10 20 30 40 50 60 70 80 1B9P - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric Unit
HEADER COLLAGEN FACIT XIV 15-FEB-99 1B9P
TITLE NMR STRUCTURE OF HEPARIN BINDING SITE OF NON COLLAGENOUS TITLE 2 DOMAIN I (NC1) OF COLLAGEN FACIT XIV
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (COLLAGEN ALPHA 1); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FRAGMENT 84-116 OF NC1 (HEPARIN BINDING SITE); COMPND 5 SYNONYM: ALPHA 1 TYPE XIV COLLAGEN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE PROTEIN WAS CHEMICALLY SYNTHESIZED. THE SOURCE 4 SEQUENCE OF THIS PROTEIN IS NATURALLY FOUND SOURCE 5 EXTRACELLULARLY IN THE EMBRYO OF GALLUS GALLUS (CHICKEN).
KEYWDS COLLAGEN FACIT XIV, HEPARIN-BINDING SITE, NC1
EXPDTA SOLUTION NMR
AUTHOR R.MONTSERRET,G.DELEAGE,F.PENIN
REVDAT 4 24-FEB-09 1B9P 1 VERSN REVDAT 3 01-APR-03 1B9P 1 JRNL REVDAT 2 18-JUN-99 1B9P 1 JRNL REVDAT 1 25-FEB-99 1B9P 0
JRNL AUTH R.MONTSERRET,E.AUBERT-FOUCHER,M.J.MCLEISH,J.M.HILL, JRNL AUTH 2 D.FICHEUX,M.JAQUINOD,M.VAN DER REST,G.DELEAGE, JRNL AUTH 3 F.PENIN JRNL TITL STRUCTURAL ANALYSIS OF THE HEPARIN-BINDING SITE OF JRNL TITL 2 THE NC1 DOMAIN OF COLLAGEN XIV BY CD AND NMR. JRNL REF BIOCHEMISTRY V. 38 6479 1999 JRNL REFN ISSN 0006-2960 JRNL PMID 10350466 JRNL DOI 10.1021/BI9900222
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.GIRY-LOZINGUEZ,E.AUBERT-FOUCHER,F.PENIN, REMARK 1 AUTH 2 G.DELEAGE,B.DUBLET,M.VAN DER REST REMARK 1 TITL IDENTIFICATION AND CHARACTERIZATION OF A HEPARIN REMARK 1 TITL 2 BINDING SITE WITHIN THE NC1 DOMAIN OF CHICKEN REMARK 1 TITL 3 COLLAGEN XIV REMARK 1 REF MATRIX BIOL. V. 17 145 1998 REMARK 1 REFN ISSN 0945-053X REMARK 1 DOI 10.1016/S0945-053X(98)90027-0
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1B9P COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-99. REMARK 100 THE RCSB ID CODE IS RCSB000486.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY, TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : UNITY PLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NO RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: AVERAGED STRUCTURE
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 3 67.20 -115.02 REMARK 500 ARG A 6 -69.58 -153.04 REMARK 500 SER A 7 87.84 31.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 6 0.31 SIDE_CHAIN REMARK 500 ARG A 12 0.30 SIDE_CHAIN REMARK 500 ARG A 14 0.31 SIDE_CHAIN REMARK 500 ARG A 15 0.32 SIDE_CHAIN REMARK 500 ARG A 20 0.32 SIDE_CHAIN REMARK 500 ARG A 29 0.27 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
DBREF 1B9P A 1 34 UNP P32018 COEA1_CHICK 1852 1885
SEQADV 1B9P CYS A 1 UNP P32018 GLU 1852 ENGINEERED MUTATION
SEQRES 1 A 34 CYS ALA VAL GLU LEU ARG SER PRO GLY ILE SER ARG PHE SEQRES 2 A 34 ARG ARG LYS ILE ALA LYS ARG SER ILE LYS THR LEU GLU SEQRES 3 A 34 HIS LYS ARG GLU ASN ALA LYS GLU
HELIX 1 1 SER A 11 ARG A 29 1 19
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000