load pdb inline background [255,255,255] color cpk select ligand cpk select not ligand wireframe 40 select selected and not bonded cpk 40 select ( protein and carbon and *.CA ) or ( nucleic and *.C5* ) label "%n %r" color label black select not ( HYDROGEN or CARBON or NITROGEN or OXYGEN or PHOSPHORUS or SULPHUR ) label "%e" select carbon color green select phosphorus color magenta select not bonded cpk select all show info exit LINK C SEP A 346 N ARG A 347 1555 1555 1.35 LINK C SEP B 346 N ARG B 347 1555 1555 1.33 LINK C SEP C 346 N ARG C 347 1555 1555 1.35 LINK C SEP D 346 N ARG D 347 1555 1555 1.36 HETATM 1406 N SEP A 346 40.526 31.449 -21.232 1.00 83.85 N HETATM 1407 CA SEP A 346 39.451 32.437 -21.172 1.00 84.62 C HETATM 1408 CB SEP A 346 39.150 33.073 -22.513 1.00 87.94 C HETATM 1409 OG SEP A 346 39.055 32.051 -23.542 1.00 91.00 O HETATM 1410 C SEP A 346 38.207 31.824 -20.531 1.00 85.58 C HETATM 1411 O SEP A 346 37.298 32.558 -20.127 1.00 85.23 O HETATM 1412 P SEP A 346 38.767 32.705 -24.937 1.00 93.23 P HETATM 1413 O1P SEP A 346 38.625 31.556 -25.948 1.00 93.51 O HETATM 1414 O2P SEP A 346 39.956 33.589 -25.383 1.00 93.52 O HETATM 1415 O3P SEP A 346 37.470 33.569 -24.904 1.00 93.30 O HETATM 3712 N SEP B 346 -8.108 -32.224 47.213 1.00 79.04 N HETATM 3713 CA SEP B 346 -8.291 -33.289 46.220 1.00 79.63 C HETATM 3714 CB SEP B 346 -9.658 -33.982 46.398 1.00 83.16 C HETATM 3715 OG SEP B 346 -10.709 -32.975 46.548 1.00 86.97 O HETATM 3716 C SEP B 346 -8.058 -32.696 44.810 1.00 80.33 C HETATM 3717 O SEP B 346 -7.982 -33.411 43.805 1.00 80.53 O HETATM 3718 P SEP B 346 -12.121 -33.612 46.590 1.00 90.34 P HETATM 3719 O1P SEP B 346 -12.492 -34.204 45.185 1.00 90.37 O HETATM 3720 O2P SEP B 346 -13.130 -32.466 46.898 1.00 90.22 O HETATM 3721 O3P SEP B 346 -12.183 -34.671 47.730 1.00 90.16 O HETATM 6017 N SEP C 346 45.081 -34.617 4.270 1.00 66.83 N HETATM 6018 CA SEP C 346 45.189 -35.656 5.295 1.00 69.46 C HETATM 6019 CB SEP C 346 46.500 -36.434 5.216 1.00 75.13 C HETATM 6020 OG SEP C 346 47.613 -35.525 5.032 1.00 80.30 O HETATM 6021 C SEP C 346 44.973 -35.059 6.687 1.00 71.25 C HETATM 6022 O SEP C 346 44.711 -35.808 7.632 1.00 71.50 O HETATM 6023 P SEP C 346 48.980 -36.244 4.921 1.00 84.52 P HETATM 6024 O1P SEP C 346 48.984 -37.212 3.704 1.00 85.13 O HETATM 6025 O2P SEP C 346 50.067 -35.181 4.675 1.00 84.37 O HETATM 6026 O3P SEP C 346 49.258 -37.000 6.252 1.00 84.82 O HETATM 8328 N SEP D 346 16.944 34.074 43.182 1.00 73.09 N HETATM 8329 CA SEP D 346 17.961 35.114 43.026 1.00 74.89 C HETATM 8330 CB SEP D 346 18.313 35.827 44.338 1.00 80.06 C HETATM 8331 OG SEP D 346 18.433 34.859 45.411 1.00 84.99 O HETATM 8332 C SEP D 346 19.213 34.540 42.364 1.00 75.00 C HETATM 8333 O SEP D 346 20.022 35.309 41.846 1.00 74.37 O HETATM 8334 P SEP D 346 18.749 35.476 46.795 1.00 88.71 P HETATM 8335 O1P SEP D 346 20.199 36.037 46.726 1.00 89.09 O HETATM 8336 O2P SEP D 346 18.707 34.384 47.871 1.00 88.56 O HETATM 8337 O3P SEP D 346 17.655 36.532 47.164 1.00 88.96 O