load pdb inline background [255,255,255] color cpk select ligand cpk select not ligand wireframe 40 select selected and not bonded cpk 40 select ( protein and carbon and *.CA ) or ( nucleic and *.C5* ) label "%n %r" color label black select not ( HYDROGEN or CARBON or NITROGEN or OXYGEN or PHOSPHORUS or SULPHUR ) label "%e" select carbon color green select phosphorus color magenta select not bonded cpk select all show info exit LINK O3' 5MC D 40 P U D 41 1555 1555 1.61 LINK P 5MC D 49 O3' C D 48 1555 1555 1.61 LINK O3' 5MC D 49 P U D 50 1555 1555 1.60 LINK O3' 5MC E 40 P U E 41 1555 1555 1.60 LINK P 5MC E 49 O3' C E 48 1555 1555 1.62 LINK O3' 5MC E 49 P U E 50 1555 1555 1.60 LINK O3' 5MC F 40 P U F 41 1555 1555 1.60 LINK P 5MC F 49 O3' C F 48 1555 1555 1.62 LINK O3' 5MC F 49 P U F 50 1555 1555 1.62 HETATM 865 P 5MC D 40 134.070 -27.254 62.626 0.89 67.19 P HETATM 866 OP1 5MC D 40 133.153 -28.371 62.965 0.78 67.90 O HETATM 867 OP2 5MC D 40 133.523 -26.059 61.926 0.86 66.89 O HETATM 868 O5' 5MC D 40 134.576 -26.685 64.019 0.57 71.78 O HETATM 869 C5' 5MC D 40 135.001 -27.597 65.038 0.50 75.56 C HETATM 870 C4' 5MC D 40 135.113 -26.829 66.323 1.00 78.14 C HETATM 871 O4' 5MC D 40 136.213 -25.885 66.217 0.96 77.13 O HETATM 872 C3' 5MC D 40 133.920 -25.944 66.646 0.85 82.08 C HETATM 873 O3' 5MC D 40 132.849 -26.607 67.309 1.00 87.33 O HETATM 874 C2' 5MC D 40 134.539 -24.948 67.611 0.98 80.66 C HETATM 875 O2' 5MC D 40 134.658 -25.728 68.782 0.50 84.29 O HETATM 876 C1' 5MC D 40 135.918 -24.736 66.989 0.99 76.08 C HETATM 877 N1 5MC D 40 135.887 -23.430 66.326 1.00 72.95 N HETATM 878 C2 5MC D 40 136.229 -22.302 67.075 0.82 77.22 C HETATM 879 O2 5MC D 40 136.594 -22.456 68.251 0.67 81.20 O HETATM 880 N3 5MC D 40 136.193 -21.081 66.490 1.00 72.77 N HETATM 881 C4 5MC D 40 135.777 -20.961 65.229 1.00 69.13 C HETATM 882 N4 5MC D 40 135.738 -19.737 64.704 0.86 65.13 N HETATM 883 C5 5MC D 40 135.404 -22.094 64.446 0.87 70.47 C HETATM 884 C6 5MC D 40 135.471 -23.298 65.030 1.00 70.08 C HETATM 885 CM5 5MC D 40 135.044 -21.926 63.206 0.92 68.40 C HETATM 1061 P 5MC D 49 108.538 -13.386 48.638 0.86 47.32 P HETATM 1062 OP1 5MC D 49 107.125 -13.843 48.590 0.87 37.05 O HETATM 1063 OP2 5MC D 49 109.559 -13.953 47.704 0.98 55.60 O HETATM 1064 O5' 5MC D 49 108.375 -11.817 48.439 1.00 38.27 O HETATM 1065 C5' 5MC D 49 109.486 -10.909 48.414 0.80 44.46 C HETATM 1066 C4' 5MC D 49 109.104 -9.690 47.601 0.88 45.96 C HETATM 1067 O4' 5MC D 49 109.029 -10.090 46.213 0.96 44.49 O HETATM 1068 C3' 5MC D 49 107.718 -9.136 47.888 0.84 44.85 C HETATM 1069 O3' 5MC D 49 107.570 -8.327 49.038 0.95 42.69 O HETATM 1070 C2' 5MC D 49 107.347 -8.440 46.586 0.99 44.02 C HETATM 1071 O2' 5MC D 49 107.703 -7.075 46.424 0.83 46.70 O HETATM 1072 C1' 5MC D 49 107.982 -9.390 45.576 0.97 40.22 C HETATM 1073 N1 5MC D 49 107.003 -10.289 44.973 0.99 35.00 N HETATM 1074 C2 5MC D 49 106.081 -9.731 44.077 0.97 42.51 C HETATM 1075 O2 5MC D 49 106.126 -8.510 43.858 1.00 42.21 O HETATM 1076 N3 5MC D 49 105.168 -10.532 43.481 1.00 41.38 N HETATM 1077 C4 5MC D 49 105.178 -11.845 43.727 0.77 43.92 C HETATM 1078 N4 5MC D 49 104.272 -12.603 43.107 0.88 49.15 N HETATM 1079 C5 5MC D 49 106.123 -12.443 44.616 0.80 34.89 C HETATM 1080 C6 5MC D 49 107.011 -11.635 45.211 1.00 25.01 C HETATM 1081 CM5 5MC D 49 105.912 -13.879 44.677 0.65 35.29 C HETATM 2518 P 5MC E 40 146.336 21.199 54.520 0.92 73.30 P HETATM 2519 OP1 5MC E 40 147.799 21.165 54.281 0.96 73.26 O HETATM 2520 OP2 5MC E 40 145.577 19.938 54.738 0.99 71.67 O HETATM 2521 O5' 5MC E 40 146.108 21.893 55.932 0.72 77.58 O HETATM 2522 C5' 5MC E 40 147.217 22.103 56.816 0.50 77.59 C HETATM 2523 C4' 5MC E 40 146.745 22.212 58.244 1.00 75.47 C HETATM 2524 O4' 5MC E 40 145.341 22.589 58.283 0.71 74.90 O HETATM 2525 C3' 5MC E 40 146.766 20.921 59.029 1.00 79.44 C HETATM 2526 O3' 5MC E 40 148.065 20.607 59.464 0.78 84.93 O HETATM 2527 C2' 5MC E 40 145.791 21.217 60.157 0.72 77.10 C HETATM 2528 O2' 5MC E 40 146.380 22.115 61.079 0.72 77.15 O HETATM 2529 C1' 5MC E 40 144.707 21.971 59.394 0.93 72.49 C HETATM 2530 N1 5MC E 40 143.591 21.141 58.923 0.90 68.60 N HETATM 2531 C2 5MC E 40 142.655 20.671 59.850 0.86 66.14 C HETATM 2532 O2 5MC E 40 142.816 20.939 61.049 0.65 67.57 O HETATM 2533 N3 5MC E 40 141.601 19.942 59.418 1.00 63.32 N HETATM 2534 C4 5MC E 40 141.467 19.672 58.117 0.95 66.22 C HETATM 2535 N4 5MC E 40 140.418 18.938 57.737 1.00 62.85 N HETATM 2536 C5 5MC E 40 142.414 20.128 57.151 0.71 68.83 C HETATM 2537 C6 5MC E 40 143.450 20.851 57.594 0.93 68.36 C HETATM 2538 CM5 5MC E 40 142.386 19.902 55.938 0.93 69.38 C HETATM 2714 P 5MC E 49 148.165 -9.107 45.218 0.86 64.80 P HETATM 2715 OP1 5MC E 49 149.395 -9.912 44.984 0.89 66.25 O HETATM 2716 OP2 5MC E 49 147.781 -8.112 44.188 0.80 63.63 O HETATM 2717 O5' 5MC E 49 146.847 -9.976 45.466 1.00 45.89 O HETATM 2718 C5' 5MC E 49 145.615 -9.278 45.658 1.00 42.27 C HETATM 2719 C4' 5MC E 49 144.447 -10.032 45.072 0.90 49.10 C HETATM 2720 O4' 5MC E 49 144.501 -10.033 43.618 0.86 52.45 O HETATM 2721 C3' 5MC E 49 144.390 -11.495 45.436 0.99 52.29 C HETATM 2722 O3' 5MC E 49 143.894 -11.705 46.746 0.82 54.64 O HETATM 2723 C2' 5MC E 49 143.537 -12.084 44.316 0.55 50.94 C HETATM 2724 O2' 5MC E 49 142.126 -12.006 44.368 0.91 51.91 O HETATM 2725 C1' 5MC E 49 144.013 -11.268 43.119 1.00 46.90 C HETATM 2726 N1 5MC E 49 145.120 -11.962 42.447 0.89 38.58 N HETATM 2727 C2 5MC E 49 144.870 -13.186 41.813 0.77 37.28 C HETATM 2728 O2 5MC E 49 143.724 -13.663 41.867 0.75 42.43 O HETATM 2729 N3 5MC E 49 145.879 -13.810 41.155 1.00 27.49 N HETATM 2730 C4 5MC E 49 147.099 -13.261 41.136 0.71 30.31 C HETATM 2731 N4 5MC E 49 148.076 -13.898 40.482 0.97 23.49 N HETATM 2732 C5 5MC E 49 147.375 -12.015 41.774 0.92 31.01 C HETATM 2733 C6 5MC E 49 146.365 -11.401 42.399 1.00 30.18 C HETATM 2734 CM5 5MC E 49 148.749 -11.461 41.716 0.79 30.13 C HETATM 4171 P 5MC F 40 95.210 9.222 60.726 0.91 52.54 P HETATM 4172 OP1 5MC F 40 94.221 10.259 60.328 0.66 54.69 O HETATM 4173 OP2 5MC F 40 96.474 9.048 59.965 0.95 50.47 O HETATM 4174 O5' 5MC F 40 95.696 9.233 62.245 0.78 56.99 O HETATM 4175 C5' 5MC F 40 94.729 9.263 63.306 1.00 54.43 C HETATM 4176 C4' 5MC F 40 95.400 8.994 64.631 0.96 59.41 C HETATM 4177 O4' 5MC F 40 95.993 7.667 64.616 1.00 59.36 O HETATM 4178 C3' 5MC F 40 96.566 9.900 64.959 0.72 60.78 C HETATM 4179 O3' 5MC F 40 96.265 11.210 65.392 1.00 58.45 O HETATM 4180 C2' 5MC F 40 97.368 9.063 65.947 0.58 60.08 C HETATM 4181 O2' 5MC F 40 96.937 9.209 67.290 0.95 60.84 O HETATM 4182 C1' 5MC F 40 97.209 7.670 65.344 1.00 58.19 C HETATM 4183 N1 5MC F 40 98.327 7.159 64.528 0.71 59.52 N HETATM 4184 C2 5MC F 40 99.452 6.665 65.191 0.83 52.52 C HETATM 4185 O2 5MC F 40 99.488 6.715 66.424 0.86 41.33 O HETATM 4186 N3 5MC F 40 100.479 6.154 64.472 1.00 57.99 N HETATM 4187 C4 5MC F 40 100.413 6.139 63.141 1.00 62.57 C HETATM 4188 N4 5MC F 40 101.462 5.657 62.474 0.99 65.34 N HETATM 4189 C5 5MC F 40 99.270 6.631 62.436 1.00 65.39 C HETATM 4190 C6 5MC F 40 98.264 7.132 63.162 1.00 63.47 C HETATM 4191 CM5 5MC F 40 98.856 6.673 61.316 0.86 69.73 C HETATM 4367 P 5MC F 49 119.584 23.936 43.154 0.93 58.10 P HETATM 4368 OP1 5MC F 49 119.903 25.316 42.688 0.74 56.85 O HETATM 4369 OP2 5MC F 49 118.539 23.207 42.403 0.90 66.51 O HETATM 4370 O5' 5MC F 49 120.940 23.114 43.027 1.00 50.57 O HETATM 4371 C5' 5MC F 49 120.963 21.726 43.364 0.87 51.56 C HETATM 4372 C4' 5MC F 49 121.981 21.000 42.515 0.98 49.38 C HETATM 4373 O4' 5MC F 49 121.631 21.200 41.123 0.98 48.68 O HETATM 4374 C3' 5MC F 49 123.399 21.514 42.598 0.92 52.92 C HETATM 4375 O3' 5MC F 49 124.201 21.254 43.741 0.80 52.24 O HETATM 4376 C2' 5MC F 49 123.993 21.062 41.272 0.91 54.62 C HETATM 4377 O2' 5MC F 49 124.490 19.742 41.244 1.00 59.03 O HETATM 4378 C1' 5MC F 49 122.805 21.256 40.335 0.79 47.32 C HETATM 4379 N1 5MC F 49 122.751 22.490 39.543 0.94 37.52 N HETATM 4380 C2 5MC F 49 123.733 22.725 38.581 0.78 36.09 C HETATM 4381 O2 5MC F 49 124.663 21.913 38.468 0.84 40.11 O HETATM 4382 N3 5MC F 49 123.656 23.841 37.818 0.84 31.67 N HETATM 4383 C4 5MC F 49 122.632 24.685 37.971 0.69 31.82 C HETATM 4384 N4 5MC F 49 122.580 25.769 37.187 1.00 32.07 N HETATM 4385 C5 5MC F 49 121.600 24.449 38.923 0.74 31.09 C HETATM 4386 C6 5MC F 49 121.691 23.342 39.670 0.98 32.98 C HETATM 4387 CM5 5MC F 49 120.390 25.484 39.082 0.77 30.87 C