10 20 30 40 50 60 70 80 1CLB - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER CALCIUM-BINDING PROTEIN 08-FEB-95 1CLB
TITLE DETERMINATION OF THE SOLUTION STRUCTURE OF APO CALBINDIN TITLE 2 D9K BY NMR SPECTROSCOPY
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALBINDIN D9K; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 GENE: ICABP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PICB1
KEYWDS EF-HAND, CALCIUM-BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 33
AUTHOR N.J.SKELTON,W.J.CHAZIN
REVDAT 3 24-FEB-09 1CLB 1 VERSN REVDAT 2 15-MAY-95 1CLB 1 KEYWDS REVDAT 1 20-APR-95 1CLB 0
JRNL AUTH N.J.SKELTON,J.KORDEL,W.J.CHAZIN JRNL TITL DETERMINATION OF THE SOLUTION STRUCTURE OF APO JRNL TITL 2 CALBINDIN D9K BY NMR SPECTROSCOPY. JRNL REF J.MOL.BIOL. V. 249 441 1995 JRNL REFN ISSN 0022-2836 JRNL PMID 7783203 JRNL DOI 10.1006/JMBI.1995.0308
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH N.J.SKELTON,J.KOERDEL,W.J.CHAZIN REMARK 1 TITL SIGNAL TRANSDUCTION VERSUS BUFFERING ACTIVITY IN REMARK 1 TITL 2 CA2+-BINDING PROTEINS REMARK 1 REF NAT.STRUCT.BIOL. V. 1 239 1994 REMARK 1 REFN ISSN 1072-8368 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.KOERDEL,N.J.SKELTON,M.AKKE,W.J.CHAZIN REMARK 1 TITL HIGH RESOLUTION SOLUTION STRUCTURE OF REMARK 1 TITL 2 CALCIUM-LOADED CALBINDIN D9K REMARK 1 REF J.MOL.BIOL. V. 231 711 1993 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 3 REMARK 1 AUTH N.J.SKELTON,S.FORSEN,W.J.CHAZIN REMARK 1 TITL 1H NMR RESONANCE ASSIGNMENTS, SECONDARY STRUCTURE REMARK 1 TITL 2 AND GLOBAL FOLD OF APO CALBINDIN D9K REMARK 1 REF BIOCHEMISTRY V. 29 5752 1990 REMARK 1 REFN ISSN 0006-2960
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DISGEO, AMBER REMARK 3 AUTHORS : HAVEL,WUTHRICH (DISGEO), PEARLMAN,CASE, REMARK 3 CALDWELL,SEIBEL,SINGH,WEINER,KOLLMAN (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1CLB COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 33 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-33 REMARK 465 RES C SSSEQI REMARK 465 MET A 0
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 16 -105.99 -104.14 REMARK 500 1 LEU A 40 64.59 -69.90 REMARK 500 1 SER A 44 43.40 -81.84 REMARK 500 1 THR A 45 -177.37 152.97 REMARK 500 1 ASN A 56 -66.60 -170.45 REMARK 500 2 LYS A 16 -96.06 -119.46 REMARK 500 2 LEU A 40 -74.09 63.34 REMARK 500 2 THR A 45 -170.70 167.13 REMARK 500 2 ASN A 56 -32.29 178.28 REMARK 500 3 SER A 44 43.09 -82.38 REMARK 500 3 THR A 45 149.09 170.01 REMARK 500 3 LYS A 55 75.69 -69.75 REMARK 500 3 ASN A 56 -34.69 173.43 REMARK 500 4 THR A 45 -166.62 172.88 REMARK 500 4 LEU A 46 -16.11 -160.52 REMARK 500 5 LEU A 40 49.62 -76.85 REMARK 500 5 SER A 44 43.20 -82.97 REMARK 500 6 PRO A 20 0.88 -69.94 REMARK 500 6 PHE A 36 57.46 -119.69 REMARK 500 6 LEU A 40 148.34 79.31 REMARK 500 6 LYS A 41 74.38 -67.70 REMARK 500 7 SER A 2 -70.28 -179.39 REMARK 500 7 GLU A 17 -147.38 -119.58 REMARK 500 7 LEU A 39 -67.77 -95.81 REMARK 500 7 LEU A 40 -74.78 56.51 REMARK 500 7 THR A 45 171.14 173.65 REMARK 500 7 LYS A 55 48.68 -77.85 REMARK 500 7 ASN A 56 -75.13 -167.08 REMARK 500 7 ASP A 58 54.50 35.79 REMARK 500 8 LYS A 16 -48.88 -160.32 REMARK 500 8 THR A 45 142.19 70.65 REMARK 500 9 LYS A 41 43.41 -80.70 REMARK 500 9 SER A 44 32.63 -85.64 REMARK 500 9 THR A 45 146.15 77.14 REMARK 500 9 ASN A 56 -37.50 -177.42 REMARK 500 10 PRO A 20 -9.57 -57.65 REMARK 500 10 LEU A 40 32.87 36.69 REMARK 500 10 SER A 44 42.66 -81.78 REMARK 500 10 THR A 45 127.36 64.30 REMARK 500 10 ASP A 58 58.00 39.98 REMARK 500 11 LYS A 41 80.53 -66.24 REMARK 500 11 SER A 44 37.11 -83.94 REMARK 500 11 THR A 45 -177.87 176.27 REMARK 500 11 LEU A 46 -16.88 -163.74 REMARK 500 11 ASN A 56 -40.35 -150.67 REMARK 500 12 LYS A 16 -84.75 -93.29 REMARK 500 12 SER A 44 45.10 -81.80 REMARK 500 12 THR A 45 141.89 68.52 REMARK 500 12 ASP A 54 70.64 -68.78 REMARK 500 13 SER A 44 35.79 -80.89 REMARK 500 13 GLU A 48 -65.56 64.18 REMARK 500 13 ASN A 56 -40.23 -177.83 REMARK 500 14 GLU A 17 -155.64 -134.48 REMARK 500 14 LEU A 40 5.40 -68.91 REMARK 500 14 LYS A 41 87.67 -61.40 REMARK 500 14 THR A 45 123.20 61.39 REMARK 500 14 LYS A 55 -53.95 -122.51 REMARK 500 14 ASP A 58 61.77 38.64 REMARK 500 15 SER A 2 -81.23 177.80 REMARK 500 15 ALA A 15 -60.49 69.41 REMARK 500 15 LYS A 16 -27.20 -167.36 REMARK 500 15 LYS A 55 -106.01 -122.31 REMARK 500 16 SER A 2 -63.75 -178.91 REMARK 500 16 GLU A 17 179.92 72.00 REMARK 500 16 PRO A 20 95.83 -54.42 REMARK 500 16 ASN A 21 19.10 110.64 REMARK 500 16 SER A 44 41.45 -81.43 REMARK 500 16 THR A 45 136.82 70.28 REMARK 500 16 ASP A 54 75.36 -65.74 REMARK 500 16 ASN A 56 -51.06 76.97 REMARK 500 17 LYS A 16 -60.30 -133.42 REMARK 500 17 LEU A 40 99.49 -68.52 REMARK 500 17 LYS A 41 77.48 -64.86 REMARK 500 17 SER A 44 33.10 -80.52 REMARK 500 17 LYS A 55 43.58 33.65 REMARK 500 17 ASN A 56 -28.53 -144.37 REMARK 500 17 SER A 74 35.20 -166.55 REMARK 500 18 SER A 44 45.56 -81.33 REMARK 500 18 LEU A 46 -19.97 -148.56 REMARK 500 18 ASN A 56 26.38 -154.11 REMARK 500 18 ASP A 58 54.88 37.74 REMARK 500 19 ASP A 19 115.54 -164.78 REMARK 500 19 THR A 45 -178.84 168.56 REMARK 500 19 LEU A 46 -14.41 -168.64 REMARK 500 19 LEU A 53 -90.21 -75.28 REMARK 500 19 ASP A 54 49.56 -108.49 REMARK 500 20 LYS A 16 -63.38 -146.99 REMARK 500 20 LYS A 41 79.62 -64.54 REMARK 500 20 SER A 44 44.83 -83.45 REMARK 500 20 LEU A 46 -19.41 -159.03 REMARK 500 20 LYS A 55 72.06 -69.34 REMARK 500 20 ASN A 56 -47.52 174.64 REMARK 500 21 LYS A 16 -106.19 -100.68 REMARK 500 21 THR A 45 -173.78 -170.71 REMARK 500 21 LEU A 46 -18.14 166.29 REMARK 500 21 LYS A 55 6.26 59.16 REMARK 500 21 ASN A 56 -6.31 62.37 REMARK 500 21 ASP A 58 -47.69 -154.22 REMARK 500 22 GLU A 17 -134.51 48.30 REMARK 500 22 SER A 44 19.11 57.47 REMARK 500 22 LEU A 46 -18.15 -154.99 REMARK 500 22 ASP A 58 -42.01 72.39 REMARK 500 23 LYS A 41 82.60 -63.67 REMARK 500 23 ASP A 54 -71.02 -68.02 REMARK 500 23 LYS A 55 -68.06 60.41 REMARK 500 23 ASP A 58 -64.66 -173.52 REMARK 500 24 GLU A 17 -136.85 56.84 REMARK 500 24 THR A 45 173.63 173.33 REMARK 500 25 LYS A 16 -60.82 -134.43 REMARK 500 25 LEU A 40 48.56 -72.45 REMARK 500 25 SER A 44 41.00 -83.34 REMARK 500 25 THR A 45 142.64 63.93 REMARK 500 25 LYS A 55 -37.06 -34.99 REMARK 500 25 GLU A 60 -163.64 40.69 REMARK 500 26 ALA A 15 -97.30 50.88 REMARK 500 26 LYS A 16 45.16 -152.15 REMARK 500 26 LEU A 40 38.66 -74.11 REMARK 500 26 LYS A 41 79.81 -66.57 REMARK 500 26 SER A 44 38.62 -84.31 REMARK 500 26 THR A 45 159.43 175.26 REMARK 500 26 LEU A 46 -14.52 -142.21 REMARK 500 26 ASP A 58 -59.92 156.03 REMARK 500 27 SER A 2 -97.83 40.72 REMARK 500 27 LEU A 40 48.76 -83.23 REMARK 500 27 SER A 44 47.70 -83.60 REMARK 500 27 THR A 45 178.20 173.54 REMARK 500 27 LEU A 46 -21.18 -170.34 REMARK 500 27 SER A 74 22.22 -77.15 REMARK 500 28 SER A 2 -99.13 25.17 REMARK 500 28 SER A 44 45.45 -82.73 REMARK 500 28 ASP A 58 40.23 -171.52 REMARK 500 29 ALA A 15 -62.63 69.53 REMARK 500 29 LYS A 16 -51.44 -169.62 REMARK 500 29 ASP A 19 131.21 63.67 REMARK 500 29 SER A 44 42.65 -81.36 REMARK 500 29 THR A 45 133.83 67.85 REMARK 500 29 ASP A 54 -72.68 -60.31 REMARK 500 29 LYS A 55 51.49 31.37 REMARK 500 29 ASN A 56 -27.81 -145.03 REMARK 500 30 LYS A 16 -51.45 -143.20 REMARK 500 30 LYS A 41 -128.63 51.52 REMARK 500 30 LEU A 46 19.49 -143.08 REMARK 500 30 SER A 74 69.31 -171.64 REMARK 500 31 LYS A 41 77.05 -66.43 REMARK 500 31 THR A 45 -134.27 -161.60 REMARK 500 31 LEU A 46 -17.43 105.92 REMARK 500 32 GLU A 17 -133.64 61.33 REMARK 500 32 THR A 45 154.85 179.35 REMARK 500 32 LYS A 55 38.44 74.20 REMARK 500 32 ASN A 56 -61.11 170.04 REMARK 500 33 GLU A 17 -134.25 47.87 REMARK 500 33 ASP A 19 113.30 -170.72 REMARK 500 33 PRO A 20 1.13 -67.18 REMARK 500 33 LEU A 46 -16.54 -141.46 REMARK 500 33 SER A 74 -82.94 26.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 PHE A 50 0.10 SIDE_CHAIN REMARK 500 2 TYR A 13 0.09 SIDE_CHAIN REMARK 500 2 PHE A 50 0.11 SIDE_CHAIN REMARK 500 3 PHE A 50 0.09 SIDE_CHAIN REMARK 500 4 TYR A 13 0.14 SIDE_CHAIN REMARK 500 4 PHE A 50 0.11 SIDE_CHAIN REMARK 500 4 PHE A 63 0.07 SIDE_CHAIN REMARK 500 5 PHE A 50 0.13 SIDE_CHAIN REMARK 500 7 TYR A 13 0.07 SIDE_CHAIN REMARK 500 7 PHE A 50 0.11 SIDE_CHAIN REMARK 500 7 PHE A 63 0.08 SIDE_CHAIN REMARK 500 10 TYR A 13 0.09 SIDE_CHAIN REMARK 500 10 PHE A 50 0.10 SIDE_CHAIN REMARK 500 11 TYR A 13 0.08 SIDE_CHAIN REMARK 500 11 PHE A 50 0.11 SIDE_CHAIN REMARK 500 12 PHE A 50 0.14 SIDE_CHAIN REMARK 500 13 TYR A 13 0.10 SIDE_CHAIN REMARK 500 15 PHE A 50 0.14 SIDE_CHAIN REMARK 500 16 PHE A 50 0.16 SIDE_CHAIN REMARK 500 17 PHE A 50 0.10 SIDE_CHAIN REMARK 500 18 PHE A 50 0.08 SIDE_CHAIN REMARK 500 18 PHE A 63 0.08 SIDE_CHAIN REMARK 500 19 PHE A 50 0.08 SIDE_CHAIN REMARK 500 20 PHE A 50 0.10 SIDE_CHAIN REMARK 500 20 PHE A 63 0.08 SIDE_CHAIN REMARK 500 21 TYR A 13 0.08 SIDE_CHAIN REMARK 500 21 PHE A 63 0.08 SIDE_CHAIN REMARK 500 22 PHE A 50 0.10 SIDE_CHAIN REMARK 500 23 PHE A 50 0.16 SIDE_CHAIN REMARK 500 23 PHE A 63 0.08 SIDE_CHAIN REMARK 500 24 TYR A 13 0.10 SIDE_CHAIN REMARK 500 24 PHE A 50 0.15 SIDE_CHAIN REMARK 500 25 PHE A 50 0.14 SIDE_CHAIN REMARK 500 25 PHE A 63 0.09 SIDE_CHAIN REMARK 500 26 TYR A 13 0.10 SIDE_CHAIN REMARK 500 27 TYR A 13 0.10 SIDE_CHAIN REMARK 500 27 PHE A 50 0.08 SIDE_CHAIN REMARK 500 27 PHE A 63 0.09 SIDE_CHAIN REMARK 500 28 TYR A 13 0.07 SIDE_CHAIN REMARK 500 28 PHE A 63 0.09 SIDE_CHAIN REMARK 500 29 PHE A 50 0.09 SIDE_CHAIN REMARK 500 29 PHE A 63 0.08 SIDE_CHAIN REMARK 500 30 PHE A 50 0.09 SIDE_CHAIN REMARK 500 30 PHE A 63 0.08 SIDE_CHAIN REMARK 500 31 TYR A 13 0.09 SIDE_CHAIN REMARK 500 31 PHE A 36 0.07 SIDE_CHAIN REMARK 500 31 PHE A 50 0.11 SIDE_CHAIN REMARK 500 32 PHE A 50 0.09 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: LOA REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 SITE_IDENTIFIER: LOB REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL
DBREF 1CLB A 1 75 UNP P02633 S100G_BOVIN 4 78
SEQADV 1CLB GLY A 43 UNP P02633 PRO 46 CONFLICT
SEQRES 1 A 76 MET LYS SER PRO GLU GLU LEU LYS GLY ILE PHE GLU LYS SEQRES 2 A 76 TYR ALA ALA LYS GLU GLY ASP PRO ASN GLN LEU SER LYS SEQRES 3 A 76 GLU GLU LEU LYS LEU LEU LEU GLN THR GLU PHE PRO SER SEQRES 4 A 76 LEU LEU LYS GLY GLY SER THR LEU ASP GLU LEU PHE GLU SEQRES 5 A 76 GLU LEU ASP LYS ASN GLY ASP GLY GLU VAL SER PHE GLU SEQRES 6 A 76 GLU PHE GLN VAL LEU VAL LYS LYS ILE SER GLN
HELIX 1 1 PRO A 3 ALA A 14 1 12 HELIX 2 2 LYS A 25 GLU A 35 1 11 HELIX 3 3 PRO A 37 LEU A 39 5 3 HELIX 4 4 ASP A 47 LEU A 53 1 7 HELIX 5 5 PHE A 63 ILE A 73 1 11
SHEET 1 A 2 GLN A 22 SER A 24 0 SHEET 2 A 2 GLU A 60 SER A 62 -1 N VAL A 61 O LEU A 23
SITE 1 LOA 14 ALA A 14 ALA A 15 LYS A 16 GLU A 17 SITE 2 LOA 14 GLY A 18 ASP A 19 PRO A 20 ASN A 21 SITE 3 LOA 14 GLN A 22 LEU A 23 SER A 24 LYS A 25 SITE 4 LOA 14 GLU A 26 GLU A 27 SITE 1 LOB 12 ASP A 54 LYS A 55 ASN A 56 GLY A 57 SITE 2 LOB 12 ASP A 58 GLY A 59 GLU A 60 VAL A 61 SITE 3 LOB 12 SER A 62 PHE A 63 GLU A 64 GLU A 65
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000