10 20 30 40 50 60 70 80 1ARO - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER COMPLEX (POLYMERASE/HYDROLASE) 08-AUG-97 1ARO
TITLE T7 RNA POLYMERASE COMPLEXED WITH T7 LYSOZYME
COMPND MOL_ID: 1; COMPND 2 MOLECULE: T7 RNA POLYMERASE; COMPND 3 CHAIN: P; COMPND 4 EC: 2.7.7.6; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: T7 LYSOZYME; COMPND 9 CHAIN: L; COMPND 10 SYNONYM: N-ACETYLMURAMOYL-L-ALANINE AMIDASE; COMPND 11 EC: 3.5.1.28; COMPND 12 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T7; SOURCE 3 ORGANISM_TAXID: 10760; SOURCE 4 GENE: T7; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: T7; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: T7; SOURCE 10 EXPRESSION_SYSTEM_GENE: T7; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T7; SOURCE 13 ORGANISM_TAXID: 10760; SOURCE 14 GENE: T7; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: T7; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: T7; SOURCE 20 EXPRESSION_SYSTEM_GENE: T7
KEYWDS TRANSCRIPTION, DNA-DIRECTED RNA POLYMERASE, HYDROLASE, KEYWDS 2 GLYCOSIDASE, COMPLEX (POLYMERASE/HYDROLASE)
EXPDTA X-RAY DIFFRACTION
AUTHOR T.STEITZ,D.JERUZALMI
REVDAT 2 24-FEB-09 1ARO 1 VERSN REVDAT 1 21-OCT-98 1ARO 0
JRNL AUTH D.JERUZALMI,T.A.STEITZ JRNL TITL STRUCTURE OF T7 RNA POLYMERASE COMPLEXED TO THE JRNL TITL 2 TRANSCRIPTIONAL INHIBITOR T7 LYSOZYME. JRNL REF EMBO J. V. 17 4101 1998 JRNL REFN ISSN 0261-4189 JRNL PMID 9670025 JRNL DOI 10.1093/EMBOJ/17.14.4101
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, X-PLOR REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 38310 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.262 REMARK 3 FREE R VALUE : 0.309 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7599 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1ARO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : OCT-93 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.908 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : FUJI REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38310 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : 0.09600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.3700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : 0.44000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: CNS, DEMON-ANGEL, X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.0
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 136.69250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.80600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 136.69250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 47.80600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: P, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET P 1 REMARK 465 ASN P 2 REMARK 465 THR P 3 REMARK 465 ILE P 4 REMARK 465 ASN P 5 REMARK 465 ILE P 6 REMARK 465 ALA P 7 REMARK 465 LYS P 60 REMARK 465 ALA P 61 REMARK 465 GLY P 62 REMARK 465 GLU P 63 REMARK 465 VAL P 64 REMARK 465 ALA P 65 REMARK 465 ASP P 66 REMARK 465 ASN P 67 REMARK 465 ALA P 68 REMARK 465 ALA P 69 REMARK 465 ALA P 70 REMARK 465 LYS P 71 REMARK 465 PRO P 72 REMARK 465 ASN P 165 REMARK 465 VAL P 166 REMARK 465 GLU P 167 REMARK 465 GLU P 168 REMARK 465 GLN P 169 REMARK 465 LEU P 170 REMARK 465 ASN P 171 REMARK 465 LYS P 172 REMARK 465 ARG P 173 REMARK 465 VAL P 174 REMARK 465 GLY P 175 REMARK 465 HIS P 176 REMARK 465 VAL P 177 REMARK 465 TYR P 178 REMARK 465 LYS P 179 REMARK 465 LYS P 180 REMARK 465 ALA P 181 REMARK 465 ALA P 234 REMARK 465 GLY P 235 REMARK 465 VAL P 236 REMARK 465 VAL P 237 REMARK 465 GLY P 238 REMARK 465 GLN P 239 REMARK 465 ASP P 240 REMARK 465 LYS P 345 REMARK 465 HIS P 346 REMARK 465 SER P 347 REMARK 465 PRO P 348 REMARK 465 VAL P 349 REMARK 465 GLU P 350 REMARK 465 ASP P 351 REMARK 465 ILE P 352 REMARK 465 PRO P 353 REMARK 465 ALA P 354 REMARK 465 ILE P 355 REMARK 465 GLU P 356 REMARK 465 ARG P 357 REMARK 465 GLU P 358 REMARK 465 GLU P 359 REMARK 465 LEU P 360 REMARK 465 PRO P 361 REMARK 465 MET P 362 REMARK 465 LYS P 363 REMARK 465 PRO P 364 REMARK 465 GLU P 365 REMARK 465 ASP P 366 REMARK 465 ILE P 367 REMARK 465 ASP P 368 REMARK 465 MET P 369 REMARK 465 ASN P 370 REMARK 465 PRO P 371 REMARK 465 GLU P 372 REMARK 465 ALA P 373 REMARK 465 LEU P 374 REMARK 465 THR P 375 REMARK 465 ALA P 376 REMARK 465 TRP P 377 REMARK 465 LYS P 378 REMARK 465 ARG P 379 REMARK 465 ALA P 380 REMARK 465 ALA P 381 REMARK 465 ALA P 382 REMARK 465 ALA P 383 REMARK 465 THR P 590 REMARK 465 ASP P 591 REMARK 465 ASN P 592 REMARK 465 GLU P 593 REMARK 465 VAL P 594 REMARK 465 VAL P 595 REMARK 465 THR P 596 REMARK 465 VAL P 597 REMARK 465 THR P 598 REMARK 465 ASP P 599 REMARK 465 GLU P 600 REMARK 465 ASN P 601 REMARK 465 THR P 602 REMARK 465 GLY P 603 REMARK 465 GLU P 604 REMARK 465 ILE P 605 REMARK 465 SER P 606 REMARK 465 GLU P 607 REMARK 465 LYS P 608 REMARK 465 VAL P 609 REMARK 465 LYS P 610 REMARK 465 LEU P 611 REMARK 465 PHE P 880 REMARK 465 ALA P 881 REMARK 465 PHE P 882 REMARK 465 ALA P 883 REMARK 465 MET L 1000 REMARK 465 ALA L 1001
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS P 164 O REMARK 470 ASN P 233 O REMARK 470 TRP P 344 O REMARK 470 GLY P 589 O REMARK 470 ASP P 879 O
REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS P 8 CD CE NZ REMARK 480 ASN P 9 OD1 ND2 REMARK 480 ASP P 10 OD1 OD2 REMARK 480 PHE P 11 CD1 CD2 CE1 CE2 CZ REMARK 480 SER P 12 OG REMARK 480 ASP P 13 OD1 OD2 REMARK 480 LYS P 412 CB CG CD CE NZ REMARK 480 LYS P 454 CG CD CE NZ REMARK 480 LYS P 461 CG CD CE NZ REMARK 480 ARG P 478 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS P 480 CG CD CE NZ REMARK 480 GLU P 487 CB CG REMARK 480 LYS P 494 CG CD CE NZ REMARK 480 ARG P 557 CB CG CD NE CZ NH1 NH2 REMARK 480 GLN P 568 CB CG CD OE1 NE2 REMARK 480 LYS P 576 CD CE NZ REMARK 480 THR P 613 OG1 CG2 REMARK 480 LYS P 614 CD CE NZ REMARK 480 VAL P 629 CG1 CG2 REMARK 480 LYS P 631 CG CD CE NZ REMARK 480 ARG P 632 NE CZ NH1 NH2 REMARK 480 LYS P 642 CG CD CE NZ REMARK 480 GLU P 643 CB CG CD OE1 OE2 REMARK 480 ARG P 647 CB CG CD NE CZ NH1 NH2 REMARK 480 GLN P 672 CB CG CD OE1 NE2 REMARK 480 LEU P 680 CB CG CD1 CD2 REMARK 480 SER P 701 OG REMARK 480 VAL P 710 CG2 REMARK 480 LYS P 711 C CB CG CD CE NZ REMARK 480 ASP P 712 CB CG OD1 OD2 REMARK 480 LYS P 713 CB CG CD CE NZ REMARK 480 LYS P 714 CB CG CD CE NZ REMARK 480 THR P 715 CB OG1 CG2 REMARK 480 GLU P 717 CB CG CD OE1 OE2 REMARK 480 ILE P 718 CB CG1 CG2 CD1 REMARK 480 LEU P 719 CB CG CD1 CD2 REMARK 480 ILE P 743 CG1 CG2 CD1 REMARK 480 ARG P 756 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS P 765 CB CG CD CE NZ REMARK 480 LYS P 867 CG CD CE NZ REMARK 480 ARG P 873 NE CZ NH1 NH2 REMARK 480 LYS L 1022 CB CG CD CE NZ REMARK 480 LYS L 1070 CE NZ REMARK 480 LYS L 1088 CB CG CD CE NZ REMARK 480 LYS L 1128 CG CD CE NZ REMARK 480 ARG L 1149 CB CG CD NE CZ NH1 NH2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS P 8 ASN P 9 137.12 REMARK 500 LEU P 497 GLU P 498 -133.40 REMARK 500 ASN P 499 THR P 500 -141.40 REMARK 500 VAL P 559 ASN P 560 112.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 PHE P 162 0.12 SIDE_CHAIN REMARK 500 TYR L1046 0.08 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS P 8 27.71 REMARK 500 ASN P 9 -10.14 REMARK 500 ILE P 74 12.09 REMARK 500 LEU P 497 -14.11 REMARK 500 VAL P 559 16.04 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG L 903 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS L1018 SG REMARK 620 2 CYS L1130 SG 115.4 REMARK 620 3 CYS L1018 O 83.8 117.6 REMARK 620 4 CYS L1018 N 70.3 69.8 62.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG P 906 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS P 510 O REMARK 620 2 CYS P 467 SG 87.5 REMARK 620 N 1
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG L 903 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG P 904 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG P 905 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG P 906 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG P 907 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG P 908 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG P 909
DBREF 1ARO P 1 883 UNP P00573 RPOL_BPT7 1 883 DBREF 1ARO L 1001 1150 UNP P00806 NAAA_BPT7 1 150
SEQADV 1ARO SER P 347 UNP P00573 CYS 347 CONFLICT SEQADV 1ARO SER P 723 UNP P00573 CYS 723 ENGINEERED SEQADV 1ARO SER P 839 UNP P00573 CYS 839 ENGINEERED
SEQRES 1 P 883 MET ASN THR ILE ASN ILE ALA LYS ASN ASP PHE SER ASP SEQRES 2 P 883 ILE GLU LEU ALA ALA ILE PRO PHE ASN THR LEU ALA ASP SEQRES 3 P 883 HIS TYR GLY GLU ARG LEU ALA ARG GLU GLN LEU ALA LEU SEQRES 4 P 883 GLU HIS GLU SER TYR GLU MET GLY GLU ALA ARG PHE ARG SEQRES 5 P 883 LYS MET PHE GLU ARG GLN LEU LYS ALA GLY GLU VAL ALA SEQRES 6 P 883 ASP ASN ALA ALA ALA LYS PRO LEU ILE THR THR LEU LEU SEQRES 7 P 883 PRO LYS MET ILE ALA ARG ILE ASN ASP TRP PHE GLU GLU SEQRES 8 P 883 VAL LYS ALA LYS ARG GLY LYS ARG PRO THR ALA PHE GLN SEQRES 9 P 883 PHE LEU GLN GLU ILE LYS PRO GLU ALA VAL ALA TYR ILE SEQRES 10 P 883 THR ILE LYS THR THR LEU ALA CYS LEU THR SER ALA ASP SEQRES 11 P 883 ASN THR THR VAL GLN ALA VAL ALA SER ALA ILE GLY ARG SEQRES 12 P 883 ALA ILE GLU ASP GLU ALA ARG PHE GLY ARG ILE ARG ASP SEQRES 13 P 883 LEU GLU ALA LYS HIS PHE LYS LYS ASN VAL GLU GLU GLN SEQRES 14 P 883 LEU ASN LYS ARG VAL GLY HIS VAL TYR LYS LYS ALA PHE SEQRES 15 P 883 MET GLN VAL VAL GLU ALA ASP MET LEU SER LYS GLY LEU SEQRES 16 P 883 LEU GLY GLY GLU ALA TRP SER SER TRP HIS LYS GLU ASP SEQRES 17 P 883 SER ILE HIS VAL GLY VAL ARG CYS ILE GLU MET LEU ILE SEQRES 18 P 883 GLU SER THR GLY MET VAL SER LEU HIS ARG GLN ASN ALA SEQRES 19 P 883 GLY VAL VAL GLY GLN ASP SER GLU THR ILE GLU LEU ALA SEQRES 20 P 883 PRO GLU TYR ALA GLU ALA ILE ALA THR ARG ALA GLY ALA SEQRES 21 P 883 LEU ALA GLY ILE SER PRO MET PHE GLN PRO CYS VAL VAL SEQRES 22 P 883 PRO PRO LYS PRO TRP THR GLY ILE THR GLY GLY GLY TYR SEQRES 23 P 883 TRP ALA ASN GLY ARG ARG PRO LEU ALA LEU VAL ARG THR SEQRES 24 P 883 HIS SER LYS LYS ALA LEU MET ARG TYR GLU ASP VAL TYR SEQRES 25 P 883 MET PRO GLU VAL TYR LYS ALA ILE ASN ILE ALA GLN ASN SEQRES 26 P 883 THR ALA TRP LYS ILE ASN LYS LYS VAL LEU ALA VAL ALA SEQRES 27 P 883 ASN VAL ILE THR LYS TRP LYS HIS SER PRO VAL GLU ASP SEQRES 28 P 883 ILE PRO ALA ILE GLU ARG GLU GLU LEU PRO MET LYS PRO SEQRES 29 P 883 GLU ASP ILE ASP MET ASN PRO GLU ALA LEU THR ALA TRP SEQRES 30 P 883 LYS ARG ALA ALA ALA ALA VAL TYR ARG LYS ASP LYS ALA SEQRES 31 P 883 ARG LYS SER ARG ARG ILE SER LEU GLU PHE MET LEU GLU SEQRES 32 P 883 GLN ALA ASN LYS PHE ALA ASN HIS LYS ALA ILE TRP PHE SEQRES 33 P 883 PRO TYR ASN MET ASP TRP ARG GLY ARG VAL TYR ALA VAL SEQRES 34 P 883 SER MET PHE ASN PRO GLN GLY ASN ASP MET THR LYS GLY SEQRES 35 P 883 LEU LEU THR LEU ALA LYS GLY LYS PRO ILE GLY LYS GLU SEQRES 36 P 883 GLY TYR TYR TRP LEU LYS ILE HIS GLY ALA ASN CYS ALA SEQRES 37 P 883 GLY VAL ASP LYS VAL PRO PHE PRO GLU ARG ILE LYS PHE SEQRES 38 P 883 ILE GLU GLU ASN HIS GLU ASN ILE MET ALA CYS ALA LYS SEQRES 39 P 883 SER PRO LEU GLU ASN THR TRP TRP ALA GLU GLN ASP SER SEQRES 40 P 883 PRO PHE CYS PHE LEU ALA PHE CYS PHE GLU TYR ALA GLY SEQRES 41 P 883 VAL GLN HIS HIS GLY LEU SER TYR ASN CYS SER LEU PRO SEQRES 42 P 883 LEU ALA PHE ASP GLY SER CYS SER GLY ILE GLN HIS PHE SEQRES 43 P 883 SER ALA MET LEU ARG ASP GLU VAL GLY GLY ARG ALA VAL SEQRES 44 P 883 ASN LEU LEU PRO SER GLU THR VAL GLN ASP ILE TYR GLY SEQRES 45 P 883 ILE VAL ALA LYS LYS VAL ASN GLU ILE LEU GLN ALA ASP SEQRES 46 P 883 ALA ILE ASN GLY THR ASP ASN GLU VAL VAL THR VAL THR SEQRES 47 P 883 ASP GLU ASN THR GLY GLU ILE SER GLU LYS VAL LYS LEU SEQRES 48 P 883 GLY THR LYS ALA LEU ALA GLY GLN TRP LEU ALA TYR GLY SEQRES 49 P 883 VAL THR ARG SER VAL THR LYS ARG SER VAL MET THR LEU SEQRES 50 P 883 ALA TYR GLY SER LYS GLU PHE GLY PHE ARG GLN GLN VAL SEQRES 51 P 883 LEU GLU ASP THR ILE GLN PRO ALA ILE ASP SER GLY LYS SEQRES 52 P 883 GLY LEU MET PHE THR GLN PRO ASN GLN ALA ALA GLY TYR SEQRES 53 P 883 MET ALA LYS LEU ILE TRP GLU SER VAL SER VAL THR VAL SEQRES 54 P 883 VAL ALA ALA VAL GLU ALA MET ASN TRP LEU LYS SER ALA SEQRES 55 P 883 ALA LYS LEU LEU ALA ALA GLU VAL LYS ASP LYS LYS THR SEQRES 56 P 883 GLY GLU ILE LEU ARG LYS ARG SER ALA VAL HIS TRP VAL SEQRES 57 P 883 THR PRO ASP GLY PHE PRO VAL TRP GLN GLU TYR LYS LYS SEQRES 58 P 883 PRO ILE GLN THR ARG LEU ASN LEU MET PHE LEU GLY GLN SEQRES 59 P 883 PHE ARG LEU GLN PRO THR ILE ASN THR ASN LYS ASP SER SEQRES 60 P 883 GLU ILE ASP ALA HIS LYS GLN GLU SER GLY ILE ALA PRO SEQRES 61 P 883 ASN PHE VAL HIS SER GLN ASP GLY SER HIS LEU ARG LYS SEQRES 62 P 883 THR VAL VAL TRP ALA HIS GLU LYS TYR GLY ILE GLU SER SEQRES 63 P 883 PHE ALA LEU ILE HIS ASP SER PHE GLY THR ILE PRO ALA SEQRES 64 P 883 ASP ALA ALA ASN LEU PHE LYS ALA VAL ARG GLU THR MET SEQRES 65 P 883 VAL ASP THR TYR GLU SER SER ASP VAL LEU ALA ASP PHE SEQRES 66 P 883 TYR ASP GLN PHE ALA ASP GLN LEU HIS GLU SER GLN LEU SEQRES 67 P 883 ASP LYS MET PRO ALA LEU PRO ALA LYS GLY ASN LEU ASN SEQRES 68 P 883 LEU ARG ASP ILE LEU GLU SER ASP PHE ALA PHE ALA SEQRES 1 L 151 MET ALA ARG VAL GLN PHE LYS GLN ARG GLU SER THR ASP SEQRES 2 L 151 ALA ILE PHE VAL HIS CYS SER ALA THR LYS PRO SER GLN SEQRES 3 L 151 ASN VAL GLY VAL ARG GLU ILE ARG GLN TRP HIS LYS GLU SEQRES 4 L 151 GLN GLY TRP LEU ASP VAL GLY TYR HIS PHE ILE ILE LYS SEQRES 5 L 151 ARG ASP GLY THR VAL GLU ALA GLY ARG ASP GLU MET ALA SEQRES 6 L 151 VAL GLY SER HIS ALA LYS GLY TYR ASN HIS ASN SER ILE SEQRES 7 L 151 GLY VAL CYS LEU VAL GLY GLY ILE ASP ASP LYS GLY LYS SEQRES 8 L 151 PHE ASP ALA ASN PHE THR PRO ALA GLN MET GLN SER LEU SEQRES 9 L 151 ARG SER LEU LEU VAL THR LEU LEU ALA LYS TYR GLU GLY SEQRES 10 L 151 ALA VAL LEU ARG ALA HIS HIS GLU VAL ALA PRO LYS ALA SEQRES 11 L 151 CYS PRO SER PHE ASP LEU LYS ARG TRP TRP GLU LYS ASN SEQRES 12 L 151 GLU LEU VAL THR SER ASP ARG GLY
HET HG L 903 1 HET HG P 904 1 HET HG P 905 1 HET HG P 906 1 HET HG P 907 1 HET HG P 908 1 HET HG P 909 1
HETNAM HG MERCURY (II) ION
FORMUL 3 HG 7(HG 2+)
HELIX 1 1 GLU P 15 HIS P 27 1 13 HELIX 2 2 GLU P 30 SER P 43 1 14 HELIX 3 3 GLU P 48 GLN P 58 1 11 HELIX 4 4 LEU P 77 VAL P 92 1 16 HELIX 5 5 PHE P 103 GLN P 107 1 5 HELIX 6 6 PRO P 111 THR P 127 1 17 HELIX 7 7 VAL P 134 LYS P 160 1 27 HELIX 8 8 LYS P 206 SER P 223 1 18 HELIX 9 9 PRO P 248 THR P 256 1 9 HELIX 10 10 ALA P 260 GLY P 263 5 4 HELIX 11 11 LYS P 302 ARG P 307 1 6 HELIX 12 12 PRO P 314 ASN P 325 1 12 HELIX 13 13 LYS P 332 ILE P 341 1 10 HELIX 14 14 LYS P 389 LYS P 407 1 19 HELIX 15 15 ASP P 438 LEU P 443 1 6 HELIX 16 16 GLY P 453 ALA P 468 1 16 HELIX 17 17 PHE P 475 ALA P 491 1 17 HELIX 18 18 TRP P 502 GLU P 504 5 3 HELIX 19 19 PHE P 509 HIS P 524 1 16 HELIX 20 20 HIS P 545 LEU P 550 1 6 HELIX 21 21 GLU P 553 VAL P 559 1 7 HELIX 22 22 ILE P 570 ALA P 586 1 17 HELIX 23 23 GLN P 619 TYR P 623 1 5 HELIX 24 24 GLU P 643 ASP P 653 5 11 HELIX 25 25 GLN P 656 ILE P 659 1 4 HELIX 26 26 ASN P 671 THR P 688 1 18 HELIX 27 27 VAL P 690 LEU P 706 1 17 HELIX 28 28 ALA P 771 SER P 776 1 6 HELIX 29 29 ILE P 778 TRP P 797 1 20 HELIX 30 30 PRO P 818 GLU P 837 1 20 HELIX 31 31 VAL P 841 GLN P 852 1 12 HELIX 32 32 ARG P 873 ILE P 875 5 3 HELIX 33 33 VAL L 1029 GLU L 1038 1 10 HELIX 34 34 ASN L 1073 ASN L 1075 5 3 HELIX 35 35 PRO L 1097 LYS L 1113 1 17 HELIX 36 36 HIS L 1122 GLU L 1124 5 3 HELIX 37 37 LEU L 1135 GLU L 1140 1 6
SHEET 1 A 2 TRP P 328 ILE P 330 0 SHEET 2 A 2 LEU P 444 LEU P 446 -1 N THR P 445 O LYS P 329 SHEET 1 B 2 TYR P 418 MET P 420 0 SHEET 2 B 2 VAL P 426 ALA P 428 -1 N TYR P 427 O ASN P 419 SHEET 1 C 2 VAL P 725 VAL P 728 0 SHEET 2 C 2 PRO P 734 GLN P 737 -1 N GLN P 737 O VAL P 725 SHEET 1 D 5 VAL L1118 ALA L1121 0 SHEET 2 D 5 ALA L1013 CYS L1018 1 N ILE L1014 O VAL L1118 SHEET 3 D 5 SER L1076 LEU L1081 1 N ILE L1077 O ALA L1013 SHEET 4 D 5 PHE L1048 ILE L1050 1 N PHE L1048 O CYS L1080 SHEET 5 D 5 VAL L1056 ALA L1058 -1 N GLU L1057 O ILE L1049
LINK HG HG L 903 SG CYS L1018 1555 1555 2.25 LINK HG HG L 903 SG CYS L1130 1555 1555 2.26 LINK HG HG P 904 SG CYS P 125 1555 1555 1.46 LINK HG HG P 905 SG CYS P 530 1555 1555 1.76 LINK HG HG L 903 O CYS L1018 1555 1555 1.81 LINK HG HG L 903 N CYS L1018 1555 1555 3.49 LINK HG HG P 906 O CYS P 510 1555 1555 2.63 LINK HG HG P 906 SG CYS P 467 1555 1555 2.81 LINK HG HG P 907 SD MET P 313 1555 1555 2.29 LINK HG HG P 908 SD MET P 401 1555 1555 2.36 LINK HG HG P 909 SG CYS P 540 1555 1555 2.66
CISPEP 1 CYS L 1130 PRO L 1131 0 -0.45
SITE 1 AC1 3 CYS L1018 SER L1019 CYS L1130 SITE 1 AC2 2 CYS P 125 ALA P 140 SITE 1 AC3 3 GLU P 517 TYR P 528 CYS P 530 SITE 1 AC4 2 CYS P 467 CYS P 510 SITE 1 AC5 1 MET P 313 SITE 1 AC6 1 MET P 401 SITE 1 AC7 2 SER P 539 CYS P 540
CRYST1 273.385 95.612 63.582 90.00 101.40 90.00 C 1 2 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.003658 0.000000 0.000738 0.00000
SCALE2 0.000000 0.010459 0.000000 0.00000
SCALE3 0.000000 0.000000 0.016044 0.00000