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 3D_15N-SEPARATED_ REMARK 210 NOESY, HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : DMX, DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 97.0, XWINNMR 2.5, GIFA REMARK 210 4.0, DIANA 1.0 REMARK 210 METHOD USED : DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 40 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 5 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-5 REMARK 465 RES C SSSEQI REMARK 465 HIS A 57 REMARK 465 HIS A 58 REMARK 465 HIS A 59
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 4 -111.12 -66.23 REMARK 500 1 ALA A 8 -70.89 -36.18 REMARK 500 1 LYS A 20 102.53 75.01 REMARK 500 1 TYR A 40 -89.02 -54.21 REMARK 500 1 LYS A 41 45.06 32.98 REMARK 500 1 GLU A 42 -73.93 -67.67 REMARK 500 1 LYS A 43 42.71 -175.26 REMARK 500 1 THR A 44 -68.61 -134.45 REMARK 500 1 LYS A 46 106.00 63.50 REMARK 500 1 PRO A 50 -70.50 -87.99 REMARK 500 1 GLU A 53 97.08 58.20 REMARK 500 1 HIS A 54 135.83 67.00 REMARK 500 2 VAL A 2 -159.52 -83.87 REMARK 500 2 ASP A 4 -93.14 -73.79 REMARK 500 2 LYS A 20 97.34 75.52 REMARK 500 2 TYR A 40 -91.07 -67.32 REMARK 500 2 LYS A 41 46.33 34.02 REMARK 500 2 GLU A 42 -76.05 -70.08 REMARK 500 2 LYS A 43 41.91 -173.27 REMARK 500 2 THR A 44 -67.10 -136.66 REMARK 500 2 LYS A 46 102.47 62.43 REMARK 500 2 TYR A 48 150.93 -40.43 REMARK 500 2 LEU A 52 -82.85 -87.14 REMARK 500 2 HIS A 54 142.59 77.03 REMARK 500 3 VAL A 2 160.73 70.25 REMARK 500 3 ASP A 4 -101.25 -70.59 REMARK 500 3 ALA A 8 -70.55 -37.11 REMARK 500 3 LYS A 20 102.84 74.95 REMARK 500 3 TYR A 40 -88.29 -61.86 REMARK 500 3 LYS A 41 45.10 27.96 REMARK 500 3 GLU A 42 -71.22 -69.28 REMARK 500 3 LYS A 43 45.06 -175.09 REMARK 500 3 THR A 44 -69.32 -139.67 REMARK 500 3 LYS A 46 104.98 60.60 REMARK 500 3 TYR A 48 155.96 -39.49 REMARK 500 3 LEU A 52 -75.33 -78.70 REMARK 500 3 HIS A 54 82.17 72.67 REMARK 500 4 ASP A 4 -105.45 -68.31 REMARK 500 4 ALA A 8 -74.72 -36.02 REMARK 500 4 LYS A 20 104.32 75.36 REMARK 500 4 TYR A 40 -88.49 -48.77 REMARK 500 4 LYS A 41 46.22 29.00 REMARK 500 4 GLU A 42 -71.00 -72.74 REMARK 500 4 LYS A 43 44.46 -172.18 REMARK 500 4 THR A 44 -72.37 -137.62 REMARK 500 4 LYS A 46 105.51 61.97 REMARK 500 4 TYR A 48 143.28 -39.46 REMARK 500 4 LEU A 52 -84.09 -81.26 REMARK 500 4 HIS A 54 94.50 73.68 REMARK 500 5 ASP A 4 -103.80 -70.43 REMARK 500 5 ALA A 8 -70.87 -36.06 REMARK 500 5 LYS A 20 101.07 74.90 REMARK 500 5 TYR A 40 -89.66 -58.12 REMARK 500 5 LYS A 41 48.03 28.51 REMARK 500 5 LYS A 43 45.99 -173.23 REMARK 500 5 THR A 44 -71.33 -140.37 REMARK 500 5 LYS A 46 103.21 64.33 REMARK 500 5 LEU A 52 -75.70 -82.84 REMARK 500 5 HIS A 54 112.59 81.22 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1R1B RELATED DB: PDB
DBREF 1D2D A 3 51 UNP Q7SIA2 SYEP_CRIGR 1 49
SEQRES 1 A 59 MET VAL TYR ASP LYS ILE ALA ALA GLN GLY GLU VAL VAL SEQRES 2 A 59 ARG LYS LEU LYS ALA GLU LYS ALA PRO LYS ALA LYS VAL SEQRES 3 A 59 THR GLU ALA VAL GLU CYS LEU LEU SER LEU LYS ALA GLU SEQRES 4 A 59 TYR LYS GLU LYS THR GLY LYS GLU TYR VAL PRO GLY LEU SEQRES 5 A 59 GLU HIS HIS HIS HIS HIS HIS
HELIX 1 1 TYR A 3 GLU A 19 1 17 HELIX 2 2 PRO A 22 LYS A 41 1 20
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000