10 20 30 40 50 60 70 80 1BJC - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER GLYCOPROTEIN 23-JUN-98 1BJC
TITLE SOLUTION NMR STRUCTURE OF AMYLOID BETA[F16], RESIDUES 1-28, TITLE 2 15 STRUCTURES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMYLOID BETA-PEPTIDE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ABETA [F16], RESIDUES 1-28; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: UNIDENTIFIED; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 32644
KEYWDS GLYCOPROTEIN, AMYLOID BETA-PEPTIDE, ALZHEIMER'S DISEASE
EXPDTA SOLUTION NMR
NUMMDL 15
AUTHOR S.-A.POULSEN,A.A.WATSON,D.J.CRAIK
REVDAT 3 24-FEB-09 1BJC 1 VERSN REVDAT 2 01-APR-03 1BJC 1 JRNL REVDAT 1 18-NOV-98 1BJC 0
JRNL AUTH S.-A.POULSEN,A.A.WATSON,D.J.CRAIK JRNL TITL SOLUTION STRUCTURES IN AQUEOUS SDS MICELLES OF TWO JRNL TITL 2 AMYLOID BETA PEPTIDES OF A BETA(1-28) MUTATED AT JRNL TITL 3 THE ALPHA-SECRETASE CLEAVAGE SITE (K16E, K16F) JRNL REF J.STRUCT.BIOL. V. 130 142 2000 JRNL REFN ISSN 1047-8477 JRNL PMID 10940222 JRNL DOI 10.1006/JSBI.2000.4267
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XPLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN REMARK 3 JOURNAL CITATION ABOVE
REMARK 4 REMARK 4 1BJC COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 5.8 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : SDS MICELLES (100MM)/D2O, H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY, TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 750 MHZ REMARK 210 SPECTROMETER MODEL : AMX-500, DRX-750 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR REMARK 210 METHOD USED : SIMULATED ANNEALING USING NOE REMARK 210 DISTANCE CONSTRAINTS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOW ENERGY, LOW VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED FROM 2-DIMENSIONAL NMR REMARK 210 DATA ON UNLABELLED PEPTIDE
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 2 60.70 60.07 REMARK 500 1 GLU A 3 35.88 -81.31 REMARK 500 1 PHE A 4 13.12 -154.98 REMARK 500 1 ARG A 5 71.95 -68.31 REMARK 500 1 HIS A 6 -21.00 -177.47 REMARK 500 1 GLU A 11 104.69 -172.26 REMARK 500 1 PHE A 16 -50.39 -132.86 REMARK 500 1 SER A 26 32.77 -88.06 REMARK 500 2 GLU A 3 32.60 -96.51 REMARK 500 2 PHE A 4 62.91 -152.02 REMARK 500 2 ARG A 5 33.16 -164.08 REMARK 500 2 HIS A 6 17.43 51.16 REMARK 500 2 SER A 8 17.06 55.82 REMARK 500 2 TYR A 10 -175.12 -65.62 REMARK 500 2 GLU A 11 113.13 -174.00 REMARK 500 2 HIS A 13 -18.56 67.86 REMARK 500 3 GLU A 3 26.40 -165.83 REMARK 500 3 PHE A 4 34.46 -81.79 REMARK 500 3 HIS A 6 11.97 51.26 REMARK 500 3 TYR A 10 -165.13 -70.71 REMARK 500 3 GLU A 11 115.58 -172.47 REMARK 500 3 HIS A 13 -51.64 -178.15 REMARK 500 3 ALA A 21 -7.71 -55.98 REMARK 500 3 ASP A 23 -34.76 -142.03 REMARK 500 3 SER A 26 14.15 56.54 REMARK 500 4 ARG A 5 49.56 -101.34 REMARK 500 4 GLU A 11 100.17 -171.33 REMARK 500 4 HIS A 13 26.78 44.10 REMARK 500 4 HIS A 14 42.54 36.89 REMARK 500 4 GLN A 15 13.45 -69.74 REMARK 500 4 ASP A 23 32.67 -145.07 REMARK 500 4 VAL A 24 -32.85 -136.30 REMARK 500 4 SER A 26 -42.32 -167.18 REMARK 500 5 PHE A 4 62.14 -107.02 REMARK 500 5 ARG A 5 45.75 -150.52 REMARK 500 5 GLU A 11 122.50 173.82 REMARK 500 5 HIS A 13 -2.37 -169.26 REMARK 500 5 GLN A 15 8.33 -160.15 REMARK 500 5 SER A 26 -39.70 -163.79 REMARK 500 5 ASN A 27 43.79 -87.90 REMARK 500 6 ALA A 2 70.31 -153.37 REMARK 500 6 PHE A 4 29.09 -148.66 REMARK 500 6 HIS A 6 51.84 73.73 REMARK 500 6 GLU A 11 104.84 -170.37 REMARK 500 6 HIS A 13 -59.34 -179.33 REMARK 500 6 HIS A 14 -111.49 -170.47 REMARK 500 6 LEU A 17 -27.67 86.00 REMARK 500 6 GLU A 22 -43.34 -141.83 REMARK 500 7 ALA A 2 -166.46 -77.64 REMARK 500 7 GLU A 11 103.56 -172.17 REMARK 500 7 GLN A 15 26.76 -163.02 REMARK 500 7 ALA A 21 13.02 -66.58 REMARK 500 7 ASP A 23 -37.24 -131.70 REMARK 500 7 SER A 26 70.81 -155.01 REMARK 500 7 ASN A 27 -2.49 -141.67 REMARK 500 8 ALA A 2 72.53 56.04 REMARK 500 8 GLU A 3 45.58 -85.40 REMARK 500 8 PHE A 4 18.33 -165.75 REMARK 500 8 HIS A 6 76.07 65.96 REMARK 500 8 ASP A 7 30.55 -82.81 REMARK 500 8 GLU A 11 106.85 -163.75 REMARK 500 8 HIS A 13 -22.36 -174.24 REMARK 500 8 ASP A 23 30.71 -148.79 REMARK 500 8 VAL A 24 -31.41 -132.27 REMARK 500 9 HIS A 6 -64.53 -165.15 REMARK 500 9 TYR A 10 157.74 61.94 REMARK 500 9 GLU A 11 127.82 -176.84 REMARK 500 9 VAL A 12 -34.10 -131.04 REMARK 500 9 HIS A 13 -53.75 77.95 REMARK 500 9 GLN A 15 51.57 -166.48 REMARK 500 9 PHE A 16 -55.04 -133.35 REMARK 500 10 ARG A 5 24.18 45.22 REMARK 500 10 HIS A 6 9.30 -173.72 REMARK 500 10 SER A 8 20.03 44.60 REMARK 500 10 GLU A 11 127.04 -175.25 REMARK 500 10 VAL A 12 -64.60 -97.11 REMARK 500 10 HIS A 13 6.35 54.64 REMARK 500 10 HIS A 14 -83.20 -78.04 REMARK 500 10 VAL A 24 -51.40 -123.44 REMARK 500 10 ASN A 27 6.34 58.30 REMARK 500 11 GLU A 3 23.00 -78.72 REMARK 500 11 PHE A 4 20.88 -143.21 REMARK 500 11 GLU A 11 103.28 -164.63 REMARK 500 11 HIS A 13 -51.16 78.34 REMARK 500 11 HIS A 14 -153.39 -82.92 REMARK 500 11 LEU A 17 -27.99 86.62 REMARK 500 11 ASN A 27 -32.34 -138.85 REMARK 500 12 ALA A 2 57.18 -105.99 REMARK 500 12 ARG A 5 6.32 -166.57 REMARK 500 12 ASP A 7 23.78 -155.60 REMARK 500 12 TYR A 10 -149.14 39.08 REMARK 500 12 HIS A 13 -33.60 78.51 REMARK 500 12 GLN A 15 33.85 -77.00 REMARK 500 12 VAL A 24 -44.20 -131.79 REMARK 500 12 SER A 26 -33.68 -157.13 REMARK 500 12 ASN A 27 41.36 -140.88 REMARK 500 13 ALA A 2 52.84 -160.35 REMARK 500 13 GLU A 3 34.76 -88.38 REMARK 500 13 GLU A 11 112.74 -174.43 REMARK 500 13 HIS A 13 -2.29 69.39 REMARK 500 13 HIS A 14 69.71 26.08 REMARK 500 13 ASP A 23 27.80 -145.48 REMARK 500 13 SER A 26 69.27 -163.97 REMARK 500 14 ALA A 2 74.03 51.00 REMARK 500 14 ARG A 5 25.18 -157.21 REMARK 500 14 HIS A 6 -50.35 -133.81 REMARK 500 14 TYR A 10 166.05 179.28 REMARK 500 14 VAL A 12 -58.01 -121.89 REMARK 500 14 HIS A 13 -49.84 75.13 REMARK 500 14 PHE A 19 2.72 -65.19 REMARK 500 14 ALA A 21 -33.42 -147.32 REMARK 500 14 SER A 26 14.52 59.13 REMARK 500 15 ALA A 2 69.25 -167.24 REMARK 500 15 GLU A 3 31.48 -82.64 REMARK 500 15 ARG A 5 22.25 -153.13 REMARK 500 15 HIS A 6 -47.40 -178.32 REMARK 500 15 TYR A 10 -173.00 48.06 REMARK 500 15 GLU A 11 83.43 -158.41 REMARK 500 15 GLN A 15 24.24 49.47 REMARK 500 15 VAL A 24 -33.17 -139.65 REMARK 500 15 SER A 26 7.68 -150.97 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1BJC A 1 28 UNP P05067 A4_HUMAN 672 699
SEQADV 1BJC PHE A 16 UNP P05067 LYS 687 ENGINEERED
SEQRES 1 A 28 ASP ALA GLU PHE ARG HIS ASP SER GLY TYR GLU VAL HIS SEQRES 2 A 28 HIS GLN PHE LEU VAL PHE PHE ALA GLU ASP VAL GLY SER SEQRES 3 A 28 ASN LYS
HELIX 1 1 LEU A 17 VAL A 24 1 8
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000