load pdb inline background [255,255,255] color cpk select ligand cpk select not ligand wireframe 40 select selected and not bonded cpk 40 select ( protein and carbon and *.CA ) or ( nucleic and *.C5* ) label "%n %r" color label black select not ( HYDROGEN or CARBON or NITROGEN or OXYGEN or PHOSPHORUS or SULPHUR ) label "%e" select carbon color green select phosphorus color magenta select not bonded cpk select all show info exit LINK O3' 5CM A 8 P DG A 9 1555 1555 1.61 LINK O3' 5CM B 18 P DG B 19 1555 1555 1.60 HETATM 140 N1 5CM A 8 29.145 7.243 6.422 1.00 28.81 N HETATM 141 C2 5CM A 8 29.765 6.546 5.393 1.00 30.19 C HETATM 142 N3 5CM A 8 29.231 5.357 5.008 1.00 30.48 N HETATM 143 C4 5CM A 8 28.138 4.862 5.584 1.00 28.80 C HETATM 144 C5 5CM A 8 27.467 5.573 6.624 1.00 25.57 C HETATM 145 C5A 5CM A 8 26.187 5.065 7.266 1.00 21.09 C HETATM 146 C6 5CM A 8 28.007 6.748 7.006 1.00 24.89 C HETATM 147 O2 5CM A 8 30.756 6.997 4.822 1.00 25.75 O HETATM 148 N4 5CM A 8 27.733 3.654 5.224 1.00 25.36 N HETATM 149 C1' 5CM A 8 29.856 8.461 6.923 1.00 28.91 C HETATM 150 C2' 5CM A 8 29.525 9.774 6.215 1.00 30.35 C HETATM 151 C3' 5CM A 8 28.466 10.298 7.147 1.00 29.97 C HETATM 152 C4' 5CM A 8 29.134 10.010 8.472 1.00 25.78 C HETATM 153 O4' 5CM A 8 29.628 8.691 8.323 1.00 25.64 O HETATM 154 O3' 5CM A 8 28.395 11.714 6.989 1.00 35.10 O HETATM 155 C5' 5CM A 8 28.168 9.981 9.626 1.00 25.03 C HETATM 156 O5' 5CM A 8 27.110 9.063 9.359 1.00 22.67 O HETATM 157 P 5CM A 8 25.856 8.959 10.356 1.00 25.22 P HETATM 158 OP1 5CM A 8 25.536 10.316 10.849 1.00 29.02 O HETATM 159 OP2 5CM A 8 24.791 8.155 9.715 1.00 23.18 O HETATM 344 N1 5CM B 18 34.635 -5.651 18.695 1.00 30.85 N HETATM 345 C2 5CM B 18 34.052 -6.548 17.805 1.00 31.75 C HETATM 346 N3 5CM B 18 34.605 -6.677 16.567 1.00 32.46 N HETATM 347 C4 5CM B 18 35.683 -5.967 16.189 1.00 29.79 C HETATM 348 C5 5CM B 18 36.291 -5.044 17.091 1.00 27.61 C HETATM 349 C5A 5CM B 18 37.529 -4.250 16.711 1.00 26.14 C HETATM 350 C6 5CM B 18 35.739 -4.920 18.311 1.00 30.42 C HETATM 351 O2 5CM B 18 33.036 -7.180 18.099 1.00 33.79 O HETATM 352 N4 5CM B 18 36.174 -6.117 14.958 1.00 30.44 N HETATM 353 C1' 5CM B 18 34.018 -5.510 20.056 1.00 32.53 C HETATM 354 C2' 5CM B 18 34.404 -6.615 21.056 1.00 34.24 C HETATM 355 C3' 5CM B 18 35.572 -5.951 21.772 1.00 35.24 C HETATM 356 C4' 5CM B 18 34.983 -4.590 21.956 1.00 35.06 C HETATM 357 O4' 5CM B 18 34.370 -4.280 20.701 1.00 32.95 O HETATM 358 O3' 5CM B 18 35.664 -6.512 23.074 1.00 38.79 O HETATM 359 C5' 5CM B 18 35.943 -3.480 22.291 1.00 34.05 C HETATM 360 O5' 5CM B 18 36.894 -3.339 21.250 1.00 34.13 O HETATM 361 P 5CM B 18 37.780 -2.022 21.195 1.00 37.28 P HETATM 362 OP1 5CM B 18 38.211 -1.673 22.568 1.00 46.38 O HETATM 363 OP2 5CM B 18 38.786 -2.191 20.124 1.00 33.64 O