GO2PDB - JenaLib

Search term(s): GO:0072080

Here you see a subgraph of the complete GO graph, with your query GO:0072080 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

nephron tubule development (GO:0072080)
- ascending thin limb development (GO:0072021)
  - metanephric ascending thin limb development (GO:0072218)
    [12 PDB entries]
- connecting tubule development (GO:0072027)
  - mesonephric connecting tubule development (GO:0061272)
    - specification of mesonephric connecting tubule identity (GO:0061281)
  - metanephric connecting tubule development (GO:0072286)
    [2 PDB entries]
  - specification of connecting tubule identity (GO:0072085)
    - specification of mesonephric connecting tubule identity (GO:0061281)
    - specification of metanephric connecting tubule identity (GO:0072294)
- distal convoluted tubule development (GO:0072025)
  - DCT cell differentiation (GO:0072069)
    - DCT cell development (GO:0072140)
    - DCT cell fate commitment (GO:0072146)
    - metanephric DCT cell differentiation (GO:0072240)
  - early distal convoluted tubule development (GO:0072067)
    - metanephric early distal convoluted tubule development (GO:0072222)
  - late distal convoluted tubule development (GO:0072068)
    - metanephric late distal convoluted tubule development (GO:0072225)
  - metanephric distal convoluted tubule development (GO:0072221)
    [4 PDB entries]
- distal tubule development (GO:0072017)
  [41 PDB entries]
- loop of Henle development (GO:0072070)
  [8 PDB entries]
- mesonephric nephron tubule development (GO:0061242)
  - mesonephric connecting tubule development (GO:0061272)
    - specification of mesonephric connecting tubule identity (GO:0061281)
  - mesonephric distal tubule development (GO:0061274)
    - mesonephric distal tubule morphogenesis (GO:0061273)
  - mesonephric nephron tubule epithelial cell differentiation (GO:0061265)
    - negative regulation of mesonephric nephron tubule epithelial cell differentiation (GO:2000094)
    - regulation of mesonephric nephron tubule epithelial cell differentiation (GO:2000093)
  - mesonephric nephron tubule morphogenesis (GO:0061240)
    - epithelial cell migration involved in mesonephric nephron tubule morphogenesis (GO:0061278)
    - mesonephric distal tubule morphogenesis (GO:0061273)
    - mesonephric nephron tubule formation (GO:0061277)
    - mesonephric proximal tubule morphogenesis (GO:0061276)
  - mesonephric proximal tubule development (GO:0061275)
    - mesonephric proximal tubule morphogenesis (GO:0061276)
- metanephric nephron tubule development (GO:0072234)
  - apoptotic process involved in metanephric nephron tubule development (GO:1900205)
    - negative regulation of apoptotic process involved in metanephric nephron tubule development (GO:1900218)
      [1 PDB entries]
    - positive regulation of apoptotic process involved in metanephric nephron tubule development (GO:1900219)
    - regulation of apoptotic process involved in metanephric nephron tubule development (GO:1900217)
  - metanephric ascending thin limb development (GO:0072218)
    [12 PDB entries]
  - metanephric connecting tubule development (GO:0072286)
    [2 PDB entries]
  - metanephric distal convoluted tubule development (GO:0072221)
    [4 PDB entries]
  - metanephric distal tubule development (GO:0072235)
    [10 PDB entries]
  - metanephric loop of Henle development (GO:0072236)
    - metanephric ascending thin limb development (GO:0072218)
      [12 PDB entries]
    - metanephric descending thin limb development (GO:0072220)
      [1 PDB entries]
    - specification of metanephric loop of Henle identity (GO:0072296)
  - metanephric nephron tubule epithelial cell differentiation (GO:0072257)
    - negative regulation of metanephric nephron tubule epithelial cell differentiation (GO:0072308)
      [4 PDB entries]
    - regulation of metanephric nephron tubule epithelial cell differentiation (GO:0072307)
      [21 PDB entries]
  - metanephric nephron tubule morphogenesis (GO:0072282)
    [4 PDB entries]
  - metanephric proximal convoluted tubule development (GO:0072229)
    [7 PDB entries]
  - metanephric proximal straight tubule development (GO:0072230)
    [1 PDB entries]
  - metanephric proximal tubule development (GO:0072237)
    [1 PDB entries]
  - metanephric thick ascending limb development (GO:0072233)
    [1 PDB entries]
- nephron tubule epithelial cell differentiation (GO:0072160)
  [3 PDB entries]
- nephron tubule morphogenesis (GO:0072078)
  - distal tubule morphogenesis (GO:0072156)
    [5 PDB entries]
  - epithelial cell migration involved in nephron tubule morphogenesis (GO:0072155)
    - epithelial cell migration involved in distal tubule morphogenesis (GO:0072157)
    - epithelial cell migration involved in mesonephric nephron tubule morphogenesis (GO:0061278)
    - epithelial cell migration involved in metanephric nephron tubule morphogenesis (GO:0072290)
    - epithelial cell migration involved in proximal tubule morphogenesis (GO:0072159)
  - mesonephric tubule morphogenesis (GO:0072171)
    - mesonephric duct morphogenesis (GO:0072180)
    - mesonephric nephron tubule morphogenesis (GO:0061240)
      - epithelial cell migration involved in mesonephric nephron tubule morphogenesis (GO:0061278)
      - mesonephric distal tubule morphogenesis (GO:0061273)
      - mesonephric nephron tubule formation (GO:0061277)
      - mesonephric proximal tubule morphogenesis (GO:0061276)
    - mesonephric tubule formation (GO:0072172)
      [1 PDB entries]
    - ureteric bud morphogenesis (GO:0060675)
      [4 PDB entries]
  - metanephric nephron tubule morphogenesis (GO:0072282)
    [4 PDB entries]
  - nephron tubule formation (GO:0072079)
    [34 PDB entries]
  - pronephric nephron tubule morphogenesis (GO:0039008)
    [1 PDB entries]
  - proximal tubule morphogenesis (GO:0072158)
    - epithelial cell migration involved in proximal tubule morphogenesis (GO:0072159)
    - mesonephric proximal tubule morphogenesis (GO:0061276)
    - metanephric proximal tubule morphogenesis (GO:0072288)
    - pronephric proximal tubule morphogenesis (GO:0039011)
    - specification of proximal tubule identity (GO:0072082)
- pronephric nephron tubule development (GO:0039020)
  [3 PDB entries]
- proximal convoluted tubule development (GO:0072019)
  - metanephric proximal convoluted tubule development (GO:0072229)
    [7 PDB entries]
  - proximal convoluted tubule segment 1 development (GO:0072031)
    - metanephric proximal convoluted tubule segment 1 development (GO:0072231)
    - proximal convoluted tubule segment 1 cell differentiation (GO:0072062)
  - proximal convoluted tubule segment 2 development (GO:0072032)
    - metanephric proximal convoluted tubule segment 2 development (GO:0072232)
      [1 PDB entries]
- proximal straight tubule development (GO:0072020)
  - metanephric proximal straight tubule development (GO:0072230)
    [1 PDB entries]
- proximal tubule development (GO:0072014)
  [1 PDB entries]
- thick ascending limb development (GO:0072023)
  - metanephric thick ascending limb development (GO:0072233)
    [1 PDB entries]

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019