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   Search term(s): GO:0045944

Here you see a subgraph of the complete GO graph, with your query GO:0045944 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

• positive regulation of transcription by RNA polymerase II (GO:0045944)
  [6300 PDB entries]
  
  
• carbon catabolite activation of transcription from RNA polymerase II promoter (GO:0000436)
  [8 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source (GO:0061414)
• positive regulation of transcription from RNA polymerase II promoter by galactose (GO:0000435)
  [156 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter by glucose (GO:0000432)
  [1 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter by oleic acid (GO:0061429)
  [6 PDB entries]
  
  
• positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900422)
• positive regulation of central gap gene transcription (GO:0007357)
• positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter (GO:1900404)
• positive regulation of ergosterol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:0035961)
  [3 PDB entries]
  
  
• positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter (GO:0061425)
  [6 PDB entries]
  
  
• positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by positive regulation of transcription from RNA polymerase II promoter (GO:1904741)
  [1 PDB entries]
  
  
• positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter (GO:1900524)
• positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter (GO:0035948)
  [98 PDB entries]
  
  
• positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900375)
• positive regulation of invasive growth in response to glucose limitation by positive regulation of transcription from RNA polymerase II promoter (GO:0036095)
• positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter (GO:1900423)
• positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter (GO:0035951)
  • positive regulation of dipeptide transport by positive regulation of transcription from RNA polymerase II promoter (GO:0035954)
• positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter (GO:0061424)
  [6 PDB entries]
  
  
• positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900413)
  [2 PDB entries]
  
  
• positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900472)
• positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900525)
• positive regulation of posterior gap gene transcription (GO:0007360)
• positive regulation of pri-miRNA transcription by RNA polymerase II (GO:1902895)
  [64 PDB entries]
  
  
• positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter (GO:1900461)
• positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900418)
• positive regulation of pyrimidine-containing compound salvage by positive regulation of transcription from RNA polymerase II promoter (GO:1904001)
• positive regulation of ribosomal protein gene transcription by RNA polymerase II (GO:0060963)
• positive regulation of snRNA transcription by RNA polymerase II (GO:1905382)
• positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter (GO:0061423)
• positive regulation of SREBP signaling pathway (GO:2000640)
  [3 PDB entries]
  
  
• positive regulation of SREBP signaling pathway in response to decreased oxygen levels (GO:0038176)
• positive regulation of sterol regulatory element binding protein cleavage (GO:1901310)
• positive regulation of starch catabolic process by positive regulation of transcription from RNA polymerase II promoter (GO:0035957)
• positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter (GO:1900478)
• positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter (GO:0061426)
• positive regulation of telomeric RNA transcription from RNA pol II promoter (GO:1901582)
  [8 PDB entries]
  
  
• positive regulation of terminal gap gene transcription (GO:0007363)
• positive regulation of termination of RNA polymerase II transcription (GO:1904595)
  [1 PDB entries]
  
  
• positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled (GO:2000806)
• positive regulation of transcription elongation from RNA polymerase II promoter (GO:0032968)
  [375 PDB entries]
  
  
• phosphorylation of RNA polymerase II C-terminal domain serine 2 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter (GO:1903655)
• phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter (GO:1903654)
• positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling (GO:1900622)
• positive regulation of transcription from RNA polymerase II promoter by histone modification (GO:1903757)
• positive regulation of transcription from RNA polymerase II promoter in response to acidic pH (GO:0061402)
  [48 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvation (GO:0036278)
  [1 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to stress (GO:0036003)
  [22 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to alkaline pH (GO:0061422)
• positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation (GO:0061412)
  [6 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (GO:0061395)
  [1 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to cold (GO:0061411)
  • positive regulation of transcription from RNA polymerase II promoter in response to freezing (GO:0061409)
• positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress (GO:1990440)
  [188 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to glucose starvation (GO:0061406)
• positive regulation of transcription from RNA polymerase II promoter in response to heat stress (GO:0061408)
  [5 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to hydrostatic pressure (GO:0061405)
• positive regulation of transcription from RNA polymerase II promoter in response to hypoxia (GO:0061419)
  [108 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation (GO:0036086)
  [1 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to menadione (GO:0036252)
  [1 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to nitrosative stress (GO:0061403)
• positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress (GO:0061393)
  • positive regulation of transcription from RNA polymerase II promoter in response to a hypotonic environment (GO:0061401)
  • positive regulation of transcription from RNA polymerase II promoter in response to salt stress (GO:0036251)
• positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress (GO:0036091)
  [26 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide (GO:0061407)
• positive regulation of transcription from RNA polymerase II promoter in response to reactive oxygen species (GO:1990095)
• positive regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation (GO:0097236)
  [1 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus (GO:1901522)
  [119 PDB entries]
  
  
• positive regulation of SREBP signaling pathway in response to decreased oxygen levels (GO:0038176)
• positive regulation of transcription from RNA polymerase II promoter by pheromones (GO:0007329)
  [14 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (GO:0061395)
  [1 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to calcium ion (GO:0061400)
• positive regulation of transcription from RNA polymerase II promoter in response to cobalt ion (GO:0061399)
• positive regulation of transcription from RNA polymerase II promoter in response to copper ion (GO:0061397)
• positive regulation of transcription from RNA polymerase II promoter in response to ethanol (GO:0061410)
  [6 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to hydrostatic pressure (GO:0061405)
• positive regulation of transcription from RNA polymerase II promoter in response to hypoxia (GO:0061419)
  [108 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to iron (GO:0010723)
• positive regulation of transcription from RNA polymerase II promoter in response to maltose (GO:1904765)
• positive regulation of transcription from RNA polymerase II promoter in response to menadione (GO:0036252)
  [1 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to methylglyoxal (GO:0097239)
• positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress (GO:0036091)
  [26 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide (GO:0061407)
• positive regulation of transcription from RNA polymerase II promoter in response to reactive oxygen species (GO:1990095)
• positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response (GO:0006990)
  [20 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus (GO:1901244)
• positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium (GO:1902097)
• positive regulation of transcription from RNA polymerase II promoter involved in heart development (GO:1901228)
  [3 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation (GO:0003257)
  [4 PDB entries]
  
  
• positive regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (GO:0010673)
• positive regulation of transcription from RNA polymerase II promoter involved in neuron differentiation (GO:1904081)
  • positive regulation of transcription from RNA polymerase II promoter involved in neuron fate specification (GO:1904080)
• positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process (GO:2000763)
• positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation (GO:2000721)
• positive regulation of transcription from RNA polymerase II promoter involved in stress response to cadmium ion (GO:1902901)
• positive regulation of transcription initiation from RNA polymerase II promoter (GO:0060261)
  [189 PDB entries]
  
  
• positive regulation of RNA polymerase II transcriptional preinitiation complex assembly (GO:0045899)
  [209 PDB entries]
  
  
• positive regulation of transcription involved in G2/M transition of mitotic cell cycle (GO:0090282)
  [1 PDB entries]
  
  
• positive regulation of transcription of Notch receptor target (GO:0007221)
  [40 PDB entries]
  
  
• positive regulation of transcription via serum response element binding (GO:0010735)
  [13 PDB entries]
  
  
• regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter (GO:0072366)
  [18 PDB entries]
  
  
• positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900466)
  [1 PDB entries]
  
  
• positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter (GO:0097235)
  [6 PDB entries]
  
  
• positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter (GO:0035959)
• positive regulation of unsaturated fatty acid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:0036083)
• regulation of glycolytic process by positive regulation of transcription from RNA polymerase II promoter (GO:0072363)
  [35 PDB entries]
  
  
• regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter (GO:0072369)
  [23 PDB entries]
  
  
• positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter (GO:0035969)
  [1 PDB entries]
  
  
• regulation of potassium ion concentration by positive regulation of transcription from RNA polymerase II promoter (GO:0097301)
• regulation of reactive oxygen species metabolic process by positive regulation of transcription from RNA polymerase II promoter (GO:1904488)
• SREBP signaling pathway (GO:0032933)
  [10 PDB entries]
  
  
• negative regulation of SREBP signaling pathway (GO:2000639)
  [4 PDB entries]
  
  
• negative regulation of SREBP signaling pathway in response to increased oxygen levels (GO:0038175)
• negative regulation of sterol regulatory element binding protein cleavage (GO:1901309)
• SREBP-SCAP complex retention in endoplasmic reticulum (GO:0036316)
• positive regulation of SREBP signaling pathway (GO:2000640)
  [3 PDB entries]
  
  
• positive regulation of SREBP signaling pathway in response to decreased oxygen levels (GO:0038176)
• positive regulation of sterol regulatory element binding protein cleavage (GO:1901310)
• regulation of SREBP signaling pathway (GO:2000638)
  • negative regulation of SREBP signaling pathway (GO:2000639)
    [4 PDB entries]
    
    
  • negative regulation of SREBP signaling pathway in response to increased oxygen levels (GO:0038175)
  • negative regulation of sterol regulatory element binding protein cleavage (GO:1901309)
  • SREBP-SCAP complex retention in endoplasmic reticulum (GO:0036316)
  • positive regulation of SREBP signaling pathway (GO:2000640)
    [3 PDB entries]
    
    
  • positive regulation of SREBP signaling pathway in response to decreased oxygen levels (GO:0038176)
  • positive regulation of sterol regulatory element binding protein cleavage (GO:1901310)
  • regulation of sterol regulatory element binding protein cleavage (GO:1901308)
• sterol regulatory element binding protein cleavage (GO:0035103)
  [6 PDB entries]
  
  
• negative regulation of sterol regulatory element binding protein cleavage (GO:1901309)
• positive regulation of sterol regulatory element binding protein cleavage (GO:1901310)
• regulation of sterol regulatory element binding protein cleavage (GO:1901308)
• transcriptional activation by promoter-enhancer looping (GO:0071733)
  [13 PDB entries]
  
  
• transcriptional activation by promoter-terminator looping (GO:0090203)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019