10 20 30 40 50 60 70 80 1CGF - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE (METALLOPROTEASE) 03-FEB-94 1CGF
TITLE CRYSTAL STRUCTURES OF RECOMBINANT 19-KDA HUMAN FIBROBLAST TITLE 2 COLLAGENASE COMPLEXED TO ITSELF
COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBROBLAST COLLAGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.4.24.7; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CDNA
KEYWDS HYDROLASE (METALLOPROTEASE)
EXPDTA X-RAY DIFFRACTION
AUTHOR B.LOVEJOY,A.M.HASSELL,M.A.LUTHER,D.WEIGL,S.R.JORDAN
REVDAT 2 24-FEB-09 1CGF 1 VERSN REVDAT 1 31-MAR-95 1CGF 0
JRNL AUTH B.LOVEJOY,A.M.HASSELL,M.A.LUTHER,D.WEIGL,S.R.JORDAN JRNL TITL CRYSTAL STRUCTURES OF RECOMBINANT 19-KDA HUMAN JRNL TITL 2 FIBROBLAST COLLAGENASE COMPLEXED TO ITSELF. JRNL REF BIOCHEMISTRY V. 33 8207 1994 JRNL REFN ISSN 0006-2960 JRNL PMID 8031754 JRNL DOI 10.1021/BI00193A006
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH B.LOVEJOY,A.CLEASBY,A.M.HASSELL,K.LONGLEY, REMARK 1 AUTH 2 M.A.LUTHER,D.WEIGL,G.MCGEEHAN,A.B.MCELROY,D.DREWRY, REMARK 1 AUTH 3 M.H.LAMBERT,S.R.JORDAN REMARK 1 TITL STRUCTURE OF THE CATALYTIC DOMAIN OF FIBROBLAST REMARK 1 TITL 2 COLLAGENASE COMPLEXED WITH AN INHIBITOR REMARK 1 REF SCIENCE V. 263 375 1994 REMARK 1 REFN ISSN 0036-8075
REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 7.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 17088 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3094 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 543 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 2.06 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1CGF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.25000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 156 CG CD OE1 NE2 REMARK 470 ARG A 169 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 156 CG CD OE1 NE2 REMARK 470 ARG B 169 CG CD NE CZ NH1 NH2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 136 O HOH A 357 2848 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 125 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 ASP B 170 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 169 -45.99 82.54 REMARK 500 ASP A 170 -164.89 -67.45 REMARK 500 TYR A 210 69.52 86.48 REMARK 500 PHE A 242 133.31 -171.48 REMARK 500 GLN B 156 105.70 -56.21 REMARK 500 HIS B 168 54.00 -153.63 REMARK 500 ASN B 206 -156.98 -135.16 REMARK 500 TYR B 210 73.10 66.52 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 333 DISTANCE = 5.36 ANGSTROMS REMARK 525 HOH B 336 DISTANCE = 5.54 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 218 NE2 REMARK 620 2 HIS A 222 NE2 101.6 REMARK 620 3 HIS A 228 NE2 93.4 99.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 168 NE2 REMARK 620 2 ASP A 170 OD2 88.8 REMARK 620 3 HIS A 183 NE2 122.5 112.6 REMARK 620 4 HIS A 196 ND1 115.9 97.5 113.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 175 OD1 REMARK 620 2 GLY A 176 O 80.6 REMARK 620 3 GLY A 178 O 85.2 96.6 REMARK 620 4 ASN A 180 O 96.7 174.2 78.0 REMARK 620 5 GLU A 201 OE2 159.0 80.9 87.0 100.7 REMARK 620 6 ASP A 198 OD2 101.2 83.4 173.5 102.2 86.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 199 O REMARK 620 2 GLU A 201 O 74.3 REMARK 620 3 ASP A 124 OD1 154.2 127.1 REMARK 620 4 ASP A 124 OD2 136.6 74.3 54.4 REMARK 620 5 GLU A 199 OE2 73.8 122.0 81.6 98.8 REMARK 620 6 HOH A 343 O 113.7 69.9 89.4 82.2 168.0 REMARK 620 7 HOH A 354 O 92.0 141.7 78.5 130.8 86.2 84.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 310 O REMARK 620 2 GLY A 190 O 72.0 REMARK 620 3 HOH A 319 O 96.6 76.0 REMARK 620 4 ASP A 194 OD1 87.2 107.0 175.8 REMARK 620 5 ASP A 158 O 98.2 154.7 82.2 95.5 REMARK 620 6 GLY A 192 O 156.2 85.8 86.1 91.1 105.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 222 NE2 REMARK 620 2 HIS B 228 NE2 94.6 REMARK 620 3 HIS B 218 NE2 96.2 108.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 170 OD2 REMARK 620 2 HIS B 168 NE2 113.0 REMARK 620 3 HIS B 196 ND1 111.7 100.4 REMARK 620 4 HIS B 183 NE2 112.5 115.7 102.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 180 O REMARK 620 2 ASP B 175 OD1 84.4 REMARK 620 3 ASP B 198 OD2 90.5 96.9 REMARK 620 4 GLU B 201 OE2 94.0 171.3 91.6 REMARK 620 5 GLY B 176 O 169.9 85.5 91.7 95.8 REMARK 620 6 GLY B 178 O 93.5 85.3 175.6 86.3 84.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 124 OD2 REMARK 620 2 GLU B 201 O 79.5 REMARK 620 3 HOH B 340 O 92.8 74.1 REMARK 620 4 GLU B 199 O 140.6 74.2 107.1 REMARK 620 5 GLU B 199 OE2 94.2 120.4 164.9 75.2 REMARK 620 6 HOH B 341 O 147.9 128.0 81.6 70.2 85.4 REMARK 620 7 ASP B 124 OD1 53.6 125.6 81.7 160.2 91.7 94.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 190 O REMARK 620 2 GLY B 192 O 86.1 REMARK 620 3 ASP B 194 OD1 91.1 85.9 REMARK 620 4 HOH B 310 O 104.0 82.5 160.2 REMARK 620 5 HOH B 377 O 91.0 173.4 100.1 92.5 REMARK 620 6 ASP B 158 O 171.3 102.6 90.6 76.4 80.3 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CTA REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 SITE_IDENTIFIER: CTB REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 301 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 302 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 303 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 304 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 305 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 301 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 302 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 303 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 304 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 305
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1CGL RELATED DB: PDB REMARK 900 RELATED ID: 1CGE RELATED DB: PDB
REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE WAS DERIVED FROM THE CDNA SEQUENCE OF REMARK 999 G. I. GOLDBERG, ET AL., J. BIOL. CHEM. 261: 6600-660 REMARK 999 (1986), AND DESCRIBED IN THE JRNL REFERENCE ABOVE. REMARK 999 REMARK 999 N-TERMINAL MASS SPECTROMETRY ANALYSIS OF DISSOLVED CRYSTALS REMARK 999 CONFIRMED THAT LEU 102 REPRESENTS THE AMINO TERMINUS.
DBREF 1CGF A 102 263 UNP P03956 MMP1_HUMAN 102 263 DBREF 1CGF B 102 263 UNP P03956 MMP1_HUMAN 102 263
SEQRES 1 A 162 LEU THR GLU GLY ASN PRO ARG TRP GLU GLN THR HIS LEU SEQRES 2 A 162 ARG TYR ARG ILE GLU ASN TYR THR PRO ASP LEU PRO ARG SEQRES 3 A 162 ALA ASP VAL ASP HIS ALA ILE GLU LYS ALA PHE GLN LEU SEQRES 4 A 162 TRP SER ASN VAL THR PRO LEU THR PHE THR LYS VAL SER SEQRES 5 A 162 GLU GLY GLN ALA ASP ILE MET ILE SER PHE VAL ARG GLY SEQRES 6 A 162 ASP HIS ARG ASP ASN SER PRO PHE ASP GLY PRO GLY GLY SEQRES 7 A 162 ASN LEU ALA HIS ALA PHE GLN PRO GLY PRO GLY ILE GLY SEQRES 8 A 162 GLY ASP ALA HIS PHE ASP GLU ASP GLU ARG TRP THR ASN SEQRES 9 A 162 ASN PHE ARG GLU TYR ASN LEU HIS ARG VAL ALA ALA HIS SEQRES 10 A 162 GLU LEU GLY HIS SER LEU GLY LEU SER HIS SER THR ASP SEQRES 11 A 162 ILE GLY ALA LEU MET TYR PRO SER TYR THR PHE SER GLY SEQRES 12 A 162 ASP VAL GLN LEU ALA GLN ASP ASP ILE ASP GLY ILE GLN SEQRES 13 A 162 ALA ILE TYR GLY ARG SER SEQRES 1 B 162 LEU THR GLU GLY ASN PRO ARG TRP GLU GLN THR HIS LEU SEQRES 2 B 162 ARG TYR ARG ILE GLU ASN TYR THR PRO ASP LEU PRO ARG SEQRES 3 B 162 ALA ASP VAL ASP HIS ALA ILE GLU LYS ALA PHE GLN LEU SEQRES 4 B 162 TRP SER ASN VAL THR PRO LEU THR PHE THR LYS VAL SER SEQRES 5 B 162 GLU GLY GLN ALA ASP ILE MET ILE SER PHE VAL ARG GLY SEQRES 6 B 162 ASP HIS ARG ASP ASN SER PRO PHE ASP GLY PRO GLY GLY SEQRES 7 B 162 ASN LEU ALA HIS ALA PHE GLN PRO GLY PRO GLY ILE GLY SEQRES 8 B 162 GLY ASP ALA HIS PHE ASP GLU ASP GLU ARG TRP THR ASN SEQRES 9 B 162 ASN PHE ARG GLU TYR ASN LEU HIS ARG VAL ALA ALA HIS SEQRES 10 B 162 GLU LEU GLY HIS SER LEU GLY LEU SER HIS SER THR ASP SEQRES 11 B 162 ILE GLY ALA LEU MET TYR PRO SER TYR THR PHE SER GLY SEQRES 12 B 162 ASP VAL GLN LEU ALA GLN ASP ASP ILE ASP GLY ILE GLN SEQRES 13 B 162 ALA ILE TYR GLY ARG SER
HET ZN A 301 1 HET ZN A 302 1 HET CA A 303 1 HET CA A 304 1 HET CA A 305 1 HET ZN B 301 1 HET ZN B 302 1 HET CA B 303 1 HET CA B 304 1 HET CA B 305 1
HETNAM ZN ZINC ION HETNAM CA CALCIUM ION
FORMUL 3 ZN 4(ZN 2+) FORMUL 5 CA 6(CA 2+) FORMUL 13 HOH *181(H2 O)
HELIX 1 A1 ASP A 129 VAL A 144 1 16 HELIX 2 B1 LEU A 212 SER A 223 1 12 HELIX 3 C1 GLN A 250 TYR A 260 1 11 HELIX 4 A2 ASP B 129 VAL B 144 1 16 HELIX 5 B2 LEU B 212 SER B 223 1 12 HELIX 6 C2 GLN B 250 TYR B 260 1 11
SHEET 1 A 5 LEU A 147 SER A 153 0 SHEET 2 A 5 HIS A 113 ILE A 118 1 N TYR A 116 O THR A 150 SHEET 3 A 5 ASP A 158 VAL A 164 1 N ILE A 161 O ARG A 117 SHEET 4 A 5 ASP A 194 GLU A 199 1 N ALA A 195 O MET A 160 SHEET 5 A 5 ALA A 182 PHE A 185 -1 O HIS A 183 N HIS A 196 SHEET 1 B 5 LEU B 147 SER B 153 0 SHEET 2 B 5 HIS B 113 ILE B 118 1 N TYR B 116 O THR B 150 SHEET 3 B 5 ASP B 158 VAL B 164 1 N ILE B 161 O ARG B 117 SHEET 4 B 5 ASP B 194 GLU B 199 1 N ALA B 195 O MET B 160 SHEET 5 B 5 ALA B 182 PHE B 185 -1 O HIS B 183 N HIS B 196
LINK ZN ZN A 301 NE2 HIS A 218 1555 1555 2.16 LINK ZN ZN A 301 NE2 HIS A 222 1555 1555 2.19 LINK ZN ZN A 301 NE2 HIS A 228 1555 1555 2.11 LINK ZN ZN A 302 NE2 HIS A 168 1555 1555 2.06 LINK ZN ZN A 302 OD2 ASP A 170 1555 1555 2.13 LINK ZN ZN A 302 NE2 HIS A 183 1555 1555 2.08 LINK ZN ZN A 302 ND1 HIS A 196 1555 1555 2.07 LINK CA CA A 303 OD1 ASP A 175 1555 1555 2.34 LINK CA CA A 303 O GLY A 176 1555 1555 2.26 LINK CA CA A 303 O GLY A 178 1555 1555 2.23 LINK CA CA A 303 O ASN A 180 1555 1555 2.23 LINK CA CA A 303 OE2 GLU A 201 1555 1555 2.35 LINK CA CA A 303 OD2 ASP A 198 1555 1555 2.28 LINK CA CA A 304 O GLU A 199 1555 1555 2.23 LINK CA CA A 304 O GLU A 201 1555 1555 2.53 LINK CA CA A 304 OD1 ASP A 124 1555 1555 2.46 LINK CA CA A 304 OD2 ASP A 124 1555 1555 2.32 LINK CA CA A 304 OE2 GLU A 199 1555 1555 2.33 LINK CA CA A 304 O HOH A 343 1555 1555 2.44 LINK CA CA A 304 O HOH A 354 1555 1555 2.33 LINK CA CA A 305 O HOH A 310 1555 1555 2.34 LINK CA CA A 305 O GLY A 190 1555 1555 2.60 LINK CA CA A 305 O HOH A 319 1555 1555 2.17 LINK CA CA A 305 OD1 ASP A 194 1555 1555 2.47 LINK CA CA A 305 O ASP A 158 1555 1555 2.26 LINK CA CA A 305 O GLY A 192 1555 1555 2.26 LINK ZN ZN B 301 NE2 HIS B 222 1555 1555 2.13 LINK ZN ZN B 301 NE2 HIS B 228 1555 1555 2.08 LINK ZN ZN B 301 NE2 HIS B 218 1555 1555 2.04 LINK ZN ZN B 302 OD2 ASP B 170 1555 1555 2.06 LINK ZN ZN B 302 NE2 HIS B 168 1555 1555 2.17 LINK ZN ZN B 302 ND1 HIS B 196 1555 1555 2.02 LINK ZN ZN B 302 NE2 HIS B 183 1555 1555 2.13 LINK CA CA B 303 O ASN B 180 1555 1555 2.40 LINK CA CA B 303 OD1 ASP B 175 1555 1555 2.32 LINK CA CA B 303 OD2 ASP B 198 1555 1555 2.24 LINK CA CA B 303 OE2 GLU B 201 1555 1555 2.27 LINK CA CA B 303 O GLY B 176 1555 1555 2.34 LINK CA CA B 303 O GLY B 178 1555 1555 2.31 LINK CA CA B 304 OD2 ASP B 124 1555 1555 2.32 LINK CA CA B 304 O GLU B 201 1555 1555 2.45 LINK CA CA B 304 O HOH B 340 1555 1555 2.29 LINK CA CA B 304 O GLU B 199 1555 1555 2.35 LINK CA CA B 304 OE2 GLU B 199 1555 1555 2.31 LINK CA CA B 304 O HOH B 341 1555 1555 2.45 LINK CA CA B 304 OD1 ASP B 124 1555 1555 2.44 LINK CA CA B 305 O GLY B 190 1555 1555 2.37 LINK CA CA B 305 O GLY B 192 1555 1555 2.41 LINK CA CA B 305 OD1 ASP B 194 1555 1555 2.41 LINK CA CA B 305 O HOH B 310 1555 1555 2.24 LINK CA CA B 305 O HOH B 377 1555 1555 2.26 LINK CA CA B 305 O ASP B 158 1555 1555 2.32
SITE 1 CTA 10 ZN A 301 GLY A 179 ASN A 180 LEU A 181 SITE 2 CTA 10 ALA A 182 GLU A 219 PRO A 238 TYR A 240 SITE 3 CTA 10 ARG A 214 VAL A 215 SITE 1 CTB 10 ZN B 301 GLY B 179 ASN B 180 LEU B 181 SITE 2 CTB 10 ALA B 182 GLU B 219 PRO B 238 TYR B 240 SITE 3 CTB 10 ARG B 214 VAL B 215 SITE 1 AC1 3 HIS A 218 HIS A 222 HIS A 228 SITE 1 AC2 4 HIS A 168 ASP A 170 HIS A 183 HIS A 196 SITE 1 AC3 6 ASP A 175 GLY A 176 GLY A 178 ASN A 180 SITE 2 AC3 6 ASP A 198 GLU A 201 SITE 1 AC4 5 ASP A 124 GLU A 199 GLU A 201 HOH A 343 SITE 2 AC4 5 HOH A 354 SITE 1 AC5 6 ASP A 158 GLY A 190 GLY A 192 ASP A 194 SITE 2 AC5 6 HOH A 310 HOH A 319 SITE 1 AC6 3 HIS B 218 HIS B 222 HIS B 228 SITE 1 AC7 4 HIS B 168 ASP B 170 HIS B 183 HIS B 196 SITE 1 AC8 6 ASP B 175 GLY B 176 GLY B 178 ASN B 180 SITE 2 AC8 6 ASP B 198 GLU B 201 SITE 1 AC9 5 ASP B 124 GLU B 199 GLU B 201 HOH B 340 SITE 2 AC9 5 HOH B 341 SITE 1 BC1 6 ASP B 158 GLY B 190 GLY B 192 ASP B 194 SITE 2 BC1 6 HOH B 310 HOH B 377
CRYST1 71.000 50.500 48.000 90.00 100.00 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.014085 0.000000 0.002483 0.00000
SCALE2 0.000000 0.019802 0.000000 0.00000
SCALE3 0.000000 0.000000 0.021155 0.00000