10 20 30 40 50 60 70 80 1C4S - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TEXTURE OF CONNECTIVE TISSUE 23-MAY-78 1C4S
TITLE CHONDROITIN-4-SULFATE. THE STRUCTURE OF A SULFATED TITLE 2 GLYCOSAMINOGLYCAN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUGAR (12-MER); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 TISSUE: NASAL SEPTA
KEYWDS TEXTURE OF CONNECTIVE TISSUE
EXPDTA FIBER DIFFRACTION
AUTHOR S.ARNOTT
REVDAT 7 25-AUG-09 1C4S 1 SOURCE REVDAT 6 24-FEB-09 1C4S 1 VERSN REVDAT 5 01-APR-03 1C4S 1 JRNL REVDAT 4 15-JUL-92 1C4S 1 FORMUL REVDAT 3 30-SEP-83 1C4S 1 REVDAT REVDAT 2 01-OCT-80 1C4S 1 REMARK REVDAT 1 28-MAR-80 1C4S 0
JRNL AUTH W.T.WINTER,S.ARNOTT,D.H.ISAAC,E.D.ATKINS JRNL TITL CHONDROITIN 4-SULFATE: THE STRUCTURE OF A SULFATED JRNL TITL 2 GLYCOSAMINOGLYCAN. JRNL REF J.MOL.BIOL. V. 125 1 1978 JRNL REFN ISSN 0022-2836 JRNL PMID 712855 JRNL DOI 10.1016/0022-2836(78)90251-6
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.J.C.SMITH,S.ARNOTT REMARK 1 TITL LALS, A LINKED-ATOM LEAST-SQUARES RECIPROCAL-SPACE REMARK 1 TITL 2 REFINEMENT SYSTEM INCORPORATING STEREOCHEMICAL REMARK 1 TITL 3 RESTRAINTS TO SUPPLEMENT SPARSE DIFFRACTION DATA REMARK 1 REF ACTA CRYSTALLOGR.,SECT.A V. 34 3 1978 REMARK 1 REFN ISSN 0108-7673
REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : LALS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 144 REMARK 3 SOLVENT ATOMS : 30 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1C4S COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : FIBER DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 205 REMARK 205 FIBER DIFFRACTION REMARK 205 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM FIBER REMARK 205 DIFFRACTION DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 205 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE REMARK 205 VALUES ON THESE RECORDS ARE MEANINGLESS.
REMARK 300 REMARK 300 BIOMOLECULE: NULL REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SIX-RESIDUE CHAIN SEGMENT GIVEN HERE WAS OBTAINED REMARK 300 FROM THE PUBLISHED COORDINATES FOR A TWO-RESIDUE FRAGMENT BY THE REMARK 300 ACTION OF A 31 SCREW AXIS AS GIVEN IN THE PAPER CITED IN JRNL REMARK 300 RECORDS ABOVE.
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 7 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A 8 DISTANCE = 5.78 ANGSTROMS REMARK 525 HOH A 12 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A 15 DISTANCE = 5.23 ANGSTROMS REMARK 525 HOH A 16 DISTANCE = 5.53 ANGSTROMS REMARK 525 HOH A 17 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A 18 DISTANCE = 5.78 ANGSTROMS REMARK 525 HOH A 22 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A 27 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A 28 DISTANCE = 5.78 ANGSTROMS REMARK 525 HOH A 32 DISTANCE = 6.23 ANGSTROMS
REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GCU A 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GC4 A 1 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ASG A 2 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GCU A 3 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ASG A 4 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GC4 A 5 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ASG A 6 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 40 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 41 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 42 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 43 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 44 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 45
DBREF 1C4S A 1 6 PDB 1C4S 1C4S 1 6
SEQRES 1 A 6 GC4 ASG GCU ASG GC4 ASG
HET GC4 A 1 17 HET ASG A 2 29 HET GCU A 3 17 HET ASG A 4 29 HET GC4 A 5 17 HET ASG A 6 29 HET NA A 40 1 HET NA A 41 1 HET NA A 42 1 HET NA A 43 1 HET NA A 44 1 HET NA A 45 1
HETNAM GC4 4-DEOXY-D-GLUCURONIC ACID HETNAM ASG 2-DEOXY-2-ACETAMIDO-BETA-D-GALACTOSE-4-SULFATE HETNAM GCU D-GLUCURONIC ACID HETNAM NA SODIUM ION
FORMUL 1 GC4 2(C6 H10 O6) FORMUL 1 ASG 3(C8 H15 N O9 S) FORMUL 1 GCU C6 H10 O7 FORMUL 2 NA 6(NA 1+) FORMUL 3 HOH *30(H2 O)
LINK C4 GC4 A 1 O1 ASG A 2 1555 1555 1.43 LINK C3 ASG A 2 O1 GCU A 3 1555 1555 1.43 LINK C4 GCU A 3 O1 ASG A 4 1555 1555 1.43 LINK C3 ASG A 4 O1 GC4 A 5 1555 1555 1.43 LINK C4 GC4 A 5 O1 ASG A 6 1555 1555 1.43
SITE 1 AC1 8 ASG A 2 GCU A 3 ASG A 4 GC4 A 5 SITE 2 AC1 8 ASG A 6 HOH A 8 HOH A 18 HOH A 28 SITE 1 AC2 32 GC4 A 1 GCU A 3 ASG A 4 GC4 A 5 SITE 2 AC2 32 ASG A 6 HOH A 8 HOH A 10 HOH A 11 SITE 3 AC2 32 HOH A 12 HOH A 13 HOH A 15 HOH A 16 SITE 4 AC2 32 HOH A 18 HOH A 20 HOH A 21 HOH A 22 SITE 5 AC2 32 HOH A 23 HOH A 25 HOH A 26 HOH A 28 SITE 6 AC2 32 HOH A 30 HOH A 31 HOH A 32 HOH A 33 SITE 7 AC2 32 HOH A 35 HOH A 36 NA A 40 NA A 41 SITE 8 AC2 32 NA A 42 NA A 43 NA A 44 NA A 45 SITE 1 AC3 8 GC4 A 1 ASG A 2 ASG A 4 GC4 A 5 SITE 2 AC3 8 ASG A 6 HOH A 8 HOH A 18 HOH A 28 SITE 1 AC4 32 GC4 A 1 ASG A 2 GCU A 3 GC4 A 5 SITE 2 AC4 32 ASG A 6 HOH A 8 HOH A 10 HOH A 11 SITE 3 AC4 32 HOH A 12 HOH A 13 HOH A 15 HOH A 16 SITE 4 AC4 32 HOH A 18 HOH A 20 HOH A 21 HOH A 22 SITE 5 AC4 32 HOH A 23 HOH A 25 HOH A 26 HOH A 28 SITE 6 AC4 32 HOH A 30 HOH A 31 HOH A 32 HOH A 33 SITE 7 AC4 32 HOH A 35 HOH A 36 NA A 40 NA A 41 SITE 8 AC4 32 NA A 42 NA A 43 NA A 44 NA A 45 SITE 1 AC5 8 GC4 A 1 ASG A 2 GCU A 3 ASG A 4 SITE 2 AC5 8 ASG A 6 HOH A 8 HOH A 18 HOH A 28 SITE 1 AC6 32 GC4 A 1 ASG A 2 GCU A 3 ASG A 4 SITE 2 AC6 32 GC4 A 5 HOH A 8 HOH A 10 HOH A 11 SITE 3 AC6 32 HOH A 12 HOH A 13 HOH A 15 HOH A 16 SITE 4 AC6 32 HOH A 18 HOH A 20 HOH A 21 HOH A 22 SITE 5 AC6 32 HOH A 23 HOH A 25 HOH A 26 HOH A 28 SITE 6 AC6 32 HOH A 30 HOH A 31 HOH A 32 HOH A 33 SITE 7 AC6 32 HOH A 35 HOH A 36 NA A 40 NA A 41 SITE 8 AC6 32 NA A 42 NA A 43 NA A 44 NA A 45 SITE 1 AC7 18 ASG A 2 ASG A 4 ASG A 6 HOH A 7 SITE 2 AC7 18 HOH A 8 HOH A 9 HOH A 10 HOH A 11 SITE 3 AC7 18 HOH A 17 HOH A 18 HOH A 19 HOH A 20 SITE 4 AC7 18 HOH A 21 HOH A 27 HOH A 28 HOH A 29 SITE 5 AC7 18 HOH A 30 HOH A 31 SITE 1 AC8 21 ASG A 2 ASG A 4 ASG A 6 HOH A 11 SITE 2 AC8 21 HOH A 12 HOH A 13 HOH A 14 HOH A 15 SITE 3 AC8 21 HOH A 16 HOH A 21 HOH A 22 HOH A 23 SITE 4 AC8 21 HOH A 24 HOH A 25 HOH A 26 HOH A 31 SITE 5 AC8 21 HOH A 32 HOH A 33 HOH A 34 HOH A 35 SITE 6 AC8 21 HOH A 36 SITE 1 AC9 18 ASG A 2 ASG A 4 ASG A 6 HOH A 7 SITE 2 AC9 18 HOH A 8 HOH A 9 HOH A 10 HOH A 11 SITE 3 AC9 18 HOH A 17 HOH A 18 HOH A 19 HOH A 20 SITE 4 AC9 18 HOH A 21 HOH A 27 HOH A 28 HOH A 29 SITE 5 AC9 18 HOH A 30 HOH A 31 SITE 1 BC1 21 ASG A 2 ASG A 4 ASG A 6 HOH A 11 SITE 2 BC1 21 HOH A 12 HOH A 13 HOH A 14 HOH A 15 SITE 3 BC1 21 HOH A 16 HOH A 21 HOH A 22 HOH A 23 SITE 4 BC1 21 HOH A 24 HOH A 25 HOH A 26 HOH A 31 SITE 5 BC1 21 HOH A 32 HOH A 33 HOH A 34 HOH A 35 SITE 6 BC1 21 HOH A 36 SITE 1 BC2 18 ASG A 2 ASG A 4 ASG A 6 HOH A 7 SITE 2 BC2 18 HOH A 8 HOH A 9 HOH A 10 HOH A 11 SITE 3 BC2 18 HOH A 17 HOH A 18 HOH A 19 HOH A 20 SITE 4 BC2 18 HOH A 21 HOH A 27 HOH A 28 HOH A 29 SITE 5 BC2 18 HOH A 30 HOH A 31 SITE 1 BC3 21 ASG A 2 ASG A 4 ASG A 6 HOH A 11 SITE 2 BC3 21 HOH A 12 HOH A 13 HOH A 14 HOH A 15 SITE 3 BC3 21 HOH A 16 HOH A 21 HOH A 22 HOH A 23 SITE 4 BC3 21 HOH A 24 HOH A 25 HOH A 26 HOH A 31 SITE 5 BC3 21 HOH A 32 HOH A 33 HOH A 34 HOH A 35 SITE 6 BC3 21 HOH A 36
CRYST1 14.520 14.520 28.320 90.00 90.00 120.00 P 32 2 1 6
ORIGX1 0.068871 0.039762 0.000000 0.00000
ORIGX2 0.000000 0.079525 0.000000 0.00000
ORIGX3 0.000000 0.000000 0.035311 0.00000
SCALE1 0.068871 0.039762 0.000000 0.00000
SCALE2 0.000000 0.079525 0.000000 0.00000
SCALE3 0.000000 0.000000 0.035311 0.00000
TVECT 1 0.00000 0.00000 28.32000