load pdb inline background [255,255,255] color cpk select ligand cpk select not ligand wireframe 40 select selected and not bonded cpk 40 select ( protein and carbon and *.CA ) or ( nucleic and *.C5* ) label "%n %r" color label black select not ( HYDROGEN or CARBON or NITROGEN or OXYGEN or PHOSPHORUS or SULPHUR ) label "%e" select carbon color green select phosphorus color magenta select not bonded cpk select all show info exit LINK C1 PEP A 440 C2 2PG A 441 1555 1555 1.57 LINK C1 PEP A 440 O2 2PG A 441 1555 1555 1.36 LINK C1 PEP A 440 O1 2PG A 441 1555 1555 1.21 LINK O1 PEP A 440 C1 2PG A 441 1555 1555 1.22 LINK O2' PEP A 440 C1 2PG A 441 1555 1555 1.27 LINK C2 PEP A 440 C3 2PG A 441 1555 1555 1.54 LINK C2 PEP A 440 C1 2PG A 441 1555 1555 1.52 LINK C2 PEP A 440 O1P 2PG A 441 1555 1555 1.37 LINK C3 PEP A 440 C2 2PG A 441 1555 1555 1.47 LINK C3 PEP A 440 O3 2PG A 441 1555 1555 1.43 LINK O2 PEP A 440 C2 2PG A 441 1555 1555 1.56 LINK O2 PEP A 440 P 2PG A 441 1555 1555 1.84 LINK P PEP A 440 O2P 2PG A 441 1555 1555 1.52 LINK P PEP A 440 O1P 2PG A 441 1555 1555 1.40 LINK P PEP A 440 O3P 2PG A 441 1555 1555 1.68 LINK P PEP A 440 O4P 2PG A 441 1555 1555 1.72 LINK O1P PEP A 440 P 2PG A 441 1555 1555 1.49 LINK O2P PEP A 440 P 2PG A 441 1555 1555 1.37 LINK O3P PEP A 440 P 2PG A 441 1555 1555 1.53 LINK O3P PEP B 440 P 2PG B 441 1555 1555 1.53 LINK O2P PEP B 440 P 2PG B 441 1555 1555 1.37 LINK O1P PEP B 440 P 2PG B 441 1555 1555 1.49 LINK P PEP B 440 O4P 2PG B 441 1555 1555 1.72 LINK P PEP B 440 O3P 2PG B 441 1555 1555 1.68 LINK P PEP B 440 O2P 2PG B 441 1555 1555 1.52 LINK P PEP B 440 O1P 2PG B 441 1555 1555 1.40 LINK O2 PEP B 440 C2 2PG B 441 1555 1555 1.56 LINK O2 PEP B 440 P 2PG B 441 1555 1555 1.84 LINK C3 PEP B 440 O3 2PG B 441 1555 1555 1.43 LINK C3 PEP B 440 C2 2PG B 441 1555 1555 1.47 LINK C2 PEP B 440 C3 2PG B 441 1555 1555 1.54 LINK C2 PEP B 440 C1 2PG B 441 1555 1555 1.52 LINK C2 PEP B 440 O1P 2PG B 441 1555 1555 1.37 LINK O2' PEP B 440 C1 2PG B 441 1555 1555 1.27 LINK O1 PEP B 440 C1 2PG B 441 1555 1555 1.22 LINK C1 PEP B 440 O2 2PG B 441 1555 1555 1.36 LINK C1 PEP B 440 O1 2PG B 441 1555 1555 1.21 LINK C1 PEP B 440 C2 2PG B 441 1555 1555 1.57 HETATM 6589 C1 PEP A 440 16.860 5.526 18.852 0.50 5.16 C HETATM 6590 O1 PEP A 440 16.239 4.691 18.093 0.50 16.08 O HETATM 6591 O2' PEP A 440 16.559 6.693 18.926 0.50 4.57 O HETATM 6592 C2 PEP A 440 18.070 4.941 19.555 0.50 4.97 C HETATM 6593 C3 PEP A 440 18.518 3.662 19.578 0.50 9.76 C HETATM 6594 O2 PEP A 440 18.712 5.823 20.404 0.50 5.60 O HETATM 6595 P PEP A 440 18.448 5.939 21.957 0.50 3.49 P HETATM 6596 O1P PEP A 440 17.063 6.613 22.072 0.50 2.61 O HETATM 6597 O2P PEP A 440 19.586 6.777 22.457 0.50 8.82 O HETATM 6598 O3P PEP A 440 18.342 4.564 22.505 0.50 1.75 O HETATM 6612 C1 PEP B 440 47.020 -7.698 24.673 0.50 11.85 C HETATM 6613 O1 PEP B 440 47.137 -7.876 25.944 0.50 4.78 O HETATM 6614 O2' PEP B 440 47.971 -7.601 23.936 0.50 10.70 O HETATM 6615 C2 PEP B 440 45.590 -7.507 24.205 0.50 6.51 C HETATM 6616 C3 PEP B 440 44.434 -7.601 24.906 0.50 10.09 C HETATM 6617 O2 PEP B 440 45.459 -7.359 22.836 0.50 6.99 O HETATM 6618 P PEP B 440 45.141 -8.531 21.826 0.50 8.47 P HETATM 6619 O1P PEP B 440 46.445 -9.356 21.756 0.50 7.59 O HETATM 6620 O2P PEP B 440 44.787 -7.826 20.552 0.50 2.12 O HETATM 6621 O3P PEP B 440 44.086 -9.381 22.432 0.50 5.62 O