load pdb inline background [255,255,255] color cpk select ligand cpk select not ligand wireframe 40 select selected and not bonded cpk 40 select ( protein and carbon and *.CA ) or ( nucleic and *.C5* ) label "%n %r" color label black select not ( HYDROGEN or CARBON or NITROGEN or OXYGEN or PHOSPHORUS or SULPHUR ) label "%e" select carbon color green select phosphorus color magenta select not bonded cpk select all show info exit LINK O3' TM2 Y 34 P A Y 35 1555 1555 1.59 HETATM51820 P TM2 Y 34 203.055 105.560 6.657 1.00116.35 P HETATM51821 O1P TM2 Y 34 204.260 106.172 7.527 1.00116.95 O HETATM51822 O2P TM2 Y 34 202.447 106.854 5.879 1.00116.35 O HETATM51823 O5' TM2 Y 34 201.773 104.825 7.266 1.00115.17 O HETATM51824 C5' TM2 Y 34 201.404 104.958 8.653 1.00112.99 C HETATM51825 C4' TM2 Y 34 200.146 104.167 8.907 1.00111.19 C HETATM51826 O4' TM2 Y 34 199.048 104.765 8.135 1.00110.59 O HETATM51827 C1' TM2 Y 34 198.133 103.728 7.753 1.00110.61 C HETATM51828 N1 TM2 Y 34 198.013 103.672 6.246 1.00111.84 N HETATM51829 C6 TM2 Y 34 198.980 104.250 5.390 1.00112.91 C HETATM51830 C2 TM2 Y 34 196.887 103.011 5.688 1.00112.15 C HETATM51831 O2 TM2 Y 34 196.001 102.484 6.357 1.00112.19 O HETATM51832 N3 TM2 Y 34 196.847 102.995 4.298 1.00112.67 N HETATM51833 C4 TM2 Y 34 197.772 103.546 3.397 1.00113.89 C HETATM51834 O4 TM2 Y 34 197.543 103.415 2.194 1.00114.07 O HETATM51835 C5 TM2 Y 34 198.924 104.227 4.026 1.00114.30 C HETATM51836 C2' TM2 Y 34 198.680 102.431 8.361 1.00110.04 C HETATM51837 O2' TM2 Y 34 198.054 102.241 9.615 1.00109.66 O HETATM51838 C3' TM2 Y 34 200.164 102.753 8.385 1.00109.98 C HETATM51839 C7 TM2 Y 34 200.117 104.942 3.365 1.00115.66 C HETATM51840 N8 TM2 Y 34 200.853 104.471 2.038 1.00117.39 N HETATM51841 C9 TM2 Y 34 202.272 104.097 2.452 1.00119.20 C HETATM51842 C11 TM2 Y 34 202.526 103.090 1.330 1.00121.25 C HETATM51843 S12 TM2 Y 34 201.973 101.361 1.666 1.00122.63 S HETATM51844 O1S TM2 Y 34 203.045 100.577 2.307 1.00122.61 O HETATM51845 O2S TM2 Y 34 200.827 101.315 2.594 1.00122.45 O HETATM51846 O3' TM2 Y 34 201.015 101.845 9.162 1.00108.36 O HETATM51847 O3S TM2 Y 34 201.585 100.721 0.401 1.00123.10 O