load pdb inline background [255,255,255] color cpk select ligand cpk select not ligand wireframe 40 select selected and not bonded cpk 40 select ( protein and carbon and *.CA ) or ( nucleic and *.C5* ) label "%n %r" color label black select not ( HYDROGEN or CARBON or NITROGEN or OXYGEN or PHOSPHORUS or SULPHUR ) label "%e" select carbon color green select phosphorus color magenta select not bonded cpk select all show info exit LINK O3B GDP A 201 MG MG A 202 1555 1555 2.03 LINK O3B GDP B 201 MG MG B 202 1555 1555 2.18 LINK O3B GDP C 201 MG MG C 202 1555 1555 2.09 LINK O3B GDP D 201 MG MG D 202 1555 1555 2.00 HETATM 5194 PB GDP A 201 13.753 3.990 13.819 1.00 20.56 P HETATM 5195 O1B GDP A 201 13.803 5.393 14.270 1.00 21.44 O HETATM 5196 O2B GDP A 201 12.406 3.655 13.006 1.00 20.41 O HETATM 5197 O3B GDP A 201 14.946 3.606 12.835 1.00 18.07 O HETATM 5198 O3A GDP A 201 13.755 2.929 15.048 1.00 18.95 O HETATM 5199 PA GDP A 201 15.074 2.392 15.814 1.00 17.62 P HETATM 5200 O1A GDP A 201 15.555 1.131 15.188 1.00 18.02 O HETATM 5201 O2A GDP A 201 16.030 3.508 16.011 1.00 18.86 O HETATM 5202 O5' GDP A 201 14.390 2.017 17.220 1.00 16.64 O HETATM 5203 C5' GDP A 201 13.764 3.031 18.008 1.00 18.61 C HETATM 5204 C4' GDP A 201 13.570 2.592 19.470 1.00 19.18 C HETATM 5205 O4' GDP A 201 12.729 1.411 19.556 1.00 18.45 O HETATM 5206 C3' GDP A 201 14.899 2.206 20.095 1.00 21.44 C HETATM 5207 O3' GDP A 201 14.807 2.419 21.516 1.00 21.72 O HETATM 5208 C2' GDP A 201 14.973 0.716 19.808 1.00 20.80 C HETATM 5209 O2' GDP A 201 15.792 0.084 20.796 1.00 21.15 O HETATM 5210 C1' GDP A 201 13.529 0.301 20.028 1.00 17.82 C HETATM 5211 N9 GDP A 201 13.131 -0.909 19.258 1.00 19.30 N HETATM 5212 C8 GDP A 201 13.219 -1.105 17.918 1.00 20.09 C HETATM 5213 N7 GDP A 201 12.675 -2.294 17.609 1.00 17.95 N HETATM 5214 C5 GDP A 201 12.195 -2.840 18.736 1.00 16.64 C HETATM 5215 C6 GDP A 201 11.503 -4.025 19.021 1.00 19.04 C HETATM 5216 O6 GDP A 201 11.196 -4.849 18.141 1.00 19.17 O HETATM 5217 N1 GDP A 201 11.128 -4.273 20.332 1.00 18.90 N HETATM 5218 C2 GDP A 201 11.445 -3.354 21.339 1.00 21.07 C HETATM 5219 N2 GDP A 201 11.094 -3.606 22.598 1.00 18.95 N HETATM 5220 N3 GDP A 201 12.095 -2.218 21.038 1.00 20.42 N HETATM 5221 C4 GDP A 201 12.476 -1.949 19.774 1.00 19.40 C HETATM 5225 PB GDP B 201 11.219 -11.164 47.441 1.00 18.82 P HETATM 5226 O1B GDP B 201 11.121 -12.641 47.288 1.00 13.59 O HETATM 5227 O2B GDP B 201 12.592 -10.549 46.860 1.00 16.38 O HETATM 5228 O3B GDP B 201 10.050 -10.398 46.699 1.00 17.46 O HETATM 5229 O3A GDP B 201 11.208 -10.745 49.005 1.00 16.44 O HETATM 5230 PA GDP B 201 9.887 -10.479 49.874 1.00 15.73 P HETATM 5231 O1A GDP B 201 9.445 -9.074 49.689 1.00 16.26 O HETATM 5232 O2A GDP B 201 8.928 -11.573 49.641 1.00 17.67 O HETATM 5233 O5' GDP B 201 10.532 -10.601 51.345 1.00 14.93 O HETATM 5234 C5' GDP B 201 11.178 -11.822 51.706 1.00 14.48 C HETATM 5235 C4' GDP B 201 11.359 -11.889 53.209 1.00 17.15 C HETATM 5236 O4' GDP B 201 12.184 -10.774 53.619 1.00 20.06 O HETATM 5237 C3' GDP B 201 10.004 -11.725 53.895 1.00 15.35 C HETATM 5238 O3' GDP B 201 9.985 -12.563 55.065 1.00 20.40 O HETATM 5239 C2' GDP B 201 9.967 -10.236 54.248 1.00 16.49 C HETATM 5240 O2' GDP B 201 9.184 -9.992 55.437 1.00 17.28 O HETATM 5241 C1' GDP B 201 11.434 -9.964 54.543 1.00 17.30 C HETATM 5242 N9 GDP B 201 11.819 -8.562 54.252 1.00 18.27 N HETATM 5243 C8 GDP B 201 11.709 -7.902 53.079 1.00 19.33 C HETATM 5244 N7 GDP B 201 12.255 -6.681 53.211 1.00 16.42 N HETATM 5245 C5 GDP B 201 12.739 -6.587 54.454 1.00 17.86 C HETATM 5246 C6 GDP B 201 13.400 -5.577 55.149 1.00 19.06 C HETATM 5247 O6 GDP B 201 13.669 -4.499 54.615 1.00 17.27 O HETATM 5248 N1 GDP B 201 13.767 -5.805 56.469 1.00 18.32 N HETATM 5249 C2 GDP B 201 13.479 -7.025 57.068 1.00 18.75 C HETATM 5250 N2 GDP B 201 13.819 -7.234 58.332 1.00 19.37 N HETATM 5251 N3 GDP B 201 12.826 -7.979 56.377 1.00 18.10 N HETATM 5252 C4 GDP B 201 12.472 -7.787 55.099 1.00 17.43 C HETATM 5255 PB GDP C 201 -2.884 -28.849 29.334 1.00 17.17 P HETATM 5256 O1B GDP C 201 -2.888 -27.393 29.059 1.00 20.01 O HETATM 5257 O2B GDP C 201 -1.579 -29.312 30.137 1.00 19.94 O HETATM 5258 O3B GDP C 201 -4.150 -29.316 30.193 1.00 15.74 O HETATM 5259 O3A GDP C 201 -2.905 -29.703 27.952 1.00 17.91 O HETATM 5260 PA GDP C 201 -4.256 -30.197 27.199 1.00 19.62 P HETATM 5261 O1A GDP C 201 -4.752 -31.444 27.850 1.00 17.74 O HETATM 5262 O2A GDP C 201 -5.190 -29.067 27.048 1.00 22.44 O HETATM 5263 O5' GDP C 201 -3.681 -30.550 25.740 1.00 18.44 O HETATM 5264 C5' GDP C 201 -2.838 -29.607 25.078 1.00 18.46 C HETATM 5265 C4' GDP C 201 -2.745 -29.867 23.572 1.00 20.32 C HETATM 5266 O4' GDP C 201 -1.885 -31.002 23.335 1.00 22.75 O HETATM 5267 C3' GDP C 201 -4.113 -30.245 23.003 1.00 17.74 C HETATM 5268 O3' GDP C 201 -4.150 -29.927 21.601 1.00 20.20 O HETATM 5269 C2' GDP C 201 -4.149 -31.748 23.193 1.00 20.08 C HETATM 5270 O2' GDP C 201 -4.969 -32.349 22.189 1.00 18.22 O HETATM 5271 C1' GDP C 201 -2.714 -32.105 22.897 1.00 22.39 C HETATM 5272 N9 GDP C 201 -2.290 -33.310 23.626 1.00 20.99 N HETATM 5273 C8 GDP C 201 -2.382 -33.561 24.953 1.00 23.09 C HETATM 5274 N7 GDP C 201 -1.807 -34.741 25.208 1.00 20.79 N HETATM 5275 C5 GDP C 201 -1.343 -35.225 24.049 1.00 20.38 C HETATM 5276 C6 GDP C 201 -0.639 -36.361 23.716 1.00 20.43 C HETATM 5277 O6 GDP C 201 -0.348 -37.205 24.568 1.00 21.43 O HETATM 5278 N1 GDP C 201 -0.269 -36.554 22.386 1.00 22.28 N HETATM 5279 C2 GDP C 201 -0.603 -35.610 21.422 1.00 22.26 C HETATM 5280 N2 GDP C 201 -0.264 -35.810 20.142 1.00 20.86 N HETATM 5281 N3 GDP C 201 -1.268 -34.497 21.783 1.00 22.21 N HETATM 5282 C4 GDP C 201 -1.634 -34.298 23.061 1.00 20.48 C HETATM 5285 PB GDP D 201 -0.012 -44.542 -4.062 1.00 18.92 P HETATM 5286 O1B GDP D 201 0.007 -45.994 -3.820 1.00 16.25 O HETATM 5287 O2B GDP D 201 -1.372 -43.892 -3.531 1.00 18.04 O HETATM 5288 O3B GDP D 201 1.179 -43.766 -3.358 1.00 17.29 O HETATM 5289 O3A GDP D 201 0.030 -44.199 -5.639 1.00 18.63 O HETATM 5290 PA GDP D 201 1.366 -43.895 -6.487 1.00 20.97 P HETATM 5291 O1A GDP D 201 1.714 -42.457 -6.351 1.00 20.69 O HETATM 5292 O2A GDP D 201 2.395 -44.935 -6.231 1.00 21.25 O HETATM 5293 O5' GDP D 201 0.766 -44.102 -7.952 1.00 19.64 O HETATM 5294 C5' GDP D 201 0.178 -45.356 -8.305 1.00 21.69 C HETATM 5295 C4' GDP D 201 0.201 -45.560 -9.813 1.00 22.78 C HETATM 5296 O4' GDP D 201 -0.642 -44.574 -10.441 1.00 23.88 O HETATM 5297 C3' GDP D 201 1.614 -45.342 -10.345 1.00 23.98 C HETATM 5298 O3' GDP D 201 1.810 -46.209 -11.471 1.00 23.04 O HETATM 5299 C2' GDP D 201 1.597 -43.876 -10.758 1.00 24.63 C HETATM 5300 O2' GDP D 201 2.508 -43.645 -11.843 1.00 25.79 O HETATM 5301 C1' GDP D 201 0.176 -43.709 -11.258 1.00 24.38 C HETATM 5302 N9 GDP D 201 -0.315 -42.308 -11.062 1.00 23.17 N HETATM 5303 C8 GDP D 201 -0.313 -41.592 -9.911 1.00 21.99 C HETATM 5304 N7 GDP D 201 -0.909 -40.418 -10.130 1.00 19.44 N HETATM 5305 C5 GDP D 201 -1.313 -40.389 -11.400 1.00 21.84 C HETATM 5306 C6 GDP D 201 -1.974 -39.439 -12.161 1.00 20.02 C HETATM 5307 O6 GDP D 201 -2.329 -38.375 -11.674 1.00 19.93 O HETATM 5308 N1 GDP D 201 -2.276 -39.728 -13.485 1.00 20.18 N HETATM 5309 C2 GDP D 201 -1.886 -40.938 -14.042 1.00 23.50 C HETATM 5310 N2 GDP D 201 -2.164 -41.193 -15.328 1.00 23.51 N HETATM 5311 N3 GDP D 201 -1.249 -41.849 -13.285 1.00 23.37 N HETATM 5312 C4 GDP D 201 -0.952 -41.593 -11.988 1.00 22.68 C