10 20 30 40 50 60 70 80 1CFG - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER COAGULATION FACTOR 10-NOV-94 1CFG
TITLE MEMBRANE-BINDING PEPTIDE FROM THE C2 DOMAIN OF FACTOR VIII TITLE 2 FORMS AN AMPHIPATHIC STRUCTURE AS DETERMINED BY NMR TITLE 3 SPECTROSCOPY
COMPND MOL_ID: 1; COMPND 2 MOLECULE: COAGULATION FACTOR VIII; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606
KEYWDS COAGULATION FACTOR
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR J.D.BALEJA,G.E.GILBERT
REVDAT 2 24-FEB-09 1CFG 1 VERSN REVDAT 1 02-NOV-95 1CFG 0
JRNL AUTH G.E.GILBERT,J.D.BALEJA JRNL TITL MEMBRANE-BINDING PEPTIDE FROM THE C2 DOMAIN OF JRNL TITL 2 FACTOR VIII FORMS AN AMPHIPATHIC STRUCTURE AS JRNL TITL 3 DETERMINED BY NMR SPECTROSCOPY. JRNL REF BIOCHEMISTRY V. 34 3022 1995 JRNL REFN ISSN 0006-2960 JRNL PMID 7893714 JRNL DOI 10.1021/BI00009A033
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1CFG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 1 TRP A 11 CB TRP A 11 CG 0.116 REMARK 500 1 GLU A 20 CD GLU A 20 OE2 0.122 REMARK 500 2 TRP A 11 CB TRP A 11 CG 0.120 REMARK 500 2 GLU A 20 CD GLU A 20 OE2 0.123 REMARK 500 3 TRP A 11 CB TRP A 11 CG 0.115 REMARK 500 3 GLU A 20 CD GLU A 20 OE2 0.123 REMARK 500 4 TRP A 11 CB TRP A 11 CG 0.118 REMARK 500 4 GLU A 20 CD GLU A 20 OE2 0.122 REMARK 500 5 TRP A 11 CB TRP A 11 CG 0.118 REMARK 500 5 GLU A 20 CD GLU A 20 OE1 0.122 REMARK 500 6 TRP A 11 CB TRP A 11 CG 0.121 REMARK 500 6 GLU A 20 CD GLU A 20 OE2 0.122 REMARK 500 7 TRP A 11 CB TRP A 11 CG 0.124 REMARK 500 7 GLU A 20 CD GLU A 20 OE2 0.123 REMARK 500 8 TRP A 11 CB TRP A 11 CG 0.122 REMARK 500 8 GLU A 20 CD GLU A 20 OE1 0.122 REMARK 500 9 TRP A 11 CB TRP A 11 CG 0.119 REMARK 500 9 GLU A 20 CD GLU A 20 OE2 0.122 REMARK 500 10 TRP A 11 CB TRP A 11 CG 0.115 REMARK 500 10 GLU A 20 CD GLU A 20 OE1 0.123 REMARK 500 11 TRP A 11 CB TRP A 11 CG 0.115 REMARK 500 11 GLU A 20 CD GLU A 20 OE2 0.123 REMARK 500 12 TRP A 11 CB TRP A 11 CG 0.118 REMARK 500 12 GLU A 20 CD GLU A 20 OE1 0.122 REMARK 500 13 TRP A 11 CB TRP A 11 CG 0.122 REMARK 500 13 GLU A 20 CD GLU A 20 OE1 0.122 REMARK 500 14 TRP A 11 CB TRP A 11 CG 0.123 REMARK 500 14 GLU A 20 CD GLU A 20 OE2 0.123 REMARK 500 15 TRP A 11 CB TRP A 11 CG 0.117 REMARK 500 15 GLU A 20 CD GLU A 20 OE1 0.122 REMARK 500 16 TRP A 11 CB TRP A 11 CG 0.117 REMARK 500 16 GLU A 20 CD GLU A 20 OE2 0.122 REMARK 500 17 TRP A 11 CB TRP A 11 CG 0.117 REMARK 500 17 GLU A 20 CD GLU A 20 OE1 0.122 REMARK 500 18 TRP A 11 CB TRP A 11 CG 0.121 REMARK 500 18 GLU A 20 CD GLU A 20 OE1 0.123 REMARK 500 19 TRP A 11 CB TRP A 11 CG 0.124 REMARK 500 19 GLU A 20 CD GLU A 20 OE2 0.123 REMARK 500 20 TRP A 11 CB TRP A 11 CG 0.124 REMARK 500 20 GLU A 20 CD GLU A 20 OE1 0.122 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 ARG A 2 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 1 LEU A 4 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 1 ARG A 5 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 1 ILE A 6 N - CA - CB ANGL. DEV. = 16.5 DEGREES REMARK 500 1 HIS A 7 CB - CG - CD2 ANGL. DEV. = 11.0 DEGREES REMARK 500 1 HIS A 7 CB - CG - ND1 ANGL. DEV. = -12.0 DEGREES REMARK 500 1 HIS A 7 C - N - CA ANGL. DEV. = 17.7 DEGREES REMARK 500 1 PRO A 8 N - CD - CG ANGL. DEV. = 8.1 DEGREES REMARK 500 1 TRP A 11 CA - CB - CG ANGL. DEV. = 26.9 DEGREES REMARK 500 1 TRP A 11 CD1 - NE1 - CE2 ANGL. DEV. = -6.4 DEGREES REMARK 500 1 HIS A 13 CB - CG - CD2 ANGL. DEV. = 11.0 DEGREES REMARK 500 1 HIS A 13 CB - CG - ND1 ANGL. DEV. = -12.5 DEGREES REMARK 500 1 ILE A 15 N - CA - CB ANGL. DEV. = 15.6 DEGREES REMARK 500 1 LEU A 17 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 1 LEU A 17 C - N - CA ANGL. DEV. = 15.1 DEGREES REMARK 500 1 ARG A 18 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 2 ARG A 2 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 2 ARG A 5 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 2 ILE A 6 N - CA - CB ANGL. DEV. = 16.0 DEGREES REMARK 500 2 ILE A 6 C - N - CA ANGL. DEV. = 15.2 DEGREES REMARK 500 2 HIS A 7 CB - CG - CD2 ANGL. DEV. = 10.9 DEGREES REMARK 500 2 HIS A 7 CB - CG - ND1 ANGL. DEV. = -11.9 DEGREES REMARK 500 2 PRO A 8 N - CD - CG ANGL. DEV. = 9.3 DEGREES REMARK 500 2 TRP A 11 CA - CB - CG ANGL. DEV. = 28.2 DEGREES REMARK 500 2 TRP A 11 CD1 - NE1 - CE2 ANGL. DEV. = -6.4 DEGREES REMARK 500 2 HIS A 13 CB - CG - CD2 ANGL. DEV. = 10.7 DEGREES REMARK 500 2 HIS A 13 CB - CG - ND1 ANGL. DEV. = -11.8 DEGREES REMARK 500 2 ILE A 15 N - CA - CB ANGL. DEV. = 15.3 DEGREES REMARK 500 2 LEU A 17 C - N - CA ANGL. DEV. = 15.1 DEGREES REMARK 500 2 ARG A 18 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 3 ARG A 2 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 3 ARG A 5 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 3 ILE A 6 N - CA - CB ANGL. DEV. = 16.4 DEGREES REMARK 500 3 HIS A 7 CB - CG - CD2 ANGL. DEV. = 10.7 DEGREES REMARK 500 3 HIS A 7 CB - CG - ND1 ANGL. DEV. = -11.6 DEGREES REMARK 500 3 HIS A 7 C - N - CA ANGL. DEV. = 16.3 DEGREES REMARK 500 3 PRO A 8 N - CD - CG ANGL. DEV. = 9.2 DEGREES REMARK 500 3 GLN A 9 C - N - CA ANGL. DEV. = 15.1 DEGREES REMARK 500 3 TRP A 11 CA - CB - CG ANGL. DEV. = 28.1 DEGREES REMARK 500 3 TRP A 11 CD1 - NE1 - CE2 ANGL. DEV. = -6.4 DEGREES REMARK 500 3 HIS A 13 CB - CG - CD2 ANGL. DEV. = 11.0 DEGREES REMARK 500 3 HIS A 13 CB - CG - ND1 ANGL. DEV. = -12.3 DEGREES REMARK 500 3 ILE A 15 N - CA - CB ANGL. DEV. = 16.1 DEGREES REMARK 500 3 LEU A 17 C - N - CA ANGL. DEV. = 15.9 DEGREES REMARK 500 3 ARG A 18 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 3 ARG A 18 C - N - CA ANGL. DEV. = 15.5 DEGREES REMARK 500 4 ARG A 2 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 4 ARG A 5 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 4 ILE A 6 N - CA - CB ANGL. DEV. = 16.8 DEGREES REMARK 500 4 HIS A 7 CB - CG - CD2 ANGL. DEV. = 10.2 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 297 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 2 3.82 -68.44 REMARK 500 1 TYR A 3 62.89 -104.24 REMARK 500 1 LEU A 4 -141.42 -53.14 REMARK 500 1 ARG A 5 -71.64 -61.75 REMARK 500 1 VAL A 21 -70.78 -116.23 REMARK 500 2 LEU A 4 -170.42 -65.57 REMARK 500 2 PRO A 8 -17.70 -49.05 REMARK 500 2 GLU A 20 33.60 -70.41 REMARK 500 2 VAL A 21 -70.91 -113.63 REMARK 500 3 LEU A 4 -157.75 -64.12 REMARK 500 3 HIS A 7 63.58 -117.97 REMARK 500 3 PRO A 8 -16.98 -48.04 REMARK 500 3 VAL A 21 -60.86 -126.77 REMARK 500 4 LEU A 4 -163.49 -54.17 REMARK 500 4 VAL A 21 63.52 -101.88 REMARK 500 5 LEU A 4 -173.31 -66.03 REMARK 500 5 HIS A 7 63.34 -103.79 REMARK 500 5 GLU A 20 25.94 -73.99 REMARK 500 6 LEU A 4 -146.19 -64.75 REMARK 500 6 ILE A 6 119.43 -160.82 REMARK 500 6 HIS A 7 60.68 -115.88 REMARK 500 7 ARG A 2 3.19 -69.30 REMARK 500 7 TYR A 3 53.73 -104.07 REMARK 500 7 LEU A 4 -168.97 -48.53 REMARK 500 7 ILE A 6 118.54 -166.19 REMARK 500 7 PRO A 8 -16.48 -42.98 REMARK 500 8 LEU A 4 -173.34 -52.68 REMARK 500 8 HIS A 7 64.07 -102.46 REMARK 500 8 GLU A 20 24.42 -75.78 REMARK 500 8 VAL A 21 89.32 -61.33 REMARK 500 9 LEU A 4 -145.61 -52.74 REMARK 500 9 HIS A 7 59.79 -104.79 REMARK 500 10 LEU A 4 -149.06 -55.37 REMARK 500 10 ARG A 5 -74.69 -53.90 REMARK 500 10 GLU A 20 21.25 -76.95 REMARK 500 11 LEU A 4 -138.94 -61.69 REMARK 500 11 PRO A 8 -18.57 -44.16 REMARK 500 11 GLN A 14 -16.29 -48.09 REMARK 500 11 GLU A 20 -85.21 -76.64 REMARK 500 11 VAL A 21 -80.59 -132.75 REMARK 500 12 TYR A 3 46.34 -103.25 REMARK 500 12 LEU A 4 -153.61 -50.56 REMARK 500 12 GLU A 20 26.08 -79.62 REMARK 500 13 LEU A 4 -179.61 -50.54 REMARK 500 13 PRO A 8 -19.82 -49.59 REMARK 500 13 GLU A 20 24.80 -68.96 REMARK 500 13 VAL A 21 -71.14 -64.06 REMARK 500 14 LEU A 4 -165.46 -53.86 REMARK 500 14 GLU A 20 4.09 -54.48 REMARK 500 15 LEU A 4 -172.52 -53.79 REMARK 500 15 ILE A 6 116.27 -164.88 REMARK 500 15 HIS A 7 61.42 -110.77 REMARK 500 16 ARG A 2 -90.32 -58.27 REMARK 500 16 LEU A 4 -134.92 -65.36 REMARK 500 17 LEU A 4 -162.48 -54.56 REMARK 500 17 HIS A 7 56.64 -119.84 REMARK 500 17 GLU A 20 25.11 -77.29 REMARK 500 18 HIS A 7 65.76 -110.17 REMARK 500 18 GLU A 20 -2.39 -54.86 REMARK 500 19 LEU A 4 -152.36 -62.79 REMARK 500 19 HIS A 7 65.38 -104.70 REMARK 500 20 LEU A 4 -173.07 -67.28 REMARK 500 20 HIS A 7 64.93 -102.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG A 2 TYR A 3 18 -149.95 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1CFG A 1 22 UNP P00451 FA8_HUMAN 2322 2343
SEQRES 1 A 22 THR ARG TYR LEU ARG ILE HIS PRO GLN SER TRP VAL HIS SEQRES 2 A 22 GLN ILE ALA LEU ARG MET GLU VAL LEU
HELIX 1 1 SER A 10 LEU A 17 1 8
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000