10 20 30 40 50 60 70 80 1BGN - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 29-MAY-98 1BGN
TITLE P-HYDROXYBENZOATE HYDROXYLASE (PHBH) MUTANT WITH CYS 116 REPLACED BY TITLE 2 SER (C116S) AND ARG 269 REPLACED BY THR (R269T), IN COMPLEX WITH FAD TITLE 3 AND 4-HYDROXYBENZOIC ACID
COMPND MOL_ID: 1; COMPND 2 MOLECULE: P-HYDROXYBENZOATE HYDROXYLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.14.13.2; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS; SOURCE 3 ORGANISM_TAXID: 294; SOURCE 4 GENE: POBA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: TG2; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: LACZ; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PUC9; SOURCE 11 EXPRESSION_SYSTEM_GENE: POBA
KEYWDS OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR M.H.M.EPPINK,H.A.SCHREUDER,W.J.H.VAN BERKEL
REVDAT 3 13-JUL-11 1BGN 1 VERSN REVDAT 2 24-FEB-09 1BGN 1 VERSN REVDAT 1 12-AUG-98 1BGN 0
JRNL AUTH M.H.EPPINK,H.A.SCHREUDER,W.J.VAN BERKEL JRNL TITL INTERDOMAIN BINDING OF NADPH IN P-HYDROXYBENZOATE JRNL TITL 2 HYDROXYLASE AS SUGGESTED BY KINETIC, CRYSTALLOGRAPHIC AND JRNL TITL 3 MODELING STUDIES OF HISTIDINE 162 AND ARGININE 269 VARIANTS. JRNL REF J.BIOL.CHEM. V. 273 21031 1998 JRNL REFN ISSN 0021-9258 JRNL PMID 9694855 JRNL DOI 10.1074/JBC.273.33.21031
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.H.EPPINK,H.A.SCHREUDER,W.J.VAN BERKEL REMARK 1 TITL LYS42 AND SER42 VARIANTS OF P-HYDROXYBENZOATE HYDROXYLASE REMARK 1 TITL 2 FROM PSEUDOMONAS FLUORESCENS REVEAL THAT ARG42 IS ESSENTIAL REMARK 1 TITL 3 FOR NADPH BINDING REMARK 1 REF EUR.J.BIOCHEM. V. 253 194 1998 REMARK 1 REFN ISSN 0014-2956 REMARK 1 REFERENCE 2 REMARK 1 AUTH W.J.VAN BERKEL,M.H.EPPINK,H.A.SCHREUDER REMARK 1 TITL CRYSTAL STRUCTURE OF P-HYDROXYBENZOATE HYDROXYLASE REMARK 1 TITL 2 RECONSTITUTED WITH THE MODIFIED FAD PRESENT IN ALCOHOL REMARK 1 TITL 3 OXIDASE FROM METHYLOTROPHIC YEASTS: EVIDENCE FOR AN REMARK 1 TITL 4 ARABINOFLAVIN REMARK 1 REF PROTEIN SCI. V. 3 2245 1994 REMARK 1 REFN ISSN 0961-8368 REMARK 1 REFERENCE 3 REMARK 1 AUTH H.A.SCHREUDER,A.MATTEVI,G.OBMOLOVA,K.H.KALK,W.G.HOL, REMARK 1 AUTH 2 F.J.VAN DER BOLT,W.J.VAN BERKEL REMARK 1 TITL CRYSTAL STRUCTURES OF WILD-TYPE P-HYDROXYBENZOATE REMARK 1 TITL 2 HYDROXYLASE COMPLEXED WITH 4-AMINOBENZOATE, REMARK 1 TITL 3 2,4-DIHYDROXYBENZOATE, AND 2-HYDROXY-4-AMINOBENZOATE AND OF REMARK 1 TITL 4 THE TYR222ALA MUTANT COMPLEXED WITH REMARK 1 TITL 5 2-HYDROXY-4-AMINOBENZOATE. EVIDENCE FOR A PROTON CHANNEL AND REMARK 1 TITL 6 A NEW BINDING MODE OF THE FLAVIN RING REMARK 1 REF BIOCHEMISTRY V. 33 10161 1994 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 4 REMARK 1 AUTH H.A.SCHREUDER,J.M.VAN DER LAAN,M.B.SWARTE,K.H.KALK,W.G.HOL, REMARK 1 AUTH 2 J.DRENTH REMARK 1 TITL CRYSTAL STRUCTURE OF THE REDUCED FORM OF P-HYDROXYBENZOATE REMARK 1 TITL 2 HYDROXYLASE REFINED AT 2.3 A RESOLUTION REMARK 1 REF PROTEINS V. 14 178 1992 REMARK 1 REFN ISSN 0887-3585 REMARK 1 REFERENCE 5 REMARK 1 AUTH K.ESCHRICH,W.J.VAN BERKEL,A.H.WESTPHAL,A.DE KOK,A.MATTEVI, REMARK 1 AUTH 2 G.OBMOLOVA,K.H.KALK,W.G.HOL REMARK 1 TITL ENGINEERING OF MICROHETEROGENEITY-RESISTANT REMARK 1 TITL 2 P-HYDROXYBENZOATE HYDROXYLASE FROM PSEUDOMONAS FLUORESCENS REMARK 1 REF FEBS LETT. V. 277 197 1990 REMARK 1 REFN ISSN 0014-5793 REMARK 1 REFERENCE 6 REMARK 1 AUTH H.A.SCHREUDER,P.A.PRICK,R.K.WIERENGA,G.VRIEND,K.S.WILSON, REMARK 1 AUTH 2 W.G.HOL,J.DRENTH REMARK 1 TITL CRYSTAL STRUCTURE OF THE P-HYDROXYBENZOATE REMARK 1 TITL 2 HYDROXYLASE-SUBSTRATE COMPLEX REFINED AT 1.9 A RESOLUTION. REMARK 1 TITL 3 ANALYSIS OF THE ENZYME-SUBSTRATE AND ENZYME-PRODUCT REMARK 1 TITL 4 COMPLEXES REMARK 1 REF J.MOL.BIOL. V. 208 679 1989 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 7 REMARK 1 AUTH J.M.VAN DER LAAN,H.A.SCHREUDER,M.B.SWARTE,R.K.WIERENGA, REMARK 1 AUTH 2 K.H.KALK,W.G.HOL,J.DRENTH REMARK 1 TITL THE COENZYME ANALOGUE ADENOSINE 5-DIPHOSPHORIBOSE DISPLACES REMARK 1 TITL 2 FAD IN THE ACTIVE SITE OF P-HYDROXYBENZOATE HYDROXYLASE. AN REMARK 1 TITL 3 X-RAY CRYSTALLOGRAPHIC INVESTIGATION REMARK 1 REF BIOCHEMISTRY V. 28 7199 1989 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 8 REMARK 1 AUTH H.A.SCHREUDER,J.M.VAN DER LAAN,W.G.HOL,J.DRENTH REMARK 1 TITL CRYSTAL STRUCTURE OF P-HYDROXYBENZOATE HYDROXYLASE COMPLEXED REMARK 1 TITL 2 WITH ITS REACTION PRODUCT 3,4-DIHYDROXYBENZOATE REMARK 1 REF J.MOL.BIOL. V. 199 637 1988 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 9 REMARK 1 AUTH R.K.WIERENGA,R.J.DE JONG,K.H.KALK,W.G.HOL,J.DRENTH REMARK 1 TITL CRYSTAL STRUCTURE OF P-HYDROXYBENZOATE HYDROXYLASE REMARK 1 REF J.MOL.BIOL. V. 131 55 1979 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 10 REMARK 1 AUTH J.DRENTH,W.G.HOL,R.K.WIERENGA REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY INVESTIGATION OF REMARK 1 TITL 2 P-HYDROXYBENZOATE HYDROXYLASE FROM PSEUDOMONAS FLUORESCENS REMARK 1 REF J.BIOL.CHEM. V. 250 5268 1975 REMARK 1 REFN ISSN 0021-9258
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 26122 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3094 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 279 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.79800 REMARK 3 B22 (A**2) : -1.84900 REMARK 3 B33 (A**2) : 0.98300 REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.50 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.71 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : FAD.PAR REMARK 3 PARAMETER FILE 3 : WAT.PAR REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : FAD.TOP REMARK 3 TOPOLOGY FILE 3 : PHB.TOP REMARK 3 TOPOLOGY FILE 4 : WAT.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1BGN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : DEC-95 REMARK 200 TEMPERATURE (KELVIN) : 280 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : MACSCIENCE M18XH REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE(002) REMARK 200 OPTICS : COLLIMATOR REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : SIEMENS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26122 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 8.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : 0.06700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: PDB ENTRY 1PBE REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 39% AMMONIUMSULFATE, 100 MM SODIUM REMARK 280 PHOSPHATE, 0.04 MM FAD, 0.15 MM EDTA, 30 MM SODIUM SULFITE, 1 MM REMARK 280 P-HYDROXYBENZOATE, PH 7.0
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.40000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.40000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 73.15000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 73.15000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.40000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 73.15000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.40000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 73.15000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 6340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 146.30000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 88.80000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 392 REMARK 465 ILE A 393 REMARK 465 GLU A 394
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 44 -131.32 49.49 REMARK 500 PRO A 182 29.07 -78.71 REMARK 500 PRO A 275 -169.54 -79.83 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 615 DISTANCE = 5.24 ANGSTROMS
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 395 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PHB A 396
DBREF 1BGN A 1 394 UNP P00438 PHHY_PSEFL 1 394
SEQADV 1BGN SER A 116 UNP P00438 CYS 116 ENGINEERED SEQADV 1BGN THR A 269 UNP P00438 ARG 269 ENGINEERED
SEQRES 1 A 394 MET LYS THR GLN VAL ALA ILE ILE GLY ALA GLY PRO SER SEQRES 2 A 394 GLY LEU LEU LEU GLY GLN LEU LEU HIS LYS ALA GLY ILE SEQRES 3 A 394 ASP ASN VAL ILE LEU GLU ARG GLN THR PRO ASP TYR VAL SEQRES 4 A 394 LEU GLY ARG ILE ARG ALA GLY VAL LEU GLU GLN GLY MET SEQRES 5 A 394 VAL ASP LEU LEU ARG GLU ALA GLY VAL ASP ARG ARG MET SEQRES 6 A 394 ALA ARG ASP GLY LEU VAL HIS GLU GLY VAL GLU ILE ALA SEQRES 7 A 394 PHE ALA GLY GLN ARG ARG ARG ILE ASP LEU LYS ARG LEU SEQRES 8 A 394 SER GLY GLY LYS THR VAL THR VAL TYR GLY GLN THR GLU SEQRES 9 A 394 VAL THR ARG ASP LEU MET GLU ALA ARG GLU ALA SER GLY SEQRES 10 A 394 ALA THR THR VAL TYR GLN ALA ALA GLU VAL ARG LEU HIS SEQRES 11 A 394 ASP LEU GLN GLY GLU ARG PRO TYR VAL THR PHE GLU ARG SEQRES 12 A 394 ASP GLY GLU ARG LEU ARG LEU ASP CYS ASP TYR ILE ALA SEQRES 13 A 394 GLY CYS ASP GLY PHE HIS GLY ILE SER ARG GLN SER ILE SEQRES 14 A 394 PRO ALA GLU ARG LEU LYS VAL PHE GLU ARG VAL TYR PRO SEQRES 15 A 394 PHE GLY TRP LEU GLY LEU LEU ALA ASP THR PRO PRO VAL SEQRES 16 A 394 SER HIS GLU LEU ILE TYR ALA ASN HIS PRO ARG GLY PHE SEQRES 17 A 394 ALA LEU CYS SER GLN ARG SER ALA THR ARG SER ARG TYR SEQRES 18 A 394 TYR VAL GLN VAL PRO LEU THR GLU LYS VAL GLU ASP TRP SEQRES 19 A 394 SER ASP GLU ARG PHE TRP THR GLU LEU LYS ALA ARG LEU SEQRES 20 A 394 PRO ALA GLU VAL ALA GLU LYS LEU VAL THR GLY PRO SER SEQRES 21 A 394 LEU GLU LYS SER ILE ALA PRO LEU THR SER PHE VAL VAL SEQRES 22 A 394 GLU PRO MET GLN HIS GLY ARG LEU PHE LEU ALA GLY ASP SEQRES 23 A 394 ALA ALA HIS ILE VAL PRO PRO THR GLY ALA LYS GLY LEU SEQRES 24 A 394 ASN LEU ALA ALA SER ASP VAL SER THR LEU TYR ARG LEU SEQRES 25 A 394 LEU LEU LYS ALA TYR ARG GLU GLY ARG GLY GLU LEU LEU SEQRES 26 A 394 GLU ARG TYR SER ALA ILE CYS LEU ARG ARG ILE TRP LYS SEQRES 27 A 394 ALA GLU ARG PHE SER TRP TRP MET THR SER VAL LEU HIS SEQRES 28 A 394 ARG PHE PRO ASP THR ASP ALA PHE SER GLN ARG ILE GLN SEQRES 29 A 394 GLN THR GLU LEU GLU TYR TYR LEU GLY SER GLU ALA GLY SEQRES 30 A 394 LEU ALA THR ILE ALA GLU ASN TYR VAL GLY LEU PRO TYR SEQRES 31 A 394 GLU GLU ILE GLU
HET FAD A 395 53 HET PHB A 396 10
HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM PHB P-HYDROXYBENZOIC ACID
FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 PHB C7 H6 O3 FORMUL 4 HOH *279(H2 O)
HELIX 1 H1 PRO A 12 LYS A 23 1 12 HELIX 2 H2 PRO A 36 LEU A 40 1 5 HELIX 3 H3 GLN A 50 GLU A 58 1 9 HELIX 4 H4 ARG A 63 ASP A 68 1 6 HELIX 5 H5 LEU A 88 LEU A 91 1 4 HELIX 6 H6 GLN A 102 SER A 116 1 15 HELIX 7 H7 ILE A 164 GLN A 167 1 4 HELIX 8 H7A ALA A 171 ARG A 173 5 3 HELIX 9 H7B VAL A 231 ASP A 233 5 3 HELIX 10 H8 ASP A 236 ARG A 246 1 11 HELIX 11 H9 ALA A 249 LYS A 254 1 6 HELIX 12 H9A GLY A 285 ALA A 287 5 3 HELIX 13 H9B PRO A 293 GLY A 295 5 3 HELIX 14 H10 GLY A 298 ARG A 318 1 21 HELIX 15 HH1 GLY A 322 ARG A 327 5 6 HELIX 16 H11 TYR A 328 LEU A 350 1 23 HELIX 17 H12 ALA A 358 TYR A 371 1 14 HELIX 18 H13 GLU A 375 VAL A 386 1 12
SHEET 1 A 6 THR A 119 VAL A 121 0 SHEET 2 A 6 ASN A 28 LEU A 31 1 O ILE A 30 N VAL A 121 SHEET 3 A 6 VAL A 5 ILE A 8 1 O ILE A 7 N LEU A 31 SHEET 4 A 6 TYR A 154 GLY A 157 1 O ALA A 156 N ILE A 8 SHEET 5 A 6 LEU A 281 LEU A 283 1 O PHE A 282 N GLY A 157 SHEET 6 A 6 GLN A 277 HIS A 278 -1 O HIS A 278 N LEU A 281 SHEET 1 B 7 GLN A 82 ASP A 87 0 SHEET 2 B 7 GLY A 74 PHE A 79 -1 O VAL A 75 N ILE A 86 SHEET 3 B 7 ILE A 200 ASN A 203 1 N TYR A 201 O GLU A 76 SHEET 4 B 7 ALA A 209 SER A 215 -1 N CYS A 211 O ILE A 200 SHEET 5 B 7 ARG A 218 VAL A 225 -1 N TYR A 222 O LEU A 210 SHEET 6 B 7 PHE A 183 ALA A 190 -1 N LEU A 188 O TYR A 221 SHEET 7 B 7 SER A 260 PRO A 267 -1 N LEU A 261 O LEU A 189 SHEET 1 C 4 LYS A 2 THR A 3 0 SHEET 2 C 4 GLU A 146 ASP A 151 1 O ASP A 151 N THR A 3 SHEET 3 C 4 TYR A 138 ARG A 143 -1 O PHE A 141 N LEU A 148 SHEET 4 C 4 ALA A 125 HIS A 130 -1 O ARG A 128 N THR A 140 SHEET 1 D 3 LYS A 175 PRO A 182 0 SHEET 2 D 3 LEU A 268 GLU A 274 -1 N SER A 270 O ARG A 179 SHEET 3 D 3 HIS A 289 ILE A 290 -1 N ILE A 290 O PHE A 271 SHEET 1 E 3 VAL A 47 GLU A 49 0 SHEET 2 E 3 VAL A 97 VAL A 99 -1 O THR A 98 N LEU A 48 SHEET 3 E 3 LEU A 70 HIS A 72 -1 O LEU A 70 N VAL A 99
CISPEP 1 GLU A 274 PRO A 275 0 -1.16
SITE 1 AC1 34 ILE A 8 GLY A 9 GLY A 11 PRO A 12 SITE 2 AC1 34 SER A 13 LEU A 31 GLU A 32 ARG A 33 SITE 3 AC1 34 GLN A 34 ARG A 42 ARG A 44 ALA A 45 SITE 4 AC1 34 GLY A 46 VAL A 47 GLN A 102 VAL A 127 SITE 5 AC1 34 CYS A 158 ASP A 159 GLY A 160 GLY A 285 SITE 6 AC1 34 ASP A 286 ALA A 296 LYS A 297 GLY A 298 SITE 7 AC1 34 LEU A 299 ASN A 300 PHB A 396 HOH A 400 SITE 8 AC1 34 HOH A 402 HOH A 412 HOH A 516 HOH A 518 SITE 9 AC1 34 HOH A 524 HOH A 529 SITE 1 AC2 11 ARG A 44 VAL A 47 TRP A 185 TYR A 201 SITE 2 AC2 11 SER A 212 ARG A 214 TYR A 222 PRO A 293 SITE 3 AC2 11 THR A 294 ALA A 296 FAD A 395
CRYST1 72.000 146.300 88.800 90.00 90.00 90.00 C 2 2 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.013889 0.000000 0.000000 0.00000
SCALE2 0.000000 0.006835 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011261 0.00000