10 20 30 40 50 60 70 80 1CAV - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SEED STORAGE PROTEIN 27-MAY-93 1CAV
TITLE THE THREE-DIMENSIONAL STRUCTURE OF CANAVALIN FROM JACK BEAN (CANAVALIA TITLE 2 ENSIFORMIS)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CANAVALIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CANAVALIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANAVALIA ENSIFORMIS; SOURCE 3 ORGANISM_COMMON: JACK BEAN; SOURCE 4 ORGANISM_TAXID: 3823; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: CANAVALIA ENSIFORMIS; SOURCE 7 ORGANISM_COMMON: JACK BEAN; SOURCE 8 ORGANISM_TAXID: 3823
KEYWDS SEED STORAGE PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR T-P.KO,J.D.NG,A.MCPHERSON
REVDAT 5 04-DEC-13 1CAV 1 JRNL REVDAT 4 13-JUL-11 1CAV 1 VERSN REVDAT 3 24-FEB-09 1CAV 1 VERSN REVDAT 2 01-APR-03 1CAV 1 JRNL REVDAT 1 31-OCT-93 1CAV 0
JRNL AUTH T.P.KO,J.D.NG,J.DAY,A.GREENWOOD,A.MCPHERSON JRNL TITL DETERMINATION OF THREE CRYSTAL STRUCTURES OF CANAVALIN BY JRNL TITL 2 MOLECULAR REPLACEMENT. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 49 478 1993 JRNL REFN ISSN 0907-4449 JRNL PMID 15299507 JRNL DOI 10.1107/S0907444993004056
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.-P.KO,J.D.NG,J.DAY,A.GREENWOOD,A.MCPHERSON REMARK 1 TITL THE THREE-DIMENSIONAL STRUCTURE OF CANAVALIN FROM JACK BEAN REMARK 1 TITL 2 (CANAVALIA ENSIFORMIS). REMARK 1 REF PLANT PHYSIOL. V. 101 729 1993 REMARK 1 REFN ISSN 0032-0889 REMARK 1 PMID 8310056 REMARK 1 DOI 10.1104/PP.101.3.729
REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 10876 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2930 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.020 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.970 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1CAV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.82000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 25.82000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 25.82000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 26970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -160.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 63.17500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 109.42231 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -63.17500 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 109.42231 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN A 215 N GLY A 217 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A 199 O LEU B 379 2665 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 52 NE ARG A 52 CZ 0.079 REMARK 500 GLU A 75 CD GLU A 75 OE2 0.076 REMARK 500 GLU A 81 CD GLU A 81 OE1 0.080 REMARK 500 GLU A 90 CD GLU A 90 OE1 0.070 REMARK 500 GLU A 196 CD GLU A 196 OE1 0.086 REMARK 500 GLU A 213 CD GLU A 213 OE1 0.075 REMARK 500 GLU A 214 CD GLU A 214 OE2 0.073 REMARK 500 GLU A 216 CD GLU A 216 OE1 0.080 REMARK 500 GLU B 267 CD GLU B 267 OE1 0.078 REMARK 500 GLU B 290 CD GLU B 290 OE1 0.094 REMARK 500 GLU B 310 CD GLU B 310 OE1 0.092 REMARK 500 GLU B 314 CD GLU B 314 OE2 0.077 REMARK 500 GLU B 316 CD GLU B 316 OE2 0.073 REMARK 500 GLU B 321 CD GLU B 321 OE2 0.071 REMARK 500 GLU B 342 CD GLU B 342 OE1 0.072 REMARK 500 GLU B 375 CD GLU B 375 OE2 0.088 REMARK 500 GLU B 404 CD GLU B 404 OE1 0.078 REMARK 500 GLU B 407 CD GLU B 407 OE2 0.084 REMARK 500 GLU B 408 CD GLU B 408 OE1 0.069 REMARK 500 GLU B 411 CD GLU B 411 OE1 0.077 REMARK 500 GLU B 415 CD GLU B 415 OE1 0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 46 N - CA - C ANGL. DEV. = 18.4 DEGREES REMARK 500 ARG A 68 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP A 76 CB - CG - OD1 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 85 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP A 105 CB - CG - OD1 ANGL. DEV. = -7.7 DEGREES REMARK 500 ASP A 105 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 125 CB - CG - OD1 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP A 128 CB - CG - OD1 ANGL. DEV. = -6.9 DEGREES REMARK 500 ASP A 128 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ILE A 149 CB - CA - C ANGL. DEV. = -12.4 DEGREES REMARK 500 PRO A 151 C - N - CD ANGL. DEV. = -14.1 DEGREES REMARK 500 ASP A 152 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASN A 153 CA - C - N ANGL. DEV. = -13.8 DEGREES REMARK 500 ASN A 154 C - N - CA ANGL. DEV. = 15.4 DEGREES REMARK 500 GLN A 155 N - CA - CB ANGL. DEV. = 11.0 DEGREES REMARK 500 LYS A 161 N - CA - CB ANGL. DEV. = 11.6 DEGREES REMARK 500 PRO A 169 C - N - CD ANGL. DEV. = -23.0 DEGREES REMARK 500 ASP A 174 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 PRO A 184 C - N - CD ANGL. DEV. = -18.9 DEGREES REMARK 500 ASP A 204 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 GLU A 214 N - CA - C ANGL. DEV. = -18.7 DEGREES REMARK 500 GLN A 215 CB - CA - C ANGL. DEV. = 12.5 DEGREES REMARK 500 ASP B 246 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP B 246 CB - CG - OD2 ANGL. DEV. = -6.9 DEGREES REMARK 500 ASP B 246 N - CA - C ANGL. DEV. = 18.3 DEGREES REMARK 500 PRO B 248 C - N - CA ANGL. DEV. = 14.0 DEGREES REMARK 500 PRO B 248 C - N - CD ANGL. DEV. = -37.7 DEGREES REMARK 500 ARG B 252 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ASP B 255 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP B 255 CB - CG - OD2 ANGL. DEV. = -6.8 DEGREES REMARK 500 PRO B 270 C - N - CD ANGL. DEV. = -15.5 DEGREES REMARK 500 ASP B 278 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP B 280 CB - CG - OD1 ANGL. DEV. = -7.5 DEGREES REMARK 500 ASP B 280 CB - CG - OD2 ANGL. DEV. = 7.4 DEGREES REMARK 500 ARG B 301 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 GLN B 324 N - CA - C ANGL. DEV. = -16.2 DEGREES REMARK 500 ASP B 344 CB - CG - OD1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG B 376 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 392 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 PRO B 400 C - N - CA ANGL. DEV. = 10.0 DEGREES REMARK 500 VAL B 419 N - CA - CB ANGL. DEV. = -14.2 DEGREES REMARK 500 ASP B 420 N - CA - CB ANGL. DEV. = 11.1 DEGREES REMARK 500 ASP B 420 CB - CG - OD1 ANGL. DEV. = -7.4 DEGREES REMARK 500 ASP B 420 CB - CG - OD2 ANGL. DEV. = 7.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 45 141.85 133.30 REMARK 500 ASN A 46 77.76 8.43 REMARK 500 PRO A 48 -84.47 -53.54 REMARK 500 ASN A 62 -173.14 -171.80 REMARK 500 GLU A 75 -62.35 -91.13 REMARK 500 LYS A 79 2.33 -67.04 REMARK 500 ARG A 84 -31.75 -29.24 REMARK 500 PRO A 124 21.75 -63.67 REMARK 500 ASP A 125 -6.83 -144.64 REMARK 500 ALA A 142 -179.74 -66.15 REMARK 500 ASP A 152 -17.53 -3.90 REMARK 500 ASN A 153 178.69 -48.04 REMARK 500 ASN A 154 -56.29 -121.21 REMARK 500 PHE A 166 -83.04 -144.14 REMARK 500 ARG A 167 -60.60 -16.46 REMARK 500 PRO A 169 121.62 -21.64 REMARK 500 PRO A 184 -168.22 -102.29 REMARK 500 PHE A 190 -167.73 -70.49 REMARK 500 GLN A 208 66.45 -103.00 REMARK 500 THR A 209 42.31 136.99 REMARK 500 LEU A 210 -104.81 -151.01 REMARK 500 GLU A 213 69.99 -117.67 REMARK 500 GLN A 215 -82.83 -95.61 REMARK 500 GLU A 216 97.55 -53.31 REMARK 500 GLN B 245 -109.65 11.06 REMARK 500 ASP B 246 -0.31 19.65 REMARK 500 LYS B 247 -139.21 -98.39 REMARK 500 PRO B 248 44.00 -84.94 REMARK 500 ARG B 252 -67.72 -156.79 REMARK 500 ASN B 260 -121.89 -178.02 REMARK 500 ASN B 261 -71.79 -140.21 REMARK 500 GLU B 267 110.91 -160.58 REMARK 500 GLU B 290 106.08 -50.11 REMARK 500 PRO B 296 124.75 -26.04 REMARK 500 GLU B 321 -104.92 -68.29 REMARK 500 GLN B 323 45.64 -92.45 REMARK 500 GLN B 325 -41.79 -136.63 REMARK 500 LEU B 328 -74.40 -30.16 REMARK 500 SER B 341 141.96 -172.54 REMARK 500 GLU B 342 109.33 -10.70 REMARK 500 PRO B 349 159.78 -43.47 REMARK 500 SER B 350 49.39 -81.20 REMARK 500 SER B 351 -11.35 168.18 REMARK 500 ASN B 370 43.84 73.18 REMARK 500 ALA B 371 -72.16 -64.30 REMARK 500 GLU B 372 110.18 -29.64 REMARK 500 ASN B 373 -2.15 100.10 REMARK 500 ALA B 380 139.31 -170.46 REMARK 500 GLN B 389 -23.21 -140.17 REMARK 500 PRO B 400 44.60 -41.79 REMARK 500 REMARK 500 THIS ENTRY HAS 57 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASN A 62 -10.73 REMARK 500 GLU A 214 10.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 GLN A 45 24.1 L L OUTSIDE RANGE REMARK 500 ASN A 46 3.4 L L EXPECTING SP3 REMARK 500 LEU A 50 9.0 L L EXPECTING SP3 REMARK 500 ASN A 54 24.9 L L OUTSIDE RANGE REMARK 500 LYS A 55 24.9 L L OUTSIDE RANGE REMARK 500 GLU A 75 5.0 L L EXPECTING SP3 REMARK 500 GLU A 81 20.2 L L OUTSIDE RANGE REMARK 500 ASN A 96 24.9 L L OUTSIDE RANGE REMARK 500 LEU A 108 25.0 L L OUTSIDE RANGE REMARK 500 LEU A 111 21.0 L L OUTSIDE RANGE REMARK 500 VAL A 122 24.0 L L OUTSIDE RANGE REMARK 500 ASN A 153 13.3 L L OUTSIDE RANGE REMARK 500 GLN A 155 8.6 L L EXPECTING SP3 REMARK 500 ARG A 158 24.0 L L OUTSIDE RANGE REMARK 500 LYS A 161 19.0 L L OUTSIDE RANGE REMARK 500 LYS A 181 23.0 L L OUTSIDE RANGE REMARK 500 ASP A 204 21.4 L L OUTSIDE RANGE REMARK 500 GLU A 207 22.4 L L OUTSIDE RANGE REMARK 500 ASP B 246 5.3 L L EXPECTING SP3 REMARK 500 ASN B 250 24.7 L L OUTSIDE RANGE REMARK 500 ARG B 252 20.0 L L OUTSIDE RANGE REMARK 500 GLN B 275 20.4 L L OUTSIDE RANGE REMARK 500 ASP B 280 25.0 L L OUTSIDE RANGE REMARK 500 MET B 288 24.0 L L OUTSIDE RANGE REMARK 500 LEU B 306 20.8 L L OUTSIDE RANGE REMARK 500 VAL B 318 24.1 L L OUTSIDE RANGE REMARK 500 GLU B 321 17.3 L L OUTSIDE RANGE REMARK 500 GLN B 323 20.3 L L OUTSIDE RANGE REMARK 500 LEU B 328 24.0 L L OUTSIDE RANGE REMARK 500 MET B 331 22.4 L L OUTSIDE RANGE REMARK 500 VAL B 347 23.9 L L OUTSIDE RANGE REMARK 500 SER B 350 24.3 L L OUTSIDE RANGE REMARK 500 ASN B 373 1.7 L L EXPECTING SP3 REMARK 500 HIS B 382 24.7 L L OUTSIDE RANGE REMARK 500 GLU B 384 24.1 L L OUTSIDE RANGE REMARK 500 GLN B 389 24.8 L L OUTSIDE RANGE REMARK 500 ARG B 392 24.9 L L OUTSIDE RANGE REMARK 500 GLU B 411 18.5 L L OUTSIDE RANGE REMARK 500 ASP B 420 24.5 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
DBREF 1CAV A 44 224 UNP P50477 CANA_CANEN 44 224 DBREF 1CAV B 241 424 UNP P50477 CANA_CANEN 241 424
SEQRES 1 A 181 ALA GLN ASN ASN PRO TYR LEU PHE ARG SER ASN LYS PHE SEQRES 2 A 181 LEU THR LEU PHE LYS ASN GLN HIS GLY SER LEU ARG LEU SEQRES 3 A 181 LEU GLN ARG PHE ASN GLU ASP THR GLU LYS LEU GLU ASN SEQRES 4 A 181 LEU ARG ASP TYR ARG VAL LEU GLU TYR CYS SER LYS PRO SEQRES 5 A 181 ASN THR LEU LEU LEU PRO HIS HIS SER ASP SER ASP LEU SEQRES 6 A 181 LEU VAL LEU VAL LEU GLU GLY GLN ALA ILE LEU VAL LEU SEQRES 7 A 181 VAL ASN PRO ASP GLY ARG ASP THR TYR LYS LEU ASP GLN SEQRES 8 A 181 GLY ASP ALA ILE LYS ILE GLN ALA GLY THR PRO PHE TYR SEQRES 9 A 181 LEU ILE ASN PRO ASP ASN ASN GLN ASN LEU ARG ILE LEU SEQRES 10 A 181 LYS PHE ALA ILE THR PHE ARG ARG PRO GLY THR VAL GLU SEQRES 11 A 181 ASP PHE PHE LEU SER SER THR LYS ARG LEU PRO SER TYR SEQRES 12 A 181 LEU SER ALA PHE SER LYS ASN PHE LEU GLU ALA SER TYR SEQRES 13 A 181 ASP SER PRO TYR ASP GLU ILE GLU GLN THR LEU LEU GLN SEQRES 14 A 181 GLU GLU GLN GLU GLY VAL ILE VAL LYS MET PRO LYS SEQRES 1 B 184 THR LEU SER SER GLN ASP LYS PRO PHE ASN LEU ARG SER SEQRES 2 B 184 ARG ASP PRO ILE TYR SER ASN ASN TYR GLY LYS LEU TYR SEQRES 3 B 184 GLU ILE THR PRO GLU LYS ASN SER GLN LEU ARG ASP LEU SEQRES 4 B 184 ASP ILE LEU LEU ASN CYS LEU GLN MET ASN GLU GLY ALA SEQRES 5 B 184 LEU PHE VAL PRO HIS TYR ASN SER ARG ALA THR VAL ILE SEQRES 6 B 184 LEU VAL ALA ASN GLU GLY ARG ALA GLU VAL GLU LEU VAL SEQRES 7 B 184 GLY LEU GLU GLN GLN GLN GLN GLN GLY LEU GLU SER MET SEQRES 8 B 184 GLN LEU ARG ARG TYR ALA ALA THR LEU SER GLU GLY ASP SEQRES 9 B 184 ILE ILE VAL ILE PRO SER SER PHE PRO VAL ALA LEU LYS SEQRES 10 B 184 ALA ALA SER ASP LEU ASN MET VAL GLY ILE GLY VAL ASN SEQRES 11 B 184 ALA GLU ASN ASN GLU ARG ASN PHE LEU ALA GLY HIS LYS SEQRES 12 B 184 GLU ASN VAL ILE ARG GLN ILE PRO ARG GLN VAL SER ASP SEQRES 13 B 184 LEU THR PHE PRO GLY SER GLY GLU GLU VAL GLU GLU LEU SEQRES 14 B 184 LEU GLU ASN GLN LYS GLU SER TYR PHE VAL ASP GLY GLN SEQRES 15 B 184 PRO ARG
HELIX 1 1 TYR A 186 PHE A 190 5 5 HELIX 2 2 SER A 191 ASP A 200 1 10 HELIX 3 3 PRO A 202 ILE A 206 5 5 HELIX 4 4 ASN B 273 ASP B 278 1 6 HELIX 5 5 PRO B 391 PHE B 399 1 9 HELIX 6 6 SER B 402 ASN B 412 1 11
SHEET 1 A 6 ARG A 52 SER A 53 0 SHEET 2 A 6 ILE B 345 ILE B 348 -1 N ILE B 345 O SER A 53 SHEET 3 A 6 THR B 303 GLU B 310 -1 O VAL B 304 N ILE B 348 SHEET 4 A 6 LEU B 362 VAL B 369 -1 N ASN B 363 O GLU B 310 SHEET 5 A 6 LEU B 282 MET B 288 -1 O LEU B 282 N GLY B 368 SHEET 6 A 6 GLY B 263 ILE B 268 -1 N LYS B 264 O GLN B 287 SHEET 1 B 6 PHE A 56 ASN A 62 0 SHEET 2 B 6 GLY A 65 LEU A 70 -1 N GLY A 65 O ASN A 62 SHEET 3 B 6 TYR A 86 SER A 93 -1 O VAL A 88 N LEU A 70 SHEET 4 B 6 LEU A 157 ILE A 164 -1 N LEU A 157 O SER A 93 SHEET 5 B 6 ASP A 107 GLU A 114 -1 O ASP A 107 N ILE A 164 SHEET 6 B 6 ALA A 137 ILE A 140 -1 O ILE A 138 N VAL A 110 SHEET 1 C 5 GLY A 126 ASP A 133 0 SHEET 2 C 5 GLN A 116 ASN A 123 -1 O ALA A 117 N LEU A 132 SHEET 3 C 5 PHE A 146 ILE A 149 -1 O TYR A 147 N VAL A 120 SHEET 4 C 5 THR A 97 SER A 104 -1 N LEU A 99 O LEU A 148 SHEET 5 C 5 ASP A 174 PHE A 176 -1 N PHE A 175 O HIS A 103 SHEET 1 D 5 GLY A 126 ASP A 133 0 SHEET 2 D 5 GLN A 116 ASN A 123 -1 O ALA A 117 N LEU A 132 SHEET 3 D 5 PHE A 146 ILE A 149 -1 O TYR A 147 N VAL A 120 SHEET 4 D 5 THR A 97 SER A 104 -1 N LEU A 99 O LEU A 148 SHEET 5 D 5 ILE A 219 LYS A 221 -1 N VAL A 220 O LEU A 98 SHEET 1 E 5 ARG B 334 SER B 341 0 SHEET 2 E 5 ARG B 312 GLY B 319 -1 O ALA B 313 N LEU B 340 SHEET 3 E 5 VAL B 354 ALA B 358 -1 N ALA B 355 O GLU B 316 SHEET 4 E 5 PHE B 294 ASN B 299 -1 O PHE B 294 N LEU B 356 SHEET 5 E 5 ARG B 376 PHE B 378 -1 N ASN B 377 O TYR B 298
CRYST1 126.350 126.350 51.640 90.00 90.00 120.00 P 63 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007915 0.004569 0.000000 0.00000
SCALE2 0.000000 0.009139 0.000000 0.00000
SCALE3 0.000000 0.000000 0.019365 0.00000