10 20 30 40 50 60 70 80 1B2T - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER CHEMOKINE 01-DEC-98 1B2T
TITLE SOLUTION STRUCTURE OF THE CX3C CHEMOKINE DOMAIN OF TITLE 2 FRACTALKINE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (FRACTALKINE); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CHEMOKINE DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: DISULFIDE BETWEEN 8 AND 34 AND 12 AND 50
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 9 EXPRESSION_SYSTEM_CELLULAR_LOCATION: CYTOPLASM
KEYWDS CHEMOKINE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.M.HANDEL,L.S.MIZOUE,J.F.BAZAN,E.C.JOHNSON
REVDAT 4 24-FEB-09 1B2T 1 VERSN REVDAT 3 18-APR-01 1B2T 1 REVDAT SOURCE REMARK REVDAT 2 08-APR-99 1B2T 3 ATOM REVDAT 1 08-APR-99 1B2T 0
JRNL AUTH L.S.MIZOUE,J.F.BAZAN,E.C.JOHNSON,T.M.HANDEL JRNL TITL SOLUTION STRUCTURE AND DYNAMICS OF THE CX3C JRNL TITL 2 CHEMOKINE DOMAIN OF FRACTALKINE AND ITS JRNL TITL 3 INTERACTION WITH AN N-TERMINAL FRAGMENT OF CX3CR1. JRNL REF BIOCHEMISTRY V. 38 1402 1999 JRNL REFN ISSN 0006-2960 JRNL PMID 9931005 JRNL DOI 10.1021/BI9820614
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN REMARK 3 THE JOURNAL CITATION ABOVE
REMARK 4 REMARK 4 1B2T COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-DEC-98. REMARK 100 THE RCSB ID CODE IS RCSB000185.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295.5 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 15N-EDITED, 3D 13C-EDITED, REMARK 210 4D 13C/13C-EDITED NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX600 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS REMARK 210 -SIMULATED ANNEALING COUPLED REMARK 210 WITH THE AMBIGUOUS RESTRAINTS REMARK 210 FOR ITERATIVE ASSIGNMENT REMARK 210 (ARIA) EXTENSION OF NILGES REMARK 210 (M.NILGES, J. MOL. BIOL. 245, REMARK 210 645-660, 1995). REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 70 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 20 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY ON 13C, 15N-LABELED PROTEIN.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 2 -53.63 -157.83 REMARK 500 1 VAL A 5 52.50 -117.62 REMARK 500 1 THR A 6 -163.59 -121.65 REMARK 500 1 LYS A 7 101.90 170.90 REMARK 500 1 CYS A 8 131.82 63.81 REMARK 500 1 GLN A 28 -169.12 -101.10 REMARK 500 1 CYS A 34 -79.85 -109.58 REMARK 500 1 ARG A 37 88.91 -64.18 REMARK 500 1 ALA A 38 -152.61 -126.94 REMARK 500 1 ALA A 71 169.57 -48.43 REMARK 500 1 LEU A 72 -77.33 58.49 REMARK 500 1 ARG A 74 47.69 -86.93 REMARK 500 2 GLN A 1 40.90 36.22 REMARK 500 2 HIS A 2 -63.39 -145.42 REMARK 500 2 HIS A 3 56.16 179.73 REMARK 500 2 VAL A 5 53.09 -113.53 REMARK 500 2 THR A 6 -162.40 -124.06 REMARK 500 2 LYS A 7 45.34 176.96 REMARK 500 2 THR A 16 -168.75 -110.95 REMARK 500 2 ALA A 32 81.67 -55.58 REMARK 500 2 SER A 33 -41.11 176.30 REMARK 500 2 ARG A 37 85.71 -66.23 REMARK 500 2 ALA A 38 -157.19 -124.23 REMARK 500 2 HIS A 46 35.96 86.21 REMARK 500 2 GLN A 68 -80.28 -162.52 REMARK 500 2 LEU A 72 -78.06 -113.49 REMARK 500 3 GLN A 1 -157.08 57.87 REMARK 500 3 HIS A 2 95.55 -43.68 REMARK 500 3 HIS A 3 -46.89 173.34 REMARK 500 3 ASN A 9 -34.26 -34.38 REMARK 500 3 GLN A 28 -166.61 -120.62 REMARK 500 3 ALA A 32 84.91 -67.15 REMARK 500 3 SER A 33 -35.08 -173.51 REMARK 500 3 ARG A 37 85.38 -69.83 REMARK 500 3 ALA A 38 -166.06 -114.20 REMARK 500 3 GLN A 68 -69.91 -127.13 REMARK 500 3 ALA A 71 -176.64 -48.48 REMARK 500 3 LEU A 72 -83.60 54.00 REMARK 500 3 ARG A 74 -90.26 -36.36 REMARK 500 4 VAL A 5 78.27 -109.87 REMARK 500 4 LYS A 7 91.69 67.60 REMARK 500 4 CYS A 8 110.96 72.24 REMARK 500 4 ASN A 9 -34.96 -34.24 REMARK 500 4 SER A 13 88.44 -59.22 REMARK 500 4 LYS A 14 150.35 85.70 REMARK 500 4 THR A 16 -168.06 -75.78 REMARK 500 4 ALA A 32 82.99 -65.45 REMARK 500 4 SER A 33 -24.77 163.64 REMARK 500 4 ALA A 38 -167.17 -113.24 REMARK 500 4 ARG A 67 46.15 -87.67 REMARK 500 4 GLN A 68 -65.79 -142.76 REMARK 500 4 THR A 73 81.32 -174.61 REMARK 500 5 HIS A 2 -158.28 172.11 REMARK 500 5 HIS A 3 -76.97 -33.08 REMARK 500 5 VAL A 5 53.68 -109.31 REMARK 500 5 LYS A 7 43.39 171.25 REMARK 500 5 CYS A 12 59.10 -90.77 REMARK 500 5 THR A 16 -169.47 -73.54 REMARK 500 5 ASN A 30 129.81 -36.92 REMARK 500 5 GLN A 31 152.04 -49.17 REMARK 500 5 SER A 33 42.09 159.43 REMARK 500 5 CYS A 34 -74.87 -116.16 REMARK 500 5 ARG A 74 -93.63 39.72 REMARK 500 6 GLN A 1 125.40 63.75 REMARK 500 6 THR A 6 -169.49 -106.09 REMARK 500 6 LYS A 7 49.42 175.96 REMARK 500 6 CYS A 12 82.61 -68.72 REMARK 500 6 ARG A 37 89.77 -62.07 REMARK 500 6 ALA A 38 -162.23 -123.58 REMARK 500 6 ARG A 67 51.27 -93.64 REMARK 500 6 GLN A 68 -55.14 -151.03 REMARK 500 6 ASN A 75 -59.64 -127.05 REMARK 500 7 GLN A 1 -80.73 -108.64 REMARK 500 7 HIS A 3 -34.67 -36.80 REMARK 500 7 ALA A 32 80.34 -59.72 REMARK 500 7 SER A 33 -33.07 174.77 REMARK 500 7 ARG A 37 86.18 -69.26 REMARK 500 7 ALA A 38 -157.93 -127.77 REMARK 500 7 GLN A 68 -74.66 -46.36 REMARK 500 7 THR A 73 -60.80 179.24 REMARK 500 7 ARG A 74 123.33 179.54 REMARK 500 8 GLN A 1 49.58 39.13 REMARK 500 8 HIS A 3 86.66 179.21 REMARK 500 8 LYS A 7 47.64 175.36 REMARK 500 8 CYS A 12 55.39 -91.50 REMARK 500 8 THR A 16 -168.62 -107.34 REMARK 500 8 CYS A 34 -157.32 -125.43 REMARK 500 8 LYS A 36 158.87 -49.57 REMARK 500 8 GLU A 55 129.98 -38.30 REMARK 500 8 ALA A 70 -45.35 -132.76 REMARK 500 8 ALA A 71 -93.54 -36.28 REMARK 500 8 ASN A 75 -66.32 -123.01 REMARK 500 9 HIS A 3 69.29 -159.03 REMARK 500 9 LYS A 7 47.40 -178.73 REMARK 500 9 CYS A 8 107.88 170.11 REMARK 500 9 CYS A 12 63.28 -69.78 REMARK 500 9 SER A 33 36.29 177.78 REMARK 500 9 CYS A 34 -89.99 -134.98 REMARK 500 9 ARG A 37 90.04 -61.32 REMARK 500 9 ALA A 38 -163.25 -127.83 REMARK 500 9 LEU A 72 -81.79 72.38 REMARK 500 9 ARG A 74 -83.18 161.47 REMARK 500 10 HIS A 3 -90.17 41.39 REMARK 500 10 LYS A 7 90.27 55.43 REMARK 500 10 CYS A 8 107.65 70.61 REMARK 500 10 CYS A 12 66.15 -100.39 REMARK 500 10 ARG A 37 86.34 -68.19 REMARK 500 10 ALA A 38 -160.51 -114.10 REMARK 500 10 ARG A 74 -84.79 -48.24 REMARK 500 11 GLN A 1 -154.39 74.18 REMARK 500 11 HIS A 3 83.15 40.57 REMARK 500 11 LYS A 7 105.03 176.45 REMARK 500 11 CYS A 8 120.41 84.12 REMARK 500 11 CYS A 12 64.08 -67.13 REMARK 500 11 ARG A 37 87.77 -65.11 REMARK 500 11 ALA A 38 -160.26 -123.20 REMARK 500 11 GLN A 68 -62.42 -129.61 REMARK 500 11 ALA A 71 26.85 -165.46 REMARK 500 11 LEU A 72 -79.34 68.26 REMARK 500 11 THR A 73 -91.86 -56.43 REMARK 500 11 ARG A 74 125.78 174.76 REMARK 500 12 GLN A 1 23.70 -157.90 REMARK 500 12 HIS A 2 -71.02 -102.35 REMARK 500 12 HIS A 3 -39.06 175.39 REMARK 500 12 LYS A 7 44.75 86.10 REMARK 500 12 CYS A 12 72.87 -105.28 REMARK 500 12 THR A 16 -166.40 -111.82 REMARK 500 12 ARG A 37 86.11 -67.53 REMARK 500 12 ALA A 38 -166.61 -123.21 REMARK 500 12 THR A 73 147.49 66.27 REMARK 500 13 HIS A 3 19.81 55.57 REMARK 500 13 THR A 6 -91.61 -127.99 REMARK 500 13 LYS A 7 44.92 85.55 REMARK 500 13 ASN A 9 -39.51 -35.10 REMARK 500 13 THR A 16 -167.98 -105.94 REMARK 500 13 ALA A 32 82.89 -60.15 REMARK 500 13 SER A 33 -30.17 174.03 REMARK 500 13 ARG A 37 89.27 -63.20 REMARK 500 13 ALA A 38 -162.00 -128.65 REMARK 500 13 ARG A 67 59.72 -92.35 REMARK 500 13 GLN A 68 -69.13 -144.11 REMARK 500 13 ARG A 74 94.51 -45.03 REMARK 500 14 HIS A 2 -50.30 170.81 REMARK 500 14 LYS A 7 43.15 177.37 REMARK 500 14 CYS A 12 76.22 -63.02 REMARK 500 14 ALA A 32 86.65 -57.09 REMARK 500 14 SER A 33 -25.51 163.31 REMARK 500 14 ARG A 37 87.82 -65.29 REMARK 500 14 ALA A 38 -164.67 -118.32 REMARK 500 14 LEU A 72 -70.54 -63.57 REMARK 500 15 HIS A 3 95.48 -69.20 REMARK 500 15 CYS A 8 96.94 -160.84 REMARK 500 15 ASN A 9 -34.20 -33.38 REMARK 500 15 CYS A 34 -153.43 -129.25 REMARK 500 15 ARG A 37 89.09 -63.64 REMARK 500 15 ALA A 38 -156.18 -114.42 REMARK 500 15 GLN A 45 40.48 -103.58 REMARK 500 15 LEU A 72 -70.26 -112.89 REMARK 500 16 HIS A 2 -76.07 -173.24 REMARK 500 16 LYS A 7 89.21 40.35 REMARK 500 16 CYS A 8 99.27 72.52 REMARK 500 16 ASN A 9 -34.89 -33.65 REMARK 500 16 LYS A 18 146.79 -39.16 REMARK 500 16 GLN A 28 -159.56 -141.82 REMARK 500 16 ASN A 30 167.91 -49.64 REMARK 500 16 CYS A 34 -162.42 -116.23 REMARK 500 16 ARG A 37 89.45 -63.15 REMARK 500 16 ALA A 38 -153.25 -112.99 REMARK 500 16 ARG A 67 30.49 -89.29 REMARK 500 16 GLN A 68 -64.24 -152.54 REMARK 500 16 ALA A 71 35.34 -165.08 REMARK 500 16 LEU A 72 -76.06 67.83 REMARK 500 16 THR A 73 100.97 -42.97 REMARK 500 17 GLN A 1 66.01 -113.94 REMARK 500 17 HIS A 2 -70.11 71.30 REMARK 500 17 LYS A 7 43.42 74.87 REMARK 500 17 CYS A 8 113.21 156.93 REMARK 500 17 LYS A 18 77.51 -65.70 REMARK 500 17 CYS A 34 -86.36 -104.63 REMARK 500 17 ARG A 74 -84.04 -71.76 REMARK 500 18 HIS A 2 -87.63 63.46 REMARK 500 18 ASN A 9 -33.41 -36.80 REMARK 500 18 ALA A 32 82.54 -68.39 REMARK 500 18 SER A 33 -48.77 -178.99 REMARK 500 18 ARG A 37 88.55 -65.20 REMARK 500 18 ALA A 38 -168.80 -128.23 REMARK 500 18 THR A 73 163.85 166.90 REMARK 500 19 LYS A 7 42.90 164.40 REMARK 500 19 THR A 16 -167.50 -110.58 REMARK 500 19 GLN A 28 -156.42 -147.69 REMARK 500 19 CYS A 34 -71.38 -119.79 REMARK 500 19 ARG A 37 78.59 -69.51 REMARK 500 19 ARG A 67 35.32 -94.49 REMARK 500 19 GLN A 68 -69.42 -143.71 REMARK 500 19 ASN A 75 -38.69 -130.81 REMARK 500 20 HIS A 2 96.56 171.93 REMARK 500 20 HIS A 3 -43.99 169.67 REMARK 500 20 LYS A 7 89.92 177.70 REMARK 500 20 CYS A 8 133.16 63.37 REMARK 500 20 ARG A 37 86.91 -65.10 REMARK 500 20 ALA A 38 -161.13 -119.56 REMARK 500 20 LYS A 54 -37.71 -39.36 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1B2T A 1 76 UNP P78423 X3CL1_HUMAN 25 100
SEQADV 1B2T MET A 0 UNP P78423 CLONING ARTIFACT
SEQRES 1 A 77 MET GLN HIS HIS GLY VAL THR LYS CYS ASN ILE THR CYS SEQRES 2 A 77 SER LYS MET THR SER LYS ILE PRO VAL ALA LEU LEU ILE SEQRES 3 A 77 HIS TYR GLN GLN ASN GLN ALA SER CYS GLY LYS ARG ALA SEQRES 4 A 77 ILE ILE LEU GLU THR ARG GLN HIS ARG LEU PHE CYS ALA SEQRES 5 A 77 ASP PRO LYS GLU GLN TRP VAL LYS ASP ALA MET GLN HIS SEQRES 6 A 77 LEU ASP ARG GLN ALA ALA ALA LEU THR ARG ASN GLY
HELIX 1 H1 PRO A 20 LEU A 23 51 TURN OF 3/10 4 HELIX 2 H2 GLN A 56 ARG A 67 1 12
SHEET 1 S1 1 LEU A 24 GLN A 29 0 SHEET 1 S2 1 ILE A 39 THR A 43 0 SHEET 1 S3 1 LEU A 48 ALA A 51 0
SSBOND 1 CYS A 8 CYS A 34 1555 1555 2.03 SSBOND 2 CYS A 12 CYS A 50 1555 1555 2.03
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000