10 20 30 40 50 60 70 80 1ARK - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 07-AUG-97 1ARK
TITLE SH3 DOMAIN FROM HUMAN NEBULIN, NMR, 15 STRUCTURES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEBULIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN, RESIDUES 6610 - 6669; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELL_LINE: BL21 (DE3) PLYSS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: BL21 (DE3) PLYSS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: BL21
KEYWDS TRANSFERASE, SH3 DOMAIN, NEBULIN, Z-DISK ASSEMBLY, ACTIN- KEYWDS 2 BINDING
EXPDTA SOLUTION NMR
NUMMDL 15
AUTHOR A.S.POLITOU,A.PASTORE
REVDAT 2 24-FEB-09 1ARK 1 VERSN REVDAT 1 28-JAN-98 1ARK 0
JRNL AUTH A.S.POLITOU,S.MILLEVOI,M.GAUTEL,B.KOLMERER, JRNL AUTH 2 A.PASTORE JRNL TITL SH3 IN MUSCLES: SOLUTION STRUCTURE OF THE SH3 JRNL TITL 2 DOMAIN FROM NEBULIN. JRNL REF J.MOL.BIOL. V. 276 189 1998 JRNL REFN ISSN 0022-2836 JRNL PMID 9514727 JRNL DOI 10.1006/JMBI.1997.1521
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1ARK COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 6.9 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY, TOCSY, DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : BRUKER UXNMR UXNMR REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 5 169.56 54.91 REMARK 500 1 ASP A 16 -155.86 -147.69 REMARK 500 1 GLU A 19 -168.62 -103.35 REMARK 500 1 ILE A 29 -135.24 -106.62 REMARK 500 1 ASN A 30 79.29 -169.03 REMARK 500 1 ALA A 33 103.70 -172.22 REMARK 500 1 ASP A 35 155.53 59.99 REMARK 500 1 GLU A 36 38.85 38.28 REMARK 500 1 VAL A 43 107.68 -55.84 REMARK 500 1 THR A 46 -47.30 -140.05 REMARK 500 2 ALA A 2 -150.20 53.27 REMARK 500 2 ILE A 29 -143.12 -126.98 REMARK 500 2 ASN A 30 76.82 -157.15 REMARK 500 2 GLN A 32 -72.25 -133.45 REMARK 500 2 ALA A 33 116.18 59.86 REMARK 500 2 ASP A 35 -177.43 -177.81 REMARK 500 2 TRP A 38 140.07 59.67 REMARK 500 2 TYR A 56 -62.60 -95.27 REMARK 500 3 ALA A 2 -82.42 -105.55 REMARK 500 3 LYS A 4 -170.45 45.14 REMARK 500 3 VAL A 20 -151.81 -120.11 REMARK 500 3 ILE A 29 -156.53 -64.74 REMARK 500 3 ILE A 34 -72.05 -59.80 REMARK 500 3 ASP A 35 -63.74 -176.37 REMARK 500 3 TRP A 38 170.99 55.25 REMARK 500 3 THR A 46 -68.16 -92.11 REMARK 500 4 LYS A 4 -169.43 -77.83 REMARK 500 4 ILE A 29 -159.19 -73.71 REMARK 500 4 VAL A 31 -80.96 -73.43 REMARK 500 4 ILE A 34 -80.38 -73.16 REMARK 500 4 ASP A 35 18.07 -169.53 REMARK 500 4 TYR A 56 -40.15 -131.78 REMARK 500 5 ILE A 5 141.59 61.25 REMARK 500 5 GLU A 19 -165.46 -118.14 REMARK 500 5 ALA A 33 80.76 53.31 REMARK 500 5 ASP A 35 -69.92 65.42 REMARK 500 5 TRP A 38 179.04 52.56 REMARK 500 5 VAL A 43 97.45 -61.98 REMARK 500 5 ARG A 48 -168.93 -70.54 REMARK 500 6 LYS A 4 -171.59 -69.58 REMARK 500 6 ASP A 11 71.63 60.36 REMARK 500 6 ASP A 16 -151.03 -95.77 REMARK 500 6 ILE A 29 -169.84 -58.88 REMARK 500 6 VAL A 31 -158.42 -80.84 REMARK 500 6 GLN A 32 -156.89 -160.49 REMARK 500 6 ALA A 33 -152.46 -137.23 REMARK 500 6 ILE A 34 -85.79 -128.45 REMARK 500 6 ASP A 35 -64.20 -108.81 REMARK 500 6 MET A 39 -152.13 -146.30 REMARK 500 6 ARG A 45 -71.56 -75.85 REMARK 500 7 ASP A 16 -35.02 -175.64 REMARK 500 7 ALA A 17 -32.36 -176.64 REMARK 500 7 ASP A 24 83.51 -70.00 REMARK 500 7 ILE A 29 -145.59 -131.01 REMARK 500 7 MET A 39 -163.12 -123.44 REMARK 500 8 ILE A 5 175.65 47.75 REMARK 500 8 ASP A 11 92.01 -59.13 REMARK 500 8 ASP A 16 -82.04 -109.21 REMARK 500 8 ALA A 17 -54.25 -170.36 REMARK 500 8 VAL A 20 -156.75 -113.46 REMARK 500 8 ILE A 29 -142.32 -112.93 REMARK 500 8 THR A 46 -59.57 -131.77 REMARK 500 9 ILE A 5 160.91 57.59 REMARK 500 9 ARG A 7 138.12 -170.03 REMARK 500 9 ASP A 16 -69.73 -154.33 REMARK 500 9 ALA A 17 -34.11 -163.63 REMARK 500 9 VAL A 20 -152.72 -110.36 REMARK 500 9 ILE A 29 -140.03 -117.96 REMARK 500 9 ASN A 30 69.83 -172.19 REMARK 500 9 GLN A 32 -65.61 -144.53 REMARK 500 9 ALA A 33 133.91 61.58 REMARK 500 9 ASP A 35 -66.54 66.71 REMARK 500 9 TRP A 38 176.69 52.90 REMARK 500 9 ARG A 45 -70.31 -66.91 REMARK 500 10 LYS A 4 -168.99 -78.17 REMARK 500 10 ASP A 11 90.59 58.68 REMARK 500 10 ALA A 14 158.57 57.23 REMARK 500 10 ASP A 16 -155.66 -141.02 REMARK 500 10 ASP A 35 -161.99 -171.73 REMARK 500 10 TRP A 38 169.97 55.07 REMARK 500 10 MET A 39 -147.96 -149.61 REMARK 500 11 ILE A 5 171.74 54.94 REMARK 500 11 ALA A 14 166.87 55.15 REMARK 500 11 ASP A 16 -157.86 -149.86 REMARK 500 11 VAL A 20 -162.62 -105.24 REMARK 500 11 ASP A 24 81.73 -69.83 REMARK 500 11 VAL A 31 -86.64 56.28 REMARK 500 11 GLN A 32 139.93 -171.09 REMARK 500 11 TYR A 56 -73.66 -88.29 REMARK 500 12 ILE A 34 -70.12 -78.81 REMARK 500 12 ASP A 35 -47.59 -178.85 REMARK 500 12 GLU A 36 -82.47 -59.29 REMARK 500 12 VAL A 43 109.83 -57.14 REMARK 500 12 ARG A 45 -74.07 -75.83 REMARK 500 12 TYR A 56 -60.95 -98.52 REMARK 500 13 ALA A 2 72.42 -175.30 REMARK 500 13 ILE A 5 159.66 58.10 REMARK 500 13 ASP A 16 -154.85 -130.72 REMARK 500 13 VAL A 20 -165.27 -113.70 REMARK 500 13 ILE A 29 -160.23 -60.70 REMARK 500 13 ASN A 30 79.10 -160.79 REMARK 500 13 ASP A 35 -72.19 65.41 REMARK 500 13 GLU A 36 47.05 -88.11 REMARK 500 13 TRP A 38 178.52 52.99 REMARK 500 13 VAL A 57 170.33 -56.30 REMARK 500 14 LYS A 4 -168.77 -56.05 REMARK 500 14 VAL A 20 -169.95 -115.79 REMARK 500 14 ASP A 24 93.06 -65.96 REMARK 500 14 ILE A 29 -35.58 -171.61 REMARK 500 14 ASN A 30 -78.64 -46.66 REMARK 500 14 VAL A 31 -109.21 -95.13 REMARK 500 14 GLN A 32 -152.76 -176.26 REMARK 500 14 ASP A 35 146.08 61.75 REMARK 500 14 GLU A 36 98.33 54.49 REMARK 500 14 TRP A 38 171.30 54.80 REMARK 500 14 MET A 39 -167.84 -122.56 REMARK 500 14 TYR A 56 -60.69 -98.94 REMARK 500 15 ALA A 2 30.38 -152.88 REMARK 500 15 ASP A 24 94.64 -46.73 REMARK 500 15 ILE A 29 -152.77 -69.07 REMARK 500 15 VAL A 31 -83.49 -100.98 REMARK 500 15 ALA A 33 -166.59 -165.92 REMARK 500 15 ILE A 34 -60.63 65.96 REMARK 500 15 ASP A 35 171.49 -56.09 REMARK 500 15 GLU A 36 -168.80 54.25 REMARK 500 15 TYR A 56 -66.99 -106.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 7 0.32 SIDE_CHAIN REMARK 500 1 ARG A 45 0.17 SIDE_CHAIN REMARK 500 1 ARG A 48 0.30 SIDE_CHAIN REMARK 500 2 ARG A 7 0.29 SIDE_CHAIN REMARK 500 2 ARG A 45 0.31 SIDE_CHAIN REMARK 500 2 ARG A 48 0.29 SIDE_CHAIN REMARK 500 3 ARG A 7 0.30 SIDE_CHAIN REMARK 500 3 ARG A 45 0.25 SIDE_CHAIN REMARK 500 3 ARG A 48 0.23 SIDE_CHAIN REMARK 500 4 ARG A 7 0.25 SIDE_CHAIN REMARK 500 4 ARG A 45 0.28 SIDE_CHAIN REMARK 500 4 ARG A 48 0.14 SIDE_CHAIN REMARK 500 5 ARG A 7 0.30 SIDE_CHAIN REMARK 500 5 ARG A 45 0.20 SIDE_CHAIN REMARK 500 5 ARG A 48 0.30 SIDE_CHAIN REMARK 500 6 ARG A 7 0.28 SIDE_CHAIN REMARK 500 6 ARG A 45 0.08 SIDE_CHAIN REMARK 500 6 ARG A 48 0.26 SIDE_CHAIN REMARK 500 7 ARG A 7 0.32 SIDE_CHAIN REMARK 500 7 ARG A 45 0.16 SIDE_CHAIN REMARK 500 7 ARG A 48 0.18 SIDE_CHAIN REMARK 500 8 ARG A 7 0.31 SIDE_CHAIN REMARK 500 8 ARG A 45 0.24 SIDE_CHAIN REMARK 500 8 ARG A 48 0.30 SIDE_CHAIN REMARK 500 9 ARG A 7 0.23 SIDE_CHAIN REMARK 500 9 ARG A 45 0.23 SIDE_CHAIN REMARK 500 9 ARG A 48 0.29 SIDE_CHAIN REMARK 500 10 ARG A 7 0.16 SIDE_CHAIN REMARK 500 10 ARG A 45 0.30 SIDE_CHAIN REMARK 500 10 ARG A 48 0.32 SIDE_CHAIN REMARK 500 11 ARG A 7 0.17 SIDE_CHAIN REMARK 500 11 ARG A 45 0.20 SIDE_CHAIN REMARK 500 11 ARG A 48 0.31 SIDE_CHAIN REMARK 500 12 ARG A 7 0.18 SIDE_CHAIN REMARK 500 12 ARG A 45 0.30 SIDE_CHAIN REMARK 500 12 ARG A 48 0.32 SIDE_CHAIN REMARK 500 13 ARG A 7 0.28 SIDE_CHAIN REMARK 500 13 ARG A 45 0.32 SIDE_CHAIN REMARK 500 13 ARG A 48 0.30 SIDE_CHAIN REMARK 500 14 ARG A 7 0.24 SIDE_CHAIN REMARK 500 14 ARG A 45 0.31 SIDE_CHAIN REMARK 500 14 ARG A 48 0.32 SIDE_CHAIN REMARK 500 15 ARG A 7 0.28 SIDE_CHAIN REMARK 500 15 ARG A 45 0.28 SIDE_CHAIN REMARK 500 15 ARG A 48 0.27 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
DBREF 1ARK A 1 60 UNP P20929 NEBU_HUMAN 918 977
SEQRES 1 A 60 THR ALA GLY LYS ILE PHE ARG ALA MET TYR ASP TYR MET SEQRES 2 A 60 ALA ALA ASP ALA ASP GLU VAL SER PHE LYS ASP GLY ASP SEQRES 3 A 60 ALA ILE ILE ASN VAL GLN ALA ILE ASP GLU GLY TRP MET SEQRES 4 A 60 TYR GLY THR VAL GLN ARG THR GLY ARG THR GLY MET LEU SEQRES 5 A 60 PRO ALA ASN TYR VAL GLU ALA ILE
HELIX 1 H ALA A 54 TYR A 56 5ONE TURN 3
SHEET 1 B1 1 PHE A 6 MET A 9 0 SHEET 1 B2 1 GLN A 32 ILE A 34 0 SHEET 1 C1 1 ALA A 27 ILE A 29 0 SHEET 1 C2 1 TRP A 38 VAL A 43 0 SHEET 1 D1 1 VAL A 57 ILE A 60 0 SHEET 1 D2 1 ARG A 48 PRO A 53 0 SHEET 1 B3 2 ASP A 11 ALA A 14 0 SHEET 2 B3 2 SER A 21 ASP A 24 0
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000