load pdb inline background [255,255,255] color cpk select ligand cpk select not ligand wireframe 40 select selected and not bonded cpk 40 select ( protein and carbon and *.CA ) or ( nucleic and *.C5* ) label "%n %r" color label black select not ( HYDROGEN or CARBON or NITROGEN or OXYGEN or PHOSPHORUS or SULPHUR ) label "%e" select carbon color green select phosphorus color magenta select not bonded cpk select all show info exit LINK O3 NAG A 2 C1 GCU A 3 1555 1555 1.39 LINK O3 NAG A 4 C1 GCU A 5 1555 1555 1.39 HETATM 18 C1 NAG A 2 7.159 2.516 4.939 1.00 0.00 C HETATM 19 C2 NAG A 2 6.216 1.862 5.939 1.00 0.00 C HETATM 20 C3 NAG A 2 6.751 2.018 7.356 1.00 0.00 C HETATM 21 C4 NAG A 2 8.185 1.510 7.439 1.00 0.00 C HETATM 22 C5 NAG A 2 9.037 2.164 6.356 1.00 0.00 C HETATM 23 C6 NAG A 2 10.448 1.616 6.310 1.00 0.00 C HETATM 24 C7 NAG A 2 3.761 1.667 5.965 1.00 0.00 C HETATM 25 C8 NAG A 2 2.460 2.419 5.814 1.00 0.00 C HETATM 26 N2 NAG A 2 4.873 2.470 5.817 1.00 0.00 N HETATM 27 O3 NAG A 2 5.928 1.283 8.262 1.00 0.00 O HETATM 28 O4 NAG A 2 8.750 1.818 8.710 1.00 0.00 O HETATM 29 O5 NAG A 2 8.459 1.933 5.062 1.00 0.00 O HETATM 30 O6 NAG A 2 10.476 0.208 6.541 1.00 0.00 O HETATM 31 O7 NAG A 2 3.820 0.470 6.196 1.00 0.00 O HETATM 32 H1 NAG A 2 7.220 3.595 5.141 1.00 0.00 H HETATM 33 H2 NAG A 2 6.111 0.793 5.703 1.00 0.00 H HETATM 34 H3 NAG A 2 6.720 3.078 7.644 1.00 0.00 H HETATM 35 H4 NAG A 2 8.196 0.418 7.302 1.00 0.00 H HETATM 36 H5 NAG A 2 9.101 3.246 6.544 1.00 0.00 H HETATM 37 H61 NAG A 2 11.056 2.105 7.085 1.00 0.00 H HETATM 38 H62 NAG A 2 10.887 1.813 5.321 1.00 0.00 H HETATM 39 H81 NAG A 2 1.618 1.714 5.891 1.00 0.00 H HETATM 40 H82 NAG A 2 2.378 3.175 6.606 1.00 0.00 H HETATM 41 H83 NAG A 2 2.434 2.914 4.831 1.00 0.00 H HETATM 42 HN2 NAG A 2 4.786 3.399 5.637 1.00 0.00 H HETATM 60 C1 NAG A 4 4.450 2.675 14.439 1.00 0.00 C HETATM 61 C2 NAG A 4 4.355 3.818 15.439 1.00 0.00 C HETATM 62 C3 NAG A 4 4.223 3.277 16.856 1.00 0.00 C HETATM 63 C4 NAG A 4 3.065 2.289 16.938 1.00 0.00 C HETATM 64 C5 NAG A 4 3.206 1.224 15.855 1.00 0.00 C HETATM 65 C6 NAG A 4 2.026 0.277 15.810 1.00 0.00 C HETATM 66 C7 NAG A 4 5.413 6.042 15.465 1.00 0.00 C HETATM 67 C8 NAG A 4 6.715 6.793 15.314 1.00 0.00 C HETATM 68 N2 NAG A 4 5.553 4.677 15.317 1.00 0.00 N HETATM 69 O3 NAG A 4 3.997 4.357 17.762 1.00 0.00 O HETATM 70 O4 NAG A 4 3.049 1.646 18.210 1.00 0.00 O HETATM 71 O5 NAG A 4 3.295 1.840 14.562 1.00 0.00 O HETATM 72 O6 NAG A 4 0.792 0.957 16.041 1.00 0.00 O HETATM 73 O7 NAG A 4 4.347 6.589 15.696 1.00 0.00 O HETATM 74 H1 NAG A 4 5.353 2.082 14.641 1.00 0.00 H HETATM 75 H2 NAG A 4 3.481 4.443 15.203 1.00 0.00 H HETATM 76 H3 NAG A 4 5.156 2.773 17.144 1.00 0.00 H HETATM 77 H4 NAG A 4 2.114 2.825 16.802 1.00 0.00 H HETATM 78 H5 NAG A 4 4.111 0.627 16.044 1.00 0.00 H HETATM 79 H61 NAG A 4 2.145 -0.494 16.585 1.00 0.00 H HETATM 80 H62 NAG A 4 1.976 -0.203 14.821 1.00 0.00 H HETATM 81 H81 NAG A 4 6.526 7.874 15.391 1.00 0.00 H HETATM 82 H82 NAG A 4 7.410 6.486 16.106 1.00 0.00 H HETATM 83 H83 NAG A 4 7.157 6.568 14.331 1.00 0.00 H HETATM 84 HN2 NAG A 4 6.401 4.288 15.137 1.00 0.00 H HETATM 102 C1 NAG A 6 5.942 4.942 23.939 1.00 0.00 C HETATM 103 C2 NAG A 6 6.979 4.452 24.939 1.00 0.00 C HETATM 104 C3 NAG A 6 6.577 4.837 26.356 1.00 0.00 C HETATM 105 C4 NAG A 6 6.300 6.334 26.439 1.00 0.00 C HETATM 106 C5 NAG A 6 5.307 6.744 25.356 1.00 0.00 C HETATM 107 C6 NAG A 6 5.077 8.240 25.310 1.00 0.00 C HETATM 108 C7 NAG A 6 8.376 2.424 24.965 1.00 0.00 C HETATM 109 C8 NAG A 6 8.375 0.921 24.814 1.00 0.00 C HETATM 110 N2 NAG A 6 7.124 2.985 24.817 1.00 0.00 N HETATM 111 O3 NAG A 6 7.625 4.493 27.262 1.00 0.00 O HETATM 112 O4 NAG A 6 5.751 6.669 27.710 1.00 0.00 O HETATM 113 O5 NAG A 6 5.796 6.359 24.062 1.00 0.00 O HETATM 114 O6 NAG A 6 6.282 8.968 25.541 1.00 0.00 O HETATM 115 O7 NAG A 6 9.383 3.073 25.196 1.00 0.00 O HETATM 116 H1 NAG A 6 4.977 4.455 24.141 1.00 0.00 H HETATM 117 H2 NAG A 6 7.957 4.896 24.703 1.00 0.00 H HETATM 118 H3 NAG A 6 5.674 4.281 26.644 1.00 0.00 H HETATM 119 H4 NAG A 6 7.239 6.889 26.302 1.00 0.00 H HETATM 120 H5 NAG A 6 4.338 6.259 25.544 1.00 0.00 H HETATM 121 H61 NAG A 6 4.349 8.522 26.085 1.00 0.00 H HETATM 122 H62 NAG A 6 4.686 8.522 24.321 1.00 0.00 H HETATM 123 H81 NAG A 6 9.406 0.544 24.891 1.00 0.00 H HETATM 124 H82 NAG A 6 7.762 0.472 25.606 1.00 0.00 H HETATM 125 H83 NAG A 6 7.960 0.651 23.831 1.00 0.00 H HETATM 126 HN2 NAG A 6 6.363 2.445 24.637 1.00 0.00 H