10 20 30 40 50 60 70 80 1AL6 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LYASE 12-JUN-97 1AL6
TITLE CHICKEN CITRATE SYNTHASE COMPLEX WITH N-HYDROXYAMIDO-COA AND TITLE 2 OXALOACETATE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CITRATE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 EC: 4.1.3.7
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 CELL_LINE: 293; SOURCE 6 ORGAN: HEART; SOURCE 7 TISSUE: MUSCLE; SOURCE 8 ORGANELLE: MITOCHONDRION; SOURCE 9 CELLULAR_LOCATION: INNER MATRIX
KEYWDS OXO-ACID-LYASE, LYASE
EXPDTA X-RAY DIFFRACTION
AUTHOR K.C.USHER,S.J.REMINGTON
REVDAT 3 13-JUL-11 1AL6 1 VERSN REVDAT 2 24-FEB-09 1AL6 1 VERSN REVDAT 1 24-DEC-97 1AL6 0
JRNL AUTH B.SCHWARTZ,K.W.VOGEL,K.C.USHER,C.NARASIMHAN,H.M.MIZIORKO, JRNL AUTH 2 S.J.REMINGTON,D.G.DRUECKHAMMER JRNL TITL MECHANISMS OF ENZYME-CATALYZED DEPROTONATION OF JRNL TITL 2 ACETYL-COENZYME A JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.C.USHER,S.J.REMINGTON,D.P.MARTIN,D.G.DRUECKHAMMER REMARK 1 TITL A VERY SHORT HYDROGEN BOND PROVIDES ONLY MODERATE REMARK 1 TITL 2 STABILIZATION OF AN ENZYME-INHIBITOR COMPLEX OF CITRATE REMARK 1 TITL 3 SYNTHASE REMARK 1 REF BIOCHEMISTRY V. 33 7753 1994 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.KARPUSAS,B.BRANCHAUD,S.J.REMINGTON REMARK 1 TITL PROPOSED MECHANISM FOR THE CONDENSATION REACTION OF CITRATE REMARK 1 TITL 2 SYNTHASE: 1.9-A STRUCTURE OF THE TERNARY COMPLEX WITH REMARK 1 TITL 3 OXALOACETATE AND CARBOXYMETHYL COENZYME A REMARK 1 REF BIOCHEMISTRY V. 29 2213 1990 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 3 REMARK 1 AUTH G.WIEGAND,S.REMINGTON,J.DEISENHOFER,R.HUBER REMARK 1 TITL CRYSTAL STRUCTURE ANALYSIS AND MOLECULAR MODEL OF A COMPLEX REMARK 1 TITL 2 OF CITRATE SYNTHASE WITH OXALOACETATE AND REMARK 1 TITL 3 S-ACETONYL-COENZYME A REMARK 1 REF J.MOL.BIOL. V. 174 205 1984 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 4 REMARK 1 AUTH S.REMINGTON,G.WIEGAND,R.HUBER REMARK 1 TITL CRYSTALLOGRAPHIC REFINEMENT AND ATOMIC MODELS OF TWO REMARK 1 TITL 2 DIFFERENT FORMS OF CITRATE SYNTHASE AT 2.7 AND 1.7 A REMARK 1 TITL 3 RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 158 111 1982 REMARK 1 REFN ISSN 0022-2836
REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT V. 5-F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.0 REMARK 3 NUMBER OF REFLECTIONS : 34332 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.1570 REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 34332 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3391 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 61 REMARK 3 SOLVENT ATOMS : 143 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.014 ; 1.000 ; 3481 REMARK 3 BOND ANGLES (DEGREES) : 2.200 ; 2.000 ; 4715 REMARK 3 TORSION ANGLES (DEGREES) : 15.800; 0.000 ; 2008 REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : 0.020 ; 1.000 ; 73 REMARK 3 GENERAL PLANES (A) : 0.016 ; 5.000 ; 509 REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : 4.800 ; 1.000 ; 3419 REMARK 3 NON-BONDED CONTACTS (A) : 0.058 ; 20.000; 41 REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : BABINET SCALING REMARK 3 KSOL : 0.75 REMARK 3 BSOL : 426.00 REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : TNT PROTGEO REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : TNT BCORREL V1.0 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1AL6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-97 REMARK 200 TEMPERATURE (KELVIN) : 295 REMARK 200 PH : 6.0-6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH2R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE(002) REMARK 200 OPTICS : COLLIMATOR REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : XUONG-HAMLIN MULTIWIRE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SDMS REMARK 200 DATA SCALING SOFTWARE : SDMS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34332 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.0 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.20 REMARK 200 R MERGE FOR SHELL (I) : 0.15500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR SUBSTITUTION REMARK 200 SOFTWARE USED: TNT REMARK 200 STARTING MODEL: PDB ENTRY 1CSH REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZED FROM 1.02M NA CITRATE, PH REMARK 280 6.0 5 MM OXALOACETATE, PH 6 2 MM N- REMARK 280 HYDROXYAMIDOCARBOXYMETHYLDETHIA COENZYME A.
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 52.21500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.24000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 52.21500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.24000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 13500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 SER A 2
REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 3 OG REMARK 480 LYS A 16 CD CE NZ REMARK 480 ARG A 20 NE CZ NH1 NH2 REMARK 480 LYS A 22 CG CD CE NZ REMARK 480 GLN A 26 CG CD OE1 NE2 REMARK 480 GLN A 27 CD OE1 NE2 REMARK 480 ASN A 30 CG OD1 ND2 REMARK 480 GLN A 35 CD OE1 NE2 REMARK 480 GLU A 62 CD OE1 OE2 REMARK 480 ARG A 65 NE CZ NH2 REMARK 480 GLN A 75 CD OE1 NE2 REMARK 480 LYS A 76 CD CE NZ REMARK 480 GLU A 85 CD OE1 OE2 REMARK 480 GLN A 100 CD NE2 REMARK 480 LYS A 112 CE REMARK 480 LYS A 116 CE NZ REMARK 480 ASN A 153 ND2 REMARK 480 ARG A 156 NE CZ REMARK 480 GLU A 160 CD OE2 REMARK 480 ARG A 164 CD NE NH2 REMARK 480 LYS A 188 NZ REMARK 480 LYS A 206 NZ REMARK 480 GLN A 287 CD OE1 REMARK 480 GLN A 289 CD OE1 REMARK 480 LYS A 290 CD CE NZ REMARK 480 ASP A 291 OD1 REMARK 480 ALA A 294 O REMARK 480 ASP A 295 CG OD1 OD2 REMARK 480 GLU A 299 CD OE1 OE2 REMARK 480 ARG A 302 NE CZ NH1 NH2 REMARK 480 TYR A 304 OH REMARK 480 GLU A 335 CD OE1 OE2 REMARK 480 LYS A 339 CD CE NZ REMARK 480 LYS A 348 CD CE NZ REMARK 480 GLU A 363 OE2 REMARK 480 LYS A 366 CE REMARK 480 LYS A 368 CE NZ REMARK 480 LYS A 432 CG CD CE NZ
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 566 O HOH A 566 2555 1.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 105 CD GLU A 105 OE1 0.075 REMARK 500 GLU A 239 CD GLU A 239 OE1 0.071 REMARK 500 GLU A 431 CD GLU A 431 OE1 -0.071 REMARK 500 GLU A 431 CD GLU A 431 OE2 0.081 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 39 CB - CG - OD1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ASP A 39 CB - CG - OD2 ANGL. DEV. = -8.5 DEGREES REMARK 500 ASP A 59 CB - CG - OD1 ANGL. DEV. = -7.1 DEGREES REMARK 500 ASP A 59 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 61 CB - CG - OD1 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG A 117 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 117 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP A 237 CB - CG - OD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 ASP A 291 CB - CG - OD1 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP A 291 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 344 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 344 CB - CG - OD2 ANGL. DEV. = -7.2 DEGREES REMARK 500 ARG A 401 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 205 -9.64 -59.14 REMARK 500 HIS A 238 58.73 -153.86 REMARK 500 GLU A 239 -174.95 61.25 REMARK 500 HIS A 274 -125.49 -111.87 REMARK 500 ALA A 294 -66.23 21.21 REMARK 500 LEU A 341 51.04 -145.62 REMARK 500 ARG A 421 85.85 -156.30 REMARK 500 ALA A 435 -33.06 155.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ILE A 14 24.2 L L OUTSIDE RANGE REMARK 500 GLU A 239 24.4 L L OUTSIDE RANGE REMARK 500 ASN A 278 24.5 L L OUTSIDE RANGE REMARK 500 ALA A 294 20.0 L L OUTSIDE RANGE REMARK 500 GLU A 335 22.2 L L OUTSIDE RANGE REMARK 500 MET A 390 24.2 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 511 DISTANCE = 5.44 ANGSTROMS
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ACT REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: ENZYME ACTIVE SITE. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OAA A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HAX A 700
DBREF 1AL6 A 1 433 UNP P23007 CISY_CHICK 1 429
SEQADV 1AL6 SER A 12 UNP P23007 ALA 12 CONFLICT SEQADV 1AL6 ASN A 30 UNP P23007 GLY 30 CONFLICT SEQADV 1AL6 VAL A 33 UNP P23007 LEU 33 CONFLICT SEQADV 1AL6 ILE A 52 UNP P23007 VAL 52 CONFLICT SEQADV 1AL6 ALA A 81 UNP P23007 INSERTION SEQADV 1AL6 GLU A 85 UNP P23007 GLY 84 CONFLICT SEQADV 1AL6 PRO A 104 UNP P23007 GLY 103 CONFLICT SEQADV 1AL6 GLU A 105 UNP P23007 ALA 104 CONFLICT SEQADV 1AL6 VAL A 110 UNP P23007 LEU 109 CONFLICT SEQADV 1AL6 ASN A 163 UNP P23007 LEU 162 CONFLICT SEQADV 1AL6 PHE A 170 UNP P23007 MET 169 CONFLICT SEQADV 1AL6 ASP A 174 UNP P23007 SER 173 CONFLICT SEQADV 1AL6 PRO A 222 UNP P23007 ALA 221 CONFLICT SEQADV 1AL6 LEU A 283 UNP P23007 GLY 282 CONFLICT SEQADV 1AL6 SER A 286 UNP P23007 ALA 285 CONFLICT SEQADV 1AL6 ASP A 291 UNP P23007 ALA 290 CONFLICT SEQADV 1AL6 LEU A 292 UNP P23007 ALA 291 CONFLICT SEQADV 1AL6 ASP A 298 UNP P23007 INSERTION SEQADV 1AL6 GLU A 299 UNP P23007 INSERTION SEQADV 1AL6 LYS A 300 UNP P23007 INSERTION SEQADV 1AL6 SER A 343 UNP P23007 GLY 339 CONFLICT SEQADV 1AL6 LYS A 366 UNP P23007 ALA 362 CONFLICT SEQADV 1AL6 LYS A 368 UNP P23007 ALA 364 CONFLICT SEQADV 1AL6 ALA A 428 UNP P23007 ASP 424 CONFLICT SEQADV 1AL6 GLU A 431 UNP P23007 ILE 427 CONFLICT SEQADV 1AL6 LYS A 432 UNP P23007 ALA 428 CONFLICT
SEQRES 1 A 437 ALA SER SER THR ASN LEU LYS ASP VAL LEU ALA SER LEU SEQRES 2 A 437 ILE PRO LYS GLU GLN ALA ARG ILE LYS THR PHE ARG GLN SEQRES 3 A 437 GLN HIS GLY ASN THR ALA VAL GLY GLN ILE THR VAL ASP SEQRES 4 A 437 MET SER TYR GLY GLY MET ARG GLY MET LYS GLY LEU ILE SEQRES 5 A 437 TYR GLU THR SER VAL LEU ASP PRO ASP GLU GLY ILE ARG SEQRES 6 A 437 PHE ARG GLY PHE SER ILE PRO GLU CYS GLN LYS LEU LEU SEQRES 7 A 437 PRO LYS ALA GLY GLY GLY GLU GLU PRO LEU PRO GLU GLY SEQRES 8 A 437 LEU PHE TRP LEU LEU VAL THR GLY GLN ILE PRO THR PRO SEQRES 9 A 437 GLU GLN VAL SER TRP VAL SER LYS GLU TRP ALA LYS ARG SEQRES 10 A 437 ALA ALA LEU PRO SER HIS VAL VAL THR MET LEU ASP ASN SEQRES 11 A 437 PHE PRO THR ASN LEU HIS PRO MET SER GLN LEU SER ALA SEQRES 12 A 437 ALA ILE THR ALA LEU ASN SER GLU SER ASN PHE ALA ARG SEQRES 13 A 437 ALA TYR ALA GLU GLY ILE ASN ARG THR LYS TYR TRP GLU SEQRES 14 A 437 PHE VAL TYR GLU ASP ALA MET ASP LEU ILE ALA LYS LEU SEQRES 15 A 437 PRO CYS VAL ALA ALA LYS ILE TYR ARG ASN LEU TYR ARG SEQRES 16 A 437 ALA GLY SER SER ILE GLY ALA ILE ASP SER LYS LEU ASP SEQRES 17 A 437 TRP SER HIS ASN PHE THR ASN MET LEU GLY TYR THR ASP SEQRES 18 A 437 PRO GLN PHE THR GLU LEU MET ARG LEU TYR LEU THR ILE SEQRES 19 A 437 HIS SER ASP HIS GLU GLY GLY ASN VAL SER ALA HIS THR SEQRES 20 A 437 SER HIS LEU VAL GLY SER ALA LEU SER ASP PRO TYR LEU SEQRES 21 A 437 SER PHE ALA ALA ALA MET ASN GLY LEU ALA GLY PRO LEU SEQRES 22 A 437 HIS GLY LEU ALA ASN GLN GLU VAL LEU LEU TRP LEU SER SEQRES 23 A 437 GLN LEU GLN LYS ASP LEU GLY ALA ASP ALA SER ASP GLU SEQRES 24 A 437 LYS LEU ARG ASP TYR ILE TRP ASN THR LEU ASN SER GLY SEQRES 25 A 437 ARG VAL VAL PRO GLY TYR GLY HIS ALA VAL LEU ARG LYS SEQRES 26 A 437 THR ASP PRO ARG TYR THR CYS GLN ARG GLU PHE ALA LEU SEQRES 27 A 437 LYS HIS LEU PRO SER ASP PRO MET PHE LYS LEU VAL ALA SEQRES 28 A 437 GLN LEU TYR LYS ILE VAL PRO ASN VAL LEU LEU GLU GLN SEQRES 29 A 437 GLY LYS ALA LYS ASN PRO TRP PRO ASN VAL ASP ALA HIS SEQRES 30 A 437 SER GLY VAL LEU LEU GLN TYR TYR GLY MET THR GLU MET SEQRES 31 A 437 ASN TYR TYR THR VAL LEU PHE GLY VAL SER ARG ALA LEU SEQRES 32 A 437 GLY VAL LEU ALA GLN LEU ILE TRP SER ARG ALA LEU GLY SEQRES 33 A 437 PHE PRO LEU GLU ARG PRO LYS SER MET SER THR ALA GLY SEQRES 34 A 437 LEU GLU LYS LEU SER ALA GLY GLY
HET OAA A 702 9 HET HAX A 700 52
HETNAM OAA OXALOACETATE ION HETNAM HAX N-HYDROXYAMIDOCARBOXYMETHYLDETHIA COENZYME *A
FORMUL 2 OAA C4 H3 O5 1- FORMUL 3 HAX C23 H39 N8 O18 P3 FORMUL 4 HOH *143(H2 O)
HELIX 1 1 LEU A 6 HIS A 28 1 23 HELIX 2 2 VAL A 38 TYR A 42 1 5 HELIX 3 3 ILE A 71 LEU A 77 1 7 HELIX 4 4 PRO A 89 THR A 98 1 10 HELIX 5 5 PRO A 104 ARG A 117 1 14 HELIX 6 6 SER A 122 ASN A 130 1 9 HELIX 7 7 PRO A 137 GLU A 151 1 15 HELIX 8 8 ASN A 153 GLU A 160 1 8 HELIX 9 9 ARG A 164 TYR A 194 5 31 HELIX 10 10 TRP A 209 LEU A 217 1 9 HELIX 11 11 PRO A 222 ILE A 234 1 13 HELIX 12 12 VAL A 243 ALA A 254 1 12 HELIX 13 13 PRO A 258 LEU A 269 1 12 HELIX 14 14 GLY A 275 ASP A 291 5 17 HELIX 15 15 ASP A 298 SER A 311 1 14 HELIX 16 16 PRO A 328 HIS A 340 1 13 HELIX 17 17 PRO A 345 GLN A 364 1 20 HELIX 18 18 VAL A 374 TYR A 385 5 12 HELIX 19 19 MET A 390 ALA A 414 5 25 HELIX 20 20 THR A 427 SER A 434 1 8
SHEET 1 A 2 SER A 56 ASP A 59 0 SHEET 2 A 2 GLY A 63 PHE A 66 -1 N ARG A 65 O VAL A 57
SITE 1 ACT 3 HIS A 274 HIS A 320 ASP A 375 SITE 1 AC1 10 HIS A 238 ASN A 242 HIS A 274 HIS A 320 SITE 2 AC1 10 ARG A 329 ARG A 401 ARG A 421 HOH A 584 SITE 3 AC1 10 HOH A 586 HAX A 700 SITE 1 AC2 26 ARG A 46 ARG A 164 LEU A 273 HIS A 274 SITE 2 AC2 26 GLY A 275 ALA A 277 LEU A 309 VAL A 314 SITE 3 AC2 26 VAL A 315 GLY A 317 TYR A 318 GLY A 319 SITE 4 AC2 26 HIS A 320 ALA A 321 LYS A 366 ALA A 367 SITE 5 AC2 26 LYS A 368 ASN A 373 ASP A 375 PHE A 397 SITE 6 AC2 26 HOH A 539 HOH A 547 HOH A 585 HOH A 603 SITE 7 AC2 26 HOH A 623 OAA A 702
CRYST1 104.430 78.480 58.450 90.00 78.89 90.00 C 1 2 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009576 0.000000 -0.001880 0.00000
SCALE2 0.000000 0.012742 0.000000 0.00000
SCALE3 0.000000 0.000000 0.017435 0.00000