10 20 30 40 50 60 70 80 1B29 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 18-NOV-98 1B29
TITLE GLUTAMYL TRNA REDUCTASE FROM HORDEUM VULGARE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (GLUTAMYL TRNA REDUCTASE); COMPND 3 CHAIN: A; COMPND 4 EC: 1.2.1.-
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HORDEUM VULGARE; SOURCE 3 ORGANISM_COMMON: BARLEY; SOURCE 4 ORGAN: LEAF; SOURCE 5 TISSUE: MESOPHYLL; SOURCE 6 ORGANELLE: CHLOROPLAST; SOURCE 7 CELLULAR_LOCATION: CHLOROPLAST
KEYWDS REDUCTASE
EXPDTA THEORETICAL MODEL
AUTHOR S.S.BRODY,S.GOUGH,G.KANNANGARA
REVDAT 4 01-APR-03 1B29 1 JRNL REVDAT 3 09-JUN-00 1B29 1 DBREF REVDAT 2 22-DEC-99 1B29 4 HEADER COMPND REMARK JRNL REVDAT 2 2 4 SOURCE SEQRES REVDAT 1 09-DEC-98 1B29 0
JRNL AUTH S.S.BRODY,S.P.GOUGH,C.G.KANNANGARA JRNL TITL PREDICTED STRUCTURE AND FOLD RECOGNITION FOR THE JRNL TITL 2 GLUTAMYL TRNA REDUCTASE FAMILY OF PROTEINS. JRNL REF PROTEINS V. 37 485 1999 JRNL REFN ASTM PSFGEY US ISSN 0887-3585
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1B29 COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-1999. REMARK 100 THE RCSB ID CODE IS RCSB008006.
REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: NULL
REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 72 CE2 TRP A 72 CD2 -0.080 REMARK 500 GLN A 123 C GLN A 123 O -0.082 REMARK 500 ARG A 140 C ARG A 140 O -0.086 REMARK 500 ARG A 321 C ARG A 321 O -0.105 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 139 N - CA - CB ANGL. DEV. =-15.9 DEGREES REMARK 500 LEU A 296 CD1 - CG - CD2 ANGL. DEV. =-15.1 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 10 -146.46 22.48 REMARK 500 HIS A 11 -129.00 161.65 REMARK 500 GLU A 16 -140.97 126.20 REMARK 500 ARG A 18 -88.99 52.24 REMARK 500 VAL A 69 -103.95 48.80 REMARK 500 ARG A 92 166.56 80.00 REMARK 500 ASP A 230 -107.78 58.37 REMARK 500 ALA A 316 -128.69 3.33 REMARK 500 GLU A 366 -33.80 82.11 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 91 ARG A 92 -129.23
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CYS REMARK 800 SITE_DESCRIPTION: REMARK 800 THIOESTER BINDING SITE
DBREF 1B29 A 1 385 UNP Q42843 HMA1_HORVU 76 460
SEQRES 1 A 385 SER SER ILE ALA VAL ILE GLY LEU SER VAL HIS THR ALA SEQRES 2 A 385 PRO VAL GLU MET ARG GLU LYS LEU ALA VAL ALA GLU GLU SEQRES 3 A 385 LEU TRP PRO ARG ALA ILE SER GLU LEU THR SER LEU ASN SEQRES 4 A 385 HIS ILE GLU GLU ALA ALA VAL LEU SER THR CYS ASN ARG SEQRES 5 A 385 MET GLU ILE TYR VAL VAL ALA LEU SER TRP ASN ARG GLY SEQRES 6 A 385 ILE ARG GLU VAL VAL ASP TRP MET SER LYS LYS SER GLY SEQRES 7 A 385 ILE PRO ALA SER GLU LEU ARG GLU HIS LEU PHE MET LEU SEQRES 8 A 385 ARG ASP SER ASP ALA THR ARG HIS LEU PHE GLU VAL SER SEQRES 9 A 385 ALA GLY LEU ASP SER LEU VAL LEU GLY GLU GLY GLN ILE SEQRES 10 A 385 LEU ALA GLN VAL LYS GLN VAL VAL ARG ASN GLY GLN ASN SEQRES 11 A 385 SER GLY GLY LEU GLY LYS ASN ILE ASP ARG MET PHE LYS SEQRES 12 A 385 ASP ALA ILE THR ALA GLY LYS ARG VAL ARG CYS GLU THR SEQRES 13 A 385 ASN ILE SER ALA GLY ALA VAL SER VAL SER SER ALA ALA SEQRES 14 A 385 VAL GLU LEU ALA MET MET LYS LEU PRO LYS SER GLU CYS SEQRES 15 A 385 LEU SER ALA ARG MET LEU LEU ILE GLY ALA GLY LYS MET SEQRES 16 A 385 GLY LYS LEU VAL VAL LYS HIS LEU ILE ALA LYS GLY CYS SEQRES 17 A 385 LYS LYS VAL VAL VAL VAL ASN ARG SER VAL GLU ARG VAL SEQRES 18 A 385 ASP ALA ILE ARG GLU GLU MET LYS ASP ILE GLU ILE VAL SEQRES 19 A 385 TYR ARG PRO LEU THR GLU MET TYR GLU ALA ALA ALA ASP SEQRES 20 A 385 ALA ASP VAL VAL PHE THR SER THR ALA SER GLU SER LEU SEQRES 21 A 385 LEU PHE THR LYS GLU HIS ALA GLU VAL LEU PRO PRO ILE SEQRES 22 A 385 SER LEU ALA MET GLY GLY VAL ARG LEU PHE VAL ASP ILE SEQRES 23 A 385 SER VAL PRO ARG ASN VAL GLY ALA CYS LEU SER GLU VAL SEQRES 24 A 385 GLU HIS ALA ARG VAL TYR ASN VAL ASP ASP LEU LYS GLU SEQRES 25 A 385 VAL VAL GLU ALA ASN LYS GLU ASP ARG VAL ARG LYS ALA SEQRES 26 A 385 MET GLU ALA GLN THR ILE ILE THR GLN GLU LEU LYS ARG SEQRES 27 A 385 PHE GLU ALA TRP ARG ASP SER LEU GLU THR VAL PRO THR SEQRES 28 A 385 ILE LYS LYS LEU ARG SER TYR ALA ASP ARG ILE ARG ALA SEQRES 29 A 385 SER GLU LEU GLU LYS CYS LEU GLN LYS ILE GLY GLU ASP SEQRES 30 A 385 ASN LEU ASN LYS LYS MET ARG ARG
HELIX 1 1 TRP A 28 ASN A 51 1 24 HELIX 2 2 ILE A 79 ARG A 85 5 7 HELIX 3 3 SER A 94 ASP A 108 1 15 HELIX 4 4 ILE A 117 GLN A 123 1 7 HELIX 5 5 GLY A 133 ASP A 139 1 7 HELIX 6 6 GLY A 149 THR A 156 1 8 HELIX 7 7 ASN A 157 LEU A 177 1 21 HELIX 8 8 GLY A 193 GLY A 207 1 15 HELIX 9 9 SER A 217 MET A 228 1 12 HELIX 10 10 PRO A 237 MET A 241 5 5 HELIX 11 11 GLU A 243 ASP A 247 5 5 HELIX 12 12 PRO A 271 ALA A 276 1 6 HELIX 13 13 VAL A 292 ALA A 302 1 11 HELIX 14 14 LEU A 310 GLU A 315 1 6 HELIX 15 15 VAL A 322 THR A 330 1 9 HELIX 16 16 LYS A 337 GLU A 347 1 11 HELIX 17 17 GLU A 347 ILE A 362 1 16 HELIX 18 18 LEU A 367 MET A 383 1 17
SHEET 1 A 3 ALA A 4 ILE A 6 0 SHEET 2 A 3 VAL A 58 SER A 61 -1 O ALA A 59 N VAL A 5 SHEET 3 A 3 LEU A 21 ALA A 24 1 O ALA A 22 N LEU A 60 SHEET 1 B 3 LYS A 210 VAL A 213 0 SHEET 2 B 3 MET A 187 ILE A 190 1 O LEU A 188 N VAL A 212 SHEET 3 B 3 VAL A 250 PHE A 252 1 O VAL A 250 N LEU A 189 SHEET 1 C 2 LEU A 282 PHE A 283 0 SHEET 2 C 2 TYR A 305 ASN A 306 1 O TYR A 305 N PHE A 283
CISPEP 1 ASP A 139 ARG A 140 0 20.71
SITE 1 CYS 1 CYS A 50
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000