10 20 30 40 50 60 70 80 1CR8 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LIPID BINDING PROTEIN 14-DEC-98 1CR8
TITLE LOW DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN COMPLEMENT TITLE 2 REPEAT 8
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (LOW DENSITY LIPOPROTEIN RECEPTOR COMPND 3 RELATED PROTEIN); COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: COMPLEMENT REPEAT 8; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 ORGAN: LIVER, PLACENTA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: BL21; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-2T
KEYWDS RECEPTOR, LIGAND BINDING, CALCIUM BINDING, LDLR, LRP, LIPID KEYWDS 2 BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR W.HUANG,K.DOLMER,P.G.W.GETTINS
REVDAT 5 24-FEB-09 1CR8 1 VERSN REVDAT 4 01-APR-03 1CR8 1 JRNL REVDAT 3 29-DEC-99 1CR8 4 HEADER COMPND REMARK JRNL REVDAT 3 2 4 ATOM SOURCE SEQRES REVDAT 2 06-JAN-99 1CR8 3 HET REMARK HETATM SEQRES REVDAT 2 2 3 FORMUL EXPDTA SSBOND HETNAM REVDAT 1 23-DEC-98 1CR8 0
JRNL AUTH W.HUANG,K.DOLMER,P.G.GETTINS JRNL TITL NMR SOLUTION STRUCTURE OF COMPLEMENT-LIKE REPEAT JRNL TITL 2 CR8 FROM THE LOW DENSITY LIPOPROTEIN JRNL TITL 3 RECEPTOR-RELATED PROTEIN. JRNL REF J.BIOL.CHEM. V. 274 14130 1999 JRNL REFN ISSN 0021-9258 JRNL PMID 10318830 JRNL DOI 10.1074/JBC.274.20.14130
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER REMARK 3 AUTHORS : PEARLMAN,CASE,CALDWELL,ROSS,CHEATHAM, FERGUSON, REMARK 3 SEIBEL,SINGH,WEINER,KOLLMAN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ENERGY MINIMIZATION
REMARK 4 REMARK 4 1CR8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-98. REMARK 100 THE RCSB ID CODE IS RCSB000276.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : 0.05 REMARK 210 PRESSURE : 1ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY-HSQC, TOCSY-HSQC, HCCH- REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX600 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA REMARK 210 METHOD USED : DYNAMICS ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: FIRST. N-15 EDITED TOCSY-HSQC, NOESY-HSQC, HNHA C-13 REMARK 210 EDITED HCCH-TOCSY, HCCH- NOESY, TRIPLE RESONANCE HNCA, REMARK 210 HBHA(CO)NH
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -18.9 DEGREES REMARK 500 1 ASP A 31 CB - CG - OD1 ANGL. DEV. = 13.6 DEGREES REMARK 500 1 GLU A 38 OE1 - CD - OE2 ANGL. DEV. = -7.7 DEGREES REMARK 500 2 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -20.4 DEGREES REMARK 500 2 ASP A 31 CB - CG - OD1 ANGL. DEV. = 16.0 DEGREES REMARK 500 2 GLU A 38 OE1 - CD - OE2 ANGL. DEV. = -19.8 DEGREES REMARK 500 2 GLU A 38 CG - CD - OE2 ANGL. DEV. = 14.4 DEGREES REMARK 500 3 ARG A 14 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 3 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -21.1 DEGREES REMARK 500 3 ASP A 31 CB - CG - OD1 ANGL. DEV. = 16.3 DEGREES REMARK 500 3 GLU A 38 OE1 - CD - OE2 ANGL. DEV. = -11.0 DEGREES REMARK 500 4 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -18.9 DEGREES REMARK 500 4 ASP A 31 CB - CG - OD1 ANGL. DEV. = 14.9 DEGREES REMARK 500 4 GLU A 38 OE1 - CD - OE2 ANGL. DEV. = -20.0 DEGREES REMARK 500 4 GLU A 38 CG - CD - OE2 ANGL. DEV. = 13.6 DEGREES REMARK 500 5 ASP A 27 CB - CG - OD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 5 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -19.2 DEGREES REMARK 500 5 ASP A 31 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 5 ASP A 31 CB - CG - OD2 ANGL. DEV. = 12.9 DEGREES REMARK 500 5 GLU A 38 OE1 - CD - OE2 ANGL. DEV. = -10.4 DEGREES REMARK 500 6 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -19.1 DEGREES REMARK 500 6 ASP A 31 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 6 ASP A 31 CB - CG - OD2 ANGL. DEV. = 13.0 DEGREES REMARK 500 6 GLU A 38 OE1 - CD - OE2 ANGL. DEV. = -12.7 DEGREES REMARK 500 7 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -19.6 DEGREES REMARK 500 7 ASP A 31 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 7 ASP A 31 CB - CG - OD2 ANGL. DEV. = 13.4 DEGREES REMARK 500 7 GLU A 38 OE1 - CD - OE2 ANGL. DEV. = -13.4 DEGREES REMARK 500 8 ARG A 23 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 8 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -21.4 DEGREES REMARK 500 8 ASP A 31 CB - CG - OD1 ANGL. DEV. = 17.1 DEGREES REMARK 500 8 GLU A 38 OE1 - CD - OE2 ANGL. DEV. = -9.7 DEGREES REMARK 500 9 ARG A 14 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 9 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -19.1 DEGREES REMARK 500 9 ASP A 31 CB - CG - OD1 ANGL. DEV. = 13.8 DEGREES REMARK 500 9 GLU A 38 OE1 - CD - OE2 ANGL. DEV. = -8.0 DEGREES REMARK 500 10 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -19.8 DEGREES REMARK 500 10 ASP A 31 CB - CG - OD1 ANGL. DEV. = 14.7 DEGREES REMARK 500 10 CYS A 32 CA - CB - SG ANGL. DEV. = 7.0 DEGREES REMARK 500 10 GLU A 38 OE1 - CD - OE2 ANGL. DEV. = -9.4 DEGREES REMARK 500 11 ARG A 25 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 11 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -21.4 DEGREES REMARK 500 11 ASP A 31 CB - CG - OD1 ANGL. DEV. = 17.1 DEGREES REMARK 500 11 GLU A 38 OE1 - CD - OE2 ANGL. DEV. = -10.6 DEGREES REMARK 500 12 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -18.4 DEGREES REMARK 500 12 ASP A 31 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 12 ASP A 31 CB - CG - OD2 ANGL. DEV. = 12.6 DEGREES REMARK 500 12 GLU A 38 OE1 - CD - OE2 ANGL. DEV. = -8.7 DEGREES REMARK 500 13 ASP A 31 OD1 - CG - OD2 ANGL. DEV. = -21.1 DEGREES REMARK 500 13 ASP A 31 CB - CG - OD1 ANGL. DEV. = 16.3 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 83 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 6 -73.24 -114.09 REMARK 500 1 THR A 8 104.21 -46.05 REMARK 500 1 ASP A 9 12.82 54.06 REMARK 500 1 ASP A 16 -42.66 -151.13 REMARK 500 1 CYS A 26 57.02 -170.49 REMARK 500 1 MET A 33 1.71 -55.23 REMARK 500 1 ASP A 34 -69.26 -139.91 REMARK 500 1 SER A 35 -16.49 163.11 REMARK 500 1 GLU A 38 -0.34 -149.55 REMARK 500 1 LYS A 39 10.88 -57.12 REMARK 500 1 SER A 40 20.46 -151.81 REMARK 500 2 HIS A 7 -163.84 -166.87 REMARK 500 2 THR A 8 47.21 -62.11 REMARK 500 2 ASP A 9 -0.73 123.73 REMARK 500 2 LEU A 15 -71.62 -113.09 REMARK 500 2 CYS A 26 79.43 -169.98 REMARK 500 2 ASP A 27 -48.78 -146.75 REMARK 500 2 ASP A 34 -105.06 -83.46 REMARK 500 2 SER A 35 6.96 -168.54 REMARK 500 2 LYS A 39 26.27 -61.57 REMARK 500 2 SER A 40 33.69 -160.60 REMARK 500 3 CYS A 6 -65.61 -125.89 REMARK 500 3 THR A 8 105.59 -48.24 REMARK 500 3 ASP A 9 11.20 53.32 REMARK 500 3 ARG A 23 -13.03 -46.98 REMARK 500 3 CYS A 26 70.50 -177.72 REMARK 500 3 ASP A 27 -36.06 -131.22 REMARK 500 3 MET A 33 -19.10 -49.47 REMARK 500 3 ASP A 34 -93.76 -100.83 REMARK 500 3 SER A 35 -0.59 -171.34 REMARK 500 3 GLU A 38 5.83 -151.54 REMARK 500 3 LYS A 39 19.12 -59.88 REMARK 500 3 SER A 40 20.54 -143.73 REMARK 500 4 CYS A 6 -71.86 -109.57 REMARK 500 4 THR A 8 101.32 -43.68 REMARK 500 4 ASP A 9 12.22 51.97 REMARK 500 4 ASP A 16 -72.33 -143.45 REMARK 500 4 ARG A 25 44.75 -83.37 REMARK 500 4 CYS A 26 22.15 -175.12 REMARK 500 4 MET A 33 12.91 -53.84 REMARK 500 4 ASP A 34 -99.86 -142.96 REMARK 500 4 SER A 35 -8.69 -172.32 REMARK 500 4 LYS A 39 2.50 -50.80 REMARK 500 4 SER A 40 10.41 -146.65 REMARK 500 4 CYS A 41 48.13 -88.92 REMARK 500 4 GLU A 42 77.45 48.19 REMARK 500 5 CYS A 6 -71.67 -124.49 REMARK 500 5 THR A 8 104.54 -48.20 REMARK 500 5 ASP A 9 14.21 52.74 REMARK 500 5 ARG A 23 -15.14 -48.34 REMARK 500 5 CYS A 26 62.29 -163.96 REMARK 500 5 ASP A 27 -44.43 -146.40 REMARK 500 5 MET A 33 -19.14 -45.94 REMARK 500 5 ASP A 34 -68.61 -130.60 REMARK 500 5 SER A 35 -12.42 -179.63 REMARK 500 5 GLU A 38 15.77 -156.40 REMARK 500 5 LYS A 39 16.16 -56.00 REMARK 500 5 SER A 40 20.82 -157.42 REMARK 500 5 GLU A 42 -154.79 61.86 REMARK 500 6 CYS A 6 -71.91 -131.12 REMARK 500 6 THR A 8 103.56 -49.07 REMARK 500 6 ASP A 9 14.57 54.33 REMARK 500 6 ASP A 16 -45.79 -145.04 REMARK 500 6 CYS A 26 44.17 120.95 REMARK 500 6 MET A 33 -2.85 -54.39 REMARK 500 6 ASP A 34 -74.54 -133.16 REMARK 500 6 SER A 35 3.19 160.31 REMARK 500 6 GLU A 38 20.50 -148.92 REMARK 500 6 LYS A 39 0.35 -55.33 REMARK 500 6 SER A 40 20.23 -144.80 REMARK 500 7 CYS A 6 -65.48 -94.62 REMARK 500 7 HIS A 7 -174.31 -170.83 REMARK 500 7 THR A 8 102.48 -52.70 REMARK 500 7 ASP A 9 14.41 53.63 REMARK 500 7 ARG A 23 -18.93 -40.12 REMARK 500 7 CYS A 26 68.17 166.47 REMARK 500 7 ASP A 27 -53.31 -137.26 REMARK 500 7 MET A 33 -9.51 -51.65 REMARK 500 7 ASP A 34 -89.93 -101.70 REMARK 500 7 SER A 35 -0.04 -179.16 REMARK 500 8 CYS A 6 -63.81 -123.47 REMARK 500 8 ASP A 9 0.65 56.19 REMARK 500 8 ASP A 16 -51.03 -127.69 REMARK 500 8 ARG A 23 -13.95 -47.56 REMARK 500 8 CYS A 26 83.79 -170.39 REMARK 500 8 ASP A 27 -46.14 -154.21 REMARK 500 8 MET A 33 11.22 -57.36 REMARK 500 8 ASP A 34 -87.25 -134.55 REMARK 500 8 SER A 35 2.45 -176.14 REMARK 500 8 LYS A 39 -1.53 -52.32 REMARK 500 9 THR A 8 104.14 -44.08 REMARK 500 9 ASP A 9 12.65 53.53 REMARK 500 9 ASP A 16 -57.09 -144.95 REMARK 500 9 ARG A 23 -15.30 -45.54 REMARK 500 9 CYS A 26 64.38 -174.81 REMARK 500 9 MET A 33 -4.92 -46.61 REMARK 500 9 ASP A 34 -71.32 -139.25 REMARK 500 9 SER A 35 -18.17 168.17 REMARK 500 9 LYS A 39 3.29 -50.13 REMARK 500 9 SER A 40 16.12 -145.77 REMARK 500 10 CYS A 6 -71.84 -108.44 REMARK 500 10 THR A 8 104.53 -48.15 REMARK 500 10 ASP A 9 14.54 53.24 REMARK 500 10 ARG A 23 -15.76 -44.58 REMARK 500 10 CYS A 26 10.88 132.84 REMARK 500 10 ASP A 34 -88.67 -102.06 REMARK 500 10 SER A 35 -3.76 -172.38 REMARK 500 10 LYS A 39 -9.69 -55.16 REMARK 500 11 CYS A 6 -76.31 -116.90 REMARK 500 11 THR A 8 105.39 -47.09 REMARK 500 11 ASP A 9 14.53 52.97 REMARK 500 11 CYS A 26 61.36 -166.47 REMARK 500 11 ASP A 27 -47.26 -145.75 REMARK 500 11 ASP A 34 -93.74 -99.12 REMARK 500 11 SER A 35 8.53 -171.05 REMARK 500 11 GLU A 38 12.67 -149.04 REMARK 500 11 LYS A 39 6.82 -50.34 REMARK 500 11 SER A 40 17.53 -151.54 REMARK 500 12 CYS A 6 -70.29 -101.52 REMARK 500 12 THR A 8 91.87 -55.76 REMARK 500 12 ASP A 9 13.82 54.34 REMARK 500 12 CYS A 26 71.35 -169.27 REMARK 500 12 ASP A 27 -43.13 -152.38 REMARK 500 12 MET A 33 6.19 -50.68 REMARK 500 12 ASP A 34 -57.40 -133.45 REMARK 500 12 SER A 35 -15.25 159.10 REMARK 500 12 GLU A 38 27.12 -159.01 REMARK 500 12 LYS A 39 7.18 -52.20 REMARK 500 12 SER A 40 17.85 -142.22 REMARK 500 12 GLU A 42 -152.14 59.67 REMARK 500 13 THR A 8 102.70 -44.95 REMARK 500 13 ASP A 9 14.05 53.90 REMARK 500 13 CYS A 26 18.43 -166.22 REMARK 500 13 ASP A 34 -94.04 -97.94 REMARK 500 13 SER A 35 1.67 -173.49 REMARK 500 13 GLU A 38 19.64 -153.16 REMARK 500 13 LYS A 39 6.99 -55.78 REMARK 500 13 SER A 40 19.01 -142.97 REMARK 500 13 CYS A 41 32.47 -141.16 REMARK 500 14 CYS A 6 -81.00 -121.39 REMARK 500 14 THR A 8 103.34 -47.10 REMARK 500 14 ASP A 9 13.77 53.95 REMARK 500 14 ASP A 16 -43.62 -149.82 REMARK 500 14 CYS A 26 76.52 178.98 REMARK 500 14 ASP A 27 -51.14 -154.31 REMARK 500 14 MET A 33 -3.24 -52.93 REMARK 500 14 ASP A 34 -75.38 -128.18 REMARK 500 14 SER A 35 6.36 174.04 REMARK 500 14 LYS A 39 15.54 -59.23 REMARK 500 14 SER A 40 22.01 -159.63 REMARK 500 15 HIS A 7 -178.73 179.76 REMARK 500 15 THR A 8 101.67 -52.99 REMARK 500 15 ASP A 9 15.64 53.29 REMARK 500 15 ASP A 16 -50.30 -136.65 REMARK 500 15 ARG A 23 -17.81 -42.10 REMARK 500 15 ARG A 25 36.47 -81.82 REMARK 500 15 CYS A 26 53.09 -175.69 REMARK 500 15 ASP A 27 -49.15 -134.66 REMARK 500 15 ASP A 34 -92.60 -117.82 REMARK 500 15 SER A 35 1.94 -172.94 REMARK 500 15 GLU A 38 22.23 -145.75 REMARK 500 15 LYS A 39 -3.81 -57.97 REMARK 500 15 GLU A 42 4.39 56.54 REMARK 500 16 CYS A 6 -80.63 -121.52 REMARK 500 16 THR A 8 103.76 -46.56 REMARK 500 16 ASP A 9 16.77 53.52 REMARK 500 16 ASP A 16 -29.47 -145.32 REMARK 500 16 CYS A 26 42.20 -158.99 REMARK 500 16 ASP A 27 -63.18 -134.93 REMARK 500 16 MET A 33 11.60 -53.38 REMARK 500 16 ASP A 34 -89.63 -139.34 REMARK 500 16 SER A 35 -4.45 -169.48 REMARK 500 16 LYS A 39 -3.31 -55.12 REMARK 500 16 SER A 40 49.44 -148.06 REMARK 500 16 CYS A 41 86.04 -166.49 REMARK 500 17 CYS A 6 -74.03 -119.45 REMARK 500 17 THR A 8 105.91 -38.26 REMARK 500 17 ASP A 9 3.35 55.30 REMARK 500 17 ARG A 23 -13.20 -45.00 REMARK 500 17 ARG A 25 24.56 -70.38 REMARK 500 17 CYS A 26 55.76 -177.63 REMARK 500 17 ASP A 34 -94.98 -100.25 REMARK 500 17 SER A 35 7.58 179.56 REMARK 500 18 THR A 8 104.50 -48.16 REMARK 500 18 ASP A 9 9.96 50.70 REMARK 500 18 ARG A 23 -17.36 -45.31 REMARK 500 18 CYS A 26 70.24 -165.40 REMARK 500 18 ASP A 27 -23.39 -142.42 REMARK 500 18 MET A 33 2.45 -60.91 REMARK 500 18 ASP A 34 -89.19 -136.96 REMARK 500 18 SER A 35 15.99 -178.85 REMARK 500 18 LYS A 39 -11.31 -46.31 REMARK 500 18 SER A 40 26.49 -147.04 REMARK 500 18 CYS A 41 35.47 -78.05 REMARK 500 19 CYS A 6 -78.32 -132.80 REMARK 500 19 THR A 8 104.38 -44.59 REMARK 500 19 ASP A 9 14.35 53.70 REMARK 500 19 ASP A 16 -64.86 -159.29 REMARK 500 19 ARG A 23 -18.55 -43.69 REMARK 500 19 ARG A 25 34.96 -81.23 REMARK 500 19 CYS A 26 10.53 -164.42 REMARK 500 19 MET A 33 6.64 -55.78 REMARK 500 19 ASP A 34 -82.93 -126.62 REMARK 500 19 SER A 35 5.83 -178.50 REMARK 500 19 LYS A 39 17.54 -56.44 REMARK 500 19 SER A 40 11.68 -157.24 REMARK 500 20 CYS A 6 -68.88 -134.60 REMARK 500 20 THR A 8 103.52 -44.74 REMARK 500 20 ASP A 9 15.10 53.84 REMARK 500 20 CYS A 26 10.39 -163.12 REMARK 500 20 MET A 33 9.42 -54.99 REMARK 500 20 ASP A 34 -90.63 -130.59 REMARK 500 20 SER A 35 -3.56 -172.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 29 THR A 30 1 -141.45 REMARK 500 ASP A 29 THR A 30 2 -140.82 REMARK 500 SER A 36 ASP A 37 2 139.50 REMARK 500 ASP A 37 GLU A 38 2 -146.43 REMARK 500 SER A 36 ASP A 37 3 146.10 REMARK 500 SER A 36 ASP A 37 4 142.30 REMARK 500 ASP A 31 CYS A 32 5 144.51 REMARK 500 TRP A 24 ARG A 25 6 148.17 REMARK 500 ASP A 31 CYS A 32 6 148.14 REMARK 500 LEU A 22 ARG A 23 7 148.25 REMARK 500 ASP A 31 CYS A 32 7 145.95 REMARK 500 SER A 36 ASP A 37 8 147.58 REMARK 500 ASP A 29 THR A 30 9 -146.24 REMARK 500 SER A 36 ASP A 37 9 149.58 REMARK 500 LEU A 22 ARG A 23 10 149.22 REMARK 500 ASP A 29 THR A 30 10 -140.73 REMARK 500 SER A 36 ASP A 37 11 149.23 REMARK 500 SER A 36 ASP A 37 12 144.40 REMARK 500 SER A 36 ASP A 37 13 146.25 REMARK 500 ASP A 31 CYS A 32 14 148.14 REMARK 500 SER A 36 ASP A 37 14 148.57 REMARK 500 GLY A 28 ASP A 29 15 149.50 REMARK 500 ASP A 29 THR A 30 15 -141.65 REMARK 500 SER A 36 ASP A 37 16 149.61 REMARK 500 ASP A 37 GLU A 38 17 -147.89 REMARK 500 GLU A 10 PHE A 11 18 -149.93 REMARK 500 ASP A 29 THR A 30 18 -128.16 REMARK 500 SER A 36 ASP A 37 18 139.01 REMARK 500 SER A 36 ASP A 37 19 147.96 REMARK 500 LEU A 22 ARG A 23 20 149.93 REMARK 500 SER A 36 ASP A 37 20 143.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 8 ARG A 23 0.08 SIDE_CHAIN REMARK 500 16 ARG A 25 0.11 SIDE_CHAIN REMARK 500 20 ARG A 23 0.09 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 CA A 45 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 27 OD2 REMARK 620 2 ASP A 29 O 64.0 REMARK 620 3 GLU A 38 OE2 88.7 62.4 REMARK 620 4 ASP A 31 OD1 101.2 104.7 158.4 REMARK 620 5 TRP A 24 O 89.8 139.9 89.0 110.0 REMARK 620 6 ASP A 37 OD2 167.9 119.9 83.9 89.0 80.6 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 45
DBREF 1CR8 A 3 44 UNP Q07954 LRP1_HUMAN 1059 1100
SEQRES 1 A 42 PRO GLY GLY CYS HIS THR ASP GLU PHE GLN CYS ARG LEU SEQRES 2 A 42 ASP GLY LEU CYS ILE PRO LEU ARG TRP ARG CYS ASP GLY SEQRES 3 A 42 ASP THR ASP CYS MET ASP SER SER ASP GLU LYS SER CYS SEQRES 4 A 42 GLU GLY VAL
HET CA A 45 1
HETNAM CA CALCIUM ION
FORMUL 2 CA CA 2+
HELIX 1 H1 LEU A 22 ARG A 25 1 4
SHEET 1 S1 1 PHE A 11 CYS A 13 0 SHEET 1 S2 1 LEU A 18 ILE A 20 0
SSBOND 1 CYS A 6 CYS A 19 1555 1555 2.03 SSBOND 2 CYS A 13 CYS A 32 1555 1555 2.01 SSBOND 3 CYS A 26 CYS A 41 1555 1555 2.05
LINK CA CA A 45 OD2 ASP A 27 1555 1555 2.40 LINK CA CA A 45 O ASP A 29 1555 1555 2.38 LINK CA CA A 45 OE2 GLU A 38 1555 1555 2.39 LINK CA CA A 45 OD1 ASP A 31 1555 1555 2.41 LINK CA CA A 45 O TRP A 24 1555 1555 2.38 LINK CA CA A 45 OD2 ASP A 37 1555 1555 2.40
SITE 1 AC1 6 TRP A 24 ASP A 27 ASP A 29 ASP A 31 SITE 2 AC1 6 ASP A 37 GLU A 38
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000