load pdb inline background [255,255,255] color cpk select ligand cpk select not ligand wireframe 40 select selected and not bonded cpk 40 select ( protein and carbon and *.CA ) or ( nucleic and *.C5* ) label "%n %r" color label black select not ( HYDROGEN or CARBON or NITROGEN or OXYGEN or PHOSPHORUS or SULPHUR ) label "%e" select carbon color green select phosphorus color magenta select not bonded cpk select all show info exit LINK C ALY A 6 N ARG A 7 1555 1555 1.34 LINK C ALY A 9 N LYS A 10 1555 1555 1.32 MODEL 1 HETATM 62 OH ALY A 6 10.213 2.407 1.509 1.00 0.00 O HETATM 63 CH ALY A 6 10.290 1.248 1.102 1.00 0.00 C HETATM 64 CH3 ALY A 6 9.020 0.544 0.594 1.00 0.00 C HETATM 65 NZ ALY A 6 11.442 0.587 1.088 1.00 0.00 N HETATM 66 CE ALY A 6 12.712 1.151 1.540 1.00 0.00 C HETATM 67 CD ALY A 6 13.563 1.651 0.398 1.00 0.00 C HETATM 68 CG ALY A 6 14.682 2.570 0.888 1.00 0.00 C HETATM 69 CB ALY A 6 15.901 2.468 -0.022 1.00 0.00 C HETATM 70 CA ALY A 6 17.098 3.339 0.444 1.00 0.00 C HETATM 71 N ALY A 6 16.936 4.755 0.046 1.00 0.00 N HETATM 72 C ALY A 6 18.452 2.687 0.066 1.00 0.00 C HETATM 73 O ALY A 6 19.230 2.340 0.949 1.00 0.00 O HETATM 74 HH31 ALY A 6 8.151 1.113 0.889 1.00 0.00 H HETATM 75 HH32 ALY A 6 9.054 0.471 -0.494 1.00 0.00 H HETATM 76 HH33 ALY A 6 8.963 -0.446 1.021 1.00 0.00 H HETATM 77 HZ ALY A 6 11.447 -0.334 0.754 1.00 0.00 H HETATM 78 HE3 ALY A 6 12.526 1.964 2.206 1.00 0.00 H HETATM 79 HE2 ALY A 6 13.259 0.385 2.063 1.00 0.00 H HETATM 80 HD3 ALY A 6 13.983 0.804 -0.136 1.00 0.00 H HETATM 81 HD2 ALY A 6 12.936 2.206 -0.278 1.00 0.00 H HETATM 82 HG3 ALY A 6 14.325 3.590 0.878 1.00 0.00 H HETATM 83 HG2 ALY A 6 14.958 2.300 1.908 1.00 0.00 H HETATM 84 HB3 ALY A 6 16.184 1.427 -0.057 1.00 0.00 H HETATM 85 HB2 ALY A 6 15.607 2.771 -1.016 1.00 0.00 H HETATM 86 HCA ALY A 6 17.051 3.362 1.530 1.00 0.00 H HETATM 87 H ALY A 6 16.339 5.297 0.599 1.00 0.00 H HETATM 119 OH ALY A 9 11.789 -3.332 1.669 1.00 0.00 O HETATM 120 CH ALY A 9 12.507 -3.987 0.924 1.00 0.00 C HETATM 121 CH3 ALY A 9 12.972 -5.373 1.349 1.00 0.00 C HETATM 122 NZ ALY A 9 12.898 -3.540 -0.250 1.00 0.00 N HETATM 123 CE ALY A 9 12.526 -2.249 -0.802 1.00 0.00 C HETATM 124 CD ALY A 9 12.647 -2.285 -2.304 1.00 0.00 C HETATM 125 CG ALY A 9 14.091 -2.285 -2.707 1.00 0.00 C HETATM 126 CB ALY A 9 14.504 -3.539 -3.443 1.00 0.00 C HETATM 127 CA ALY A 9 15.970 -3.968 -3.241 1.00 0.00 C HETATM 128 N ALY A 9 16.670 -3.157 -2.225 1.00 0.00 N HETATM 129 C ALY A 9 16.690 -4.018 -4.582 1.00 0.00 C HETATM 130 O ALY A 9 17.332 -3.063 -5.018 1.00 0.00 O HETATM 131 HH31 ALY A 9 12.121 -5.964 1.644 1.00 0.00 H HETATM 132 HH32 ALY A 9 13.463 -5.844 0.511 1.00 0.00 H HETATM 133 HH33 ALY A 9 13.662 -5.288 2.173 1.00 0.00 H HETATM 134 HZ ALY A 9 13.471 -4.115 -0.799 1.00 0.00 H HETATM 135 HE3 ALY A 9 11.504 -2.027 -0.534 1.00 0.00 H HETATM 136 HE2 ALY A 9 13.187 -1.470 -0.414 1.00 0.00 H HETATM 137 HD3 ALY A 9 12.177 -3.171 -2.661 1.00 0.00 H HETATM 138 HD2 ALY A 9 12.168 -1.422 -2.722 1.00 0.00 H HETATM 139 HG3 ALY A 9 14.270 -1.454 -3.349 1.00 0.00 H HETATM 140 HG2 ALY A 9 14.687 -2.166 -1.824 1.00 0.00 H HETATM 141 HB3 ALY A 9 13.859 -4.347 -3.128 1.00 0.00 H HETATM 142 HB2 ALY A 9 14.350 -3.358 -4.499 1.00 0.00 H HETATM 143 HCA ALY A 9 15.946 -4.976 -2.863 1.00 0.00 H HETATM 144 H ALY A 9 17.024 -3.624 -1.436 1.00 0.00 H ENDMDL