ID code: '3MUT' CHIRALITY (03 Nov 1998) Checks the chirality and the naming of substituents of chiral and prochiral centers in nucleic acid structures. The molecular structure is read from a PDB file. Only the first model is evaluated. ---------------------------------------------------------- Center Reference for correct naming ---------------------------------------------------------- C1' alpha/beta nomenclature of anomeric sugars, base in beta position in natural nucleosids. C2' IUPAC. 1983. Eur J Biochem, 131: 9-15. C3' IUPAC. 1983. Eur J Biochem, 131: 9-15. C4' IUPAC. 1983. Eur J Biochem, 131: 9-15. C5' IUPAC. 1983. Eur J Biochem, 131: 9-15. P Brookhaven PDB entry '1BNA', O1P -> major groove, O2P -> minor groove. ---------------------------------------------------------- Author: Peter Slickers (slickers@imb-jena.de) Biocomputing, IMB Jena, Germany --------------------------------------------------------------------------------- Seq No Atom Residue H1' base O4' H1' base C2' --------------------------------------------------------------------------------- 756 C1' GTP R 8 beta 751 757 754 779 C1' G R 9 beta 774 780 777 802 C1' U R 10 beta 797 803 800 822 C1' C R 11 beta 817 823 820 842 C1' A R 12 beta 837 843 840 864 C1' C R 13 beta 859 865 862 884 C1' G R 14 beta 879 885 882 907 C1' C R 15 beta 902 908 905 927 C1' A R 16 beta 922 928 925 949 C1' C R 17 beta 944 950 947 969 C1' A R 18 beta 964 970 967 991 C1' G R 19 beta 986 992 989 1014 C1' A R 20 beta 1009 1015 1012 1036 C1' G R 21 beta 1031 1037 1034 1059 C1' C R 22 beta 1054 1060 1057 1079 C1' A R 23 beta 1074 1080 1077 1101 C1' A R 24 beta 1096 1102 1099 1123 C1' A R 25 beta 1118 1124 1121 1145 C1' C R 26 beta 1140 1146 1143 1165 C1' C R 27 beta 1160 1166 1163 1185 C1' A R 28 beta 1180 1186 1183 1207 C1' U R 29 beta 1202 1208 1205 1227 C1' U R 30 beta 1222 1228 1225 1247 C1' C R 31 beta 1242 1248 1245 1267 C1' G R 32 beta 1262 1268 1265 1290 C1' A R 33 beta 1285 1291 1288 1312 C1' A R 34 beta 1307 1313 1310 1334 C1' A R 35 beta 1329 1335 1332 1356 C1' G R 36 beta 1351 1357 1354 1379 C1' A R 37 beta 1374 1380 1377 1401 C1' G R 38 beta 1396 1402 1399 1424 C1' U R 39 beta 1419 1425 1422 1444 C1' G R 40 beta 1439 1445 1442 1467 C1' G R 41 beta 1462 1468 1465 1490 C1' G R 42 beta 1485 1491 1488 1513 C1' A R 43 beta 1508 1514 1511 1535 C1' C R 44 beta 1530 1536 1533 1555 C1' G R 45 beta 1550 1556 1553 1578 C1' C R 46 beta 1573 1579 1576 1598 C1' A R 47 beta 1593 1599 1596 1620 C1' A R 48 beta 1615 1621 1618 1642 C1' A R 49 beta 1637 1643 1640 1664 C1' G R 50 beta 1659 1665 1662 1687 C1' C R 51 beta 1682 1688 1685 1707 C1' C R 52 beta 1702 1708 1705 1727 C1' U R 53 beta 1722 1728 1725 1747 C1' C R 54 beta 1742 1748 1745 1767 C1' C R 55 beta 1762 1768 1765 1787 C1' G R 56 beta 1782 1788 1785 1810 C1' G R 57 beta 1805 1811 1808 1833 C1' C R 58 beta 1828 1834 1831 1853 C1' C R 59 beta 1848 1854 1851 1873 C1' U R 60 beta 1868 1874 1871 1893 C1' A R 61 beta 1888 1894 1891 1915 C1' A R 62 beta 1910 1916 1913 1937 C1' A R 63 beta 1932 1938 1935 1959 C1' C R 64 beta 1954 1960 1957 1979 C1' C R 65 beta 1974 1980 1977 1999 C1' A R 660 beta 1994 2000 1997 2021 C1' U R 661 beta 2016 2022 2019 2041 C1' U R 662 beta 2036 2042 2039 2061 C1' G R 663 beta 2056 2062 2059 2084 C1' C R 664 beta 2079 2085 2082 2104 C1' A R 665 beta 2099 2105 2102 2126 C1' C R 666 beta 2121 2127 2124 2146 C1' U R 667 beta 2141 2147 2144 2166 C1' C R 668 beta 2161 2167 2164 2186 C1' C R 669 beta 2181 2187 2184 2206 C1' G R 75 beta 2201 2207 2204 2229 C1' G R 76 beta 2224 2230 2227 2252 C1' U R 77 beta 2247 2253 2250 2272 C1' A R 78 beta 2267 2273 2270 2294 C1' G R 79 beta 2289 2295 2292 2317 C1' G R 80 beta 2312 2318 2315 2340 C1' U R 81 beta 2335 2341 2338 2360 C1' A R 82 beta 2355 2361 2358 2382 C1' G R 83 beta 2377 2383 2380 2405 C1' C R 84 beta 2400 2406 2403 2425 C1' G R 85 beta 2420 2426 2423 2448 C1' G R 86 beta 2443 2449 2446 2471 C1' G R 87 beta 2466 2472 2469 2494 C1' G R 88 beta 2489 2495 2492 2517 C1' U R 89 beta 2512 2518 2515 2537 C1' U R 90 beta 2532 2538 2535 2557 C1' A R 91 beta 2552 2558 2555 2579 C1' U R 92 beta 2574 2580 2577 2599 C1' C R 93 beta 2594 2600 2597 2619 C1' G R 94 beta 2614 2620 2617 2642 C1' A R 95 beta 2637 2643 2640 2664 C1' U R 96 beta 2659 2665 2662 2684 C1' G R 97 beta 2679 2685 2682 2707 C1' G R 98 beta 2702 2708 2705 2731 C1' C2E R 1 beta 2726 2732 2729 --------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------- Seq No Atom Residue Deoxyribose Ribose C1' C3' H2'1 H2'2 H2' O2' H2'1 H2'2 H2' O2' --------------------------------------------------------------------------------------------------------------------- 754 C2' GTP R 8 OK 756 752 755 777 C2' G R 9 OK 779 775 778 800 C2' U R 10 OK 802 798 801 820 C2' C R 11 OK 822 818 821 840 C2' A R 12 OK 842 838 841 862 C2' C R 13 OK 864 860 863 882 C2' G R 14 OK 884 880 883 905 C2' C R 15 OK 907 903 906 925 C2' A R 16 OK 927 923 926 947 C2' C R 17 OK 949 945 948 967 C2' A R 18 OK 969 965 968 989 C2' G R 19 OK 991 987 990 1012 C2' A R 20 OK 1014 1010 1013 1034 C2' G R 21 OK 1036 1032 1035 1057 C2' C R 22 OK 1059 1055 1058 1077 C2' A R 23 OK 1079 1075 1078 1099 C2' A R 24 OK 1101 1097 1100 1121 C2' A R 25 OK 1123 1119 1122 1143 C2' C R 26 OK 1145 1141 1144 1163 C2' C R 27 OK 1165 1161 1164 1183 C2' A R 28 OK 1185 1181 1184 1205 C2' U R 29 OK 1207 1203 1206 1225 C2' U R 30 OK 1227 1223 1226 1245 C2' C R 31 OK 1247 1243 1246 1265 C2' G R 32 OK 1267 1263 1266 1288 C2' A R 33 OK 1290 1286 1289 1310 C2' A R 34 OK 1312 1308 1311 1332 C2' A R 35 OK 1334 1330 1333 1354 C2' G R 36 OK 1356 1352 1355 1377 C2' A R 37 OK 1379 1375 1378 1399 C2' G R 38 OK 1401 1397 1400 1422 C2' U R 39 OK 1424 1420 1423 1442 C2' G R 40 OK 1444 1440 1443 1465 C2' G R 41 OK 1467 1463 1466 1488 C2' G R 42 OK 1490 1486 1489 1511 C2' A R 43 OK 1513 1509 1512 1533 C2' C R 44 OK 1535 1531 1534 1553 C2' G R 45 OK 1555 1551 1554 1576 C2' C R 46 OK 1578 1574 1577 1596 C2' A R 47 OK 1598 1594 1597 1618 C2' A R 48 OK 1620 1616 1619 1640 C2' A R 49 OK 1642 1638 1641 1662 C2' G R 50 OK 1664 1660 1663 1685 C2' C R 51 OK 1687 1683 1686 1705 C2' C R 52 OK 1707 1703 1706 1725 C2' U R 53 OK 1727 1723 1726 1745 C2' C R 54 OK 1747 1743 1746 1765 C2' C R 55 OK 1767 1763 1766 1785 C2' G R 56 OK 1787 1783 1786 1808 C2' G R 57 OK 1810 1806 1809 1831 C2' C R 58 OK 1833 1829 1832 1851 C2' C R 59 OK 1853 1849 1852 1871 C2' U R 60 OK 1873 1869 1872 1891 C2' A R 61 OK 1893 1889 1892 1913 C2' A R 62 OK 1915 1911 1914 1935 C2' A R 63 OK 1937 1933 1936 1957 C2' C R 64 OK 1959 1955 1958 1977 C2' C R 65 OK 1979 1975 1978 1997 C2' A R 660 OK 1999 1995 1998 2019 C2' U R 661 OK 2021 2017 2020 2039 C2' U R 662 OK 2041 2037 2040 2059 C2' G R 663 OK 2061 2057 2060 2082 C2' C R 664 OK 2084 2080 2083 2102 C2' A R 665 OK 2104 2100 2103 2124 C2' C R 666 OK 2126 2122 2125 2144 C2' U R 667 OK 2146 2142 2145 2164 C2' C R 668 OK 2166 2162 2165 2184 C2' C R 669 OK 2186 2182 2185 2204 C2' G R 75 OK 2206 2202 2205 2227 C2' G R 76 OK 2229 2225 2228 2250 C2' U R 77 OK 2252 2248 2251 2270 C2' A R 78 OK 2272 2268 2271 2292 C2' G R 79 OK 2294 2290 2293 2315 C2' G R 80 OK 2317 2313 2316 2338 C2' U R 81 OK 2340 2336 2339 2358 C2' A R 82 OK 2360 2356 2359 2380 C2' G R 83 OK 2382 2378 2381 2403 C2' C R 84 OK 2405 2401 2404 2423 C2' G R 85 OK 2425 2421 2424 2446 C2' G R 86 OK 2448 2444 2447 2469 C2' G R 87 OK 2471 2467 2470 2492 C2' G R 88 OK 2494 2490 2493 2515 C2' U R 89 OK 2517 2513 2516 2535 C2' U R 90 OK 2537 2533 2536 2555 C2' A R 91 OK 2557 2553 2556 2577 C2' U R 92 OK 2579 2575 2578 2597 C2' C R 93 OK 2599 2595 2598 2617 C2' G R 94 OK 2619 2615 2618 2640 C2' A R 95 OK 2642 2638 2641 2662 C2' U R 96 OK 2664 2660 2663 2682 C2' G R 97 OK 2684 2680 2683 2705 C2' G R 98 OK 2707 2703 2706 2729 C2' C2E R 1 OK 2731 2727 2730 --------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------- Seq No Atom Residue H3' O3' C4' H3' O3' C2' --------------------------------------------------------------------------------- 752 C3' GTP R 8 OK 750 753 754 775 C3' G R 9 OK 773 776 777 798 C3' U R 10 OK 796 799 800 818 C3' C R 11 OK 816 819 820 838 C3' A R 12 OK 836 839 840 860 C3' C R 13 OK 858 861 862 880 C3' G R 14 OK 878 881 882 903 C3' C R 15 OK 901 904 905 923 C3' A R 16 OK 921 924 925 945 C3' C R 17 OK 943 946 947 965 C3' A R 18 OK 963 966 967 987 C3' G R 19 OK 985 988 989 1010 C3' A R 20 OK 1008 1011 1012 1032 C3' G R 21 OK 1030 1033 1034 1055 C3' C R 22 OK 1053 1056 1057 1075 C3' A R 23 OK 1073 1076 1077 1097 C3' A R 24 OK 1095 1098 1099 1119 C3' A R 25 OK 1117 1120 1121 1141 C3' C R 26 OK 1139 1142 1143 1161 C3' C R 27 OK 1159 1162 1163 1181 C3' A R 28 OK 1179 1182 1183 1203 C3' U R 29 OK 1201 1204 1205 1223 C3' U R 30 OK 1221 1224 1225 1243 C3' C R 31 OK 1241 1244 1245 1263 C3' G R 32 OK 1261 1264 1265 1286 C3' A R 33 OK 1284 1287 1288 1308 C3' A R 34 OK 1306 1309 1310 1330 C3' A R 35 OK 1328 1331 1332 1352 C3' G R 36 OK 1350 1353 1354 1375 C3' A R 37 OK 1373 1376 1377 1397 C3' G R 38 OK 1395 1398 1399 1420 C3' U R 39 OK 1418 1421 1422 1440 C3' G R 40 OK 1438 1441 1442 1463 C3' G R 41 OK 1461 1464 1465 1486 C3' G R 42 OK 1484 1487 1488 1509 C3' A R 43 OK 1507 1510 1511 1531 C3' C R 44 OK 1529 1532 1533 1551 C3' G R 45 OK 1549 1552 1553 1574 C3' C R 46 OK 1572 1575 1576 1594 C3' A R 47 OK 1592 1595 1596 1616 C3' A R 48 OK 1614 1617 1618 1638 C3' A R 49 OK 1636 1639 1640 1660 C3' G R 50 OK 1658 1661 1662 1683 C3' C R 51 OK 1681 1684 1685 1703 C3' C R 52 OK 1701 1704 1705 1723 C3' U R 53 OK 1721 1724 1725 1743 C3' C R 54 OK 1741 1744 1745 1763 C3' C R 55 OK 1761 1764 1765 1783 C3' G R 56 OK 1781 1784 1785 1806 C3' G R 57 OK 1804 1807 1808 1829 C3' C R 58 OK 1827 1830 1831 1849 C3' C R 59 OK 1847 1850 1851 1869 C3' U R 60 OK 1867 1870 1871 1889 C3' A R 61 OK 1887 1890 1891 1911 C3' A R 62 OK 1909 1912 1913 1933 C3' A R 63 OK 1931 1934 1935 1955 C3' C R 64 OK 1953 1956 1957 1975 C3' C R 65 OK 1973 1976 1977 1995 C3' A R 660 OK 1993 1996 1997 2017 C3' U R 661 OK 2015 2018 2019 2037 C3' U R 662 OK 2035 2038 2039 2057 C3' G R 663 OK 2055 2058 2059 2080 C3' C R 664 OK 2078 2081 2082 2100 C3' A R 665 OK 2098 2101 2102 2122 C3' C R 666 OK 2120 2123 2124 2142 C3' U R 667 OK 2140 2143 2144 2162 C3' C R 668 OK 2160 2163 2164 2182 C3' C R 669 OK 2180 2183 2184 2202 C3' G R 75 OK 2200 2203 2204 2225 C3' G R 76 OK 2223 2226 2227 2248 C3' U R 77 OK 2246 2249 2250 2268 C3' A R 78 OK 2266 2269 2270 2290 C3' G R 79 OK 2288 2291 2292 2313 C3' G R 80 OK 2311 2314 2315 2336 C3' U R 81 OK 2334 2337 2338 2356 C3' A R 82 OK 2354 2357 2358 2378 C3' G R 83 OK 2376 2379 2380 2401 C3' C R 84 OK 2399 2402 2403 2421 C3' G R 85 OK 2419 2422 2423 2444 C3' G R 86 OK 2442 2445 2446 2467 C3' G R 87 OK 2465 2468 2469 2490 C3' G R 88 OK 2488 2491 2492 2513 C3' U R 89 OK 2511 2514 2515 2533 C3' U R 90 OK 2531 2534 2535 2553 C3' A R 91 OK 2551 2554 2555 2575 C3' U R 92 OK 2573 2576 2577 2595 C3' C R 93 OK 2593 2596 2597 2615 C3' G R 94 OK 2613 2616 2617 2638 C3' A R 95 OK 2636 2639 2640 2660 C3' U R 96 OK 2658 2661 2662 2680 C3' G R 97 OK 2678 2681 2682 2703 C3' G R 98 OK 2701 2704 2705 2727 C3' C2E R 1 OK 2725 2728 2729 --------------------------------------------------------------------------------- --------------------------------------------------------------------------------- Seq No Atom Residue H4' C5' C3' H4' C5' O4' --------------------------------------------------------------------------------- 750 C4' GTP R 8 OK 752 749 751 773 C4' G R 9 OK 775 772 774 796 C4' U R 10 OK 798 795 797 816 C4' C R 11 OK 818 815 817 836 C4' A R 12 OK 838 835 837 858 C4' C R 13 OK 860 857 859 878 C4' G R 14 OK 880 877 879 901 C4' C R 15 OK 903 900 902 921 C4' A R 16 OK 923 920 922 943 C4' C R 17 OK 945 942 944 963 C4' A R 18 OK 965 962 964 985 C4' G R 19 OK 987 984 986 1008 C4' A R 20 OK 1010 1007 1009 1030 C4' G R 21 OK 1032 1029 1031 1053 C4' C R 22 OK 1055 1052 1054 1073 C4' A R 23 OK 1075 1072 1074 1095 C4' A R 24 OK 1097 1094 1096 1117 C4' A R 25 OK 1119 1116 1118 1139 C4' C R 26 OK 1141 1138 1140 1159 C4' C R 27 OK 1161 1158 1160 1179 C4' A R 28 OK 1181 1178 1180 1201 C4' U R 29 OK 1203 1200 1202 1221 C4' U R 30 OK 1223 1220 1222 1241 C4' C R 31 OK 1243 1240 1242 1261 C4' G R 32 OK 1263 1260 1262 1284 C4' A R 33 OK 1286 1283 1285 1306 C4' A R 34 OK 1308 1305 1307 1328 C4' A R 35 OK 1330 1327 1329 1350 C4' G R 36 OK 1352 1349 1351 1373 C4' A R 37 OK 1375 1372 1374 1395 C4' G R 38 OK 1397 1394 1396 1418 C4' U R 39 OK 1420 1417 1419 1438 C4' G R 40 OK 1440 1437 1439 1461 C4' G R 41 OK 1463 1460 1462 1484 C4' G R 42 OK 1486 1483 1485 1507 C4' A R 43 OK 1509 1506 1508 1529 C4' C R 44 OK 1531 1528 1530 1549 C4' G R 45 OK 1551 1548 1550 1572 C4' C R 46 OK 1574 1571 1573 1592 C4' A R 47 OK 1594 1591 1593 1614 C4' A R 48 OK 1616 1613 1615 1636 C4' A R 49 OK 1638 1635 1637 1658 C4' G R 50 OK 1660 1657 1659 1681 C4' C R 51 OK 1683 1680 1682 1701 C4' C R 52 OK 1703 1700 1702 1721 C4' U R 53 OK 1723 1720 1722 1741 C4' C R 54 OK 1743 1740 1742 1761 C4' C R 55 OK 1763 1760 1762 1781 C4' G R 56 OK 1783 1780 1782 1804 C4' G R 57 OK 1806 1803 1805 1827 C4' C R 58 OK 1829 1826 1828 1847 C4' C R 59 OK 1849 1846 1848 1867 C4' U R 60 OK 1869 1866 1868 1887 C4' A R 61 OK 1889 1886 1888 1909 C4' A R 62 OK 1911 1908 1910 1931 C4' A R 63 OK 1933 1930 1932 1953 C4' C R 64 OK 1955 1952 1954 1973 C4' C R 65 OK 1975 1972 1974 1993 C4' A R 660 OK 1995 1992 1994 2015 C4' U R 661 OK 2017 2014 2016 2035 C4' U R 662 OK 2037 2034 2036 2055 C4' G R 663 OK 2057 2054 2056 2078 C4' C R 664 OK 2080 2077 2079 2098 C4' A R 665 OK 2100 2097 2099 2120 C4' C R 666 OK 2122 2119 2121 2140 C4' U R 667 OK 2142 2139 2141 2160 C4' C R 668 OK 2162 2159 2161 2180 C4' C R 669 OK 2182 2179 2181 2200 C4' G R 75 OK 2202 2199 2201 2223 C4' G R 76 OK 2225 2222 2224 2246 C4' U R 77 OK 2248 2245 2247 2266 C4' A R 78 OK 2268 2265 2267 2288 C4' G R 79 OK 2290 2287 2289 2311 C4' G R 80 OK 2313 2310 2312 2334 C4' U R 81 OK 2336 2333 2335 2354 C4' A R 82 OK 2356 2353 2355 2376 C4' G R 83 OK 2378 2375 2377 2399 C4' C R 84 OK 2401 2398 2400 2419 C4' G R 85 OK 2421 2418 2420 2442 C4' G R 86 OK 2444 2441 2443 2465 C4' G R 87 OK 2467 2464 2466 2488 C4' G R 88 OK 2490 2487 2489 2511 C4' U R 89 OK 2513 2510 2512 2531 C4' U R 90 OK 2533 2530 2532 2551 C4' A R 91 OK 2553 2550 2552 2573 C4' U R 92 OK 2575 2572 2574 2593 C4' C R 93 OK 2595 2592 2594 2613 C4' G R 94 OK 2615 2612 2614 2636 C4' A R 95 OK 2638 2635 2637 2658 C4' U R 96 OK 2660 2657 2659 2678 C4' G R 97 OK 2680 2677 2679 2701 C4' G R 98 OK 2703 2700 2702 2725 C4' C2E R 1 OK 2727 2724 2726 --------------------------------------------------------------------------------- --------------------------------------------------------------------------------- Seq No Atom Residue H5'1 H5'2 O5' H5'1 H5'2 C4' --------------------------------------------------------------------------------- 749 C5' GTP R 8 748 750 772 C5' G R 9 771 773 795 C5' U R 10 794 796 815 C5' C R 11 814 816 835 C5' A R 12 834 836 857 C5' C R 13 856 858 877 C5' G R 14 876 878 900 C5' C R 15 899 901 920 C5' A R 16 919 921 942 C5' C R 17 941 943 962 C5' A R 18 961 963 984 C5' G R 19 983 985 1007 C5' A R 20 1006 1008 1029 C5' G R 21 1028 1030 1052 C5' C R 22 1051 1053 1072 C5' A R 23 1071 1073 1094 C5' A R 24 1093 1095 1116 C5' A R 25 1115 1117 1138 C5' C R 26 1137 1139 1158 C5' C R 27 1157 1159 1178 C5' A R 28 1177 1179 1200 C5' U R 29 1199 1201 1220 C5' U R 30 1219 1221 1240 C5' C R 31 1239 1241 1260 C5' G R 32 1259 1261 1283 C5' A R 33 1282 1284 1305 C5' A R 34 1304 1306 1327 C5' A R 35 1326 1328 1349 C5' G R 36 1348 1350 1372 C5' A R 37 1371 1373 1394 C5' G R 38 1393 1395 1417 C5' U R 39 1416 1418 1437 C5' G R 40 1436 1438 1460 C5' G R 41 1459 1461 1483 C5' G R 42 1482 1484 1506 C5' A R 43 1505 1507 1528 C5' C R 44 1527 1529 1548 C5' G R 45 1547 1549 1571 C5' C R 46 1570 1572 1591 C5' A R 47 1590 1592 1613 C5' A R 48 1612 1614 1635 C5' A R 49 1634 1636 1657 C5' G R 50 1656 1658 1680 C5' C R 51 1679 1681 1700 C5' C R 52 1699 1701 1720 C5' U R 53 1719 1721 1740 C5' C R 54 1739 1741 1760 C5' C R 55 1759 1761 1780 C5' G R 56 1779 1781 1803 C5' G R 57 1802 1804 1826 C5' C R 58 1825 1827 1846 C5' C R 59 1845 1847 1866 C5' U R 60 1865 1867 1886 C5' A R 61 1885 1887 1908 C5' A R 62 1907 1909 1930 C5' A R 63 1929 1931 1952 C5' C R 64 1951 1953 1972 C5' C R 65 1971 1973 1992 C5' A R 660 1991 1993 2014 C5' U R 661 2013 2015 2034 C5' U R 662 2033 2035 2054 C5' G R 663 2053 2055 2077 C5' C R 664 2076 2078 2097 C5' A R 665 2096 2098 2119 C5' C R 666 2118 2120 2139 C5' U R 667 2138 2140 2159 C5' C R 668 2158 2160 2179 C5' C R 669 2178 2180 2199 C5' G R 75 2198 2200 2222 C5' G R 76 2221 2223 2245 C5' U R 77 2244 2246 2265 C5' A R 78 2264 2266 2287 C5' G R 79 2286 2288 2310 C5' G R 80 2309 2311 2333 C5' U R 81 2332 2334 2353 C5' A R 82 2352 2354 2375 C5' G R 83 2374 2376 2398 C5' C R 84 2397 2399 2418 C5' G R 85 2417 2419 2441 C5' G R 86 2440 2442 2464 C5' G R 87 2463 2465 2487 C5' G R 88 2486 2488 2510 C5' U R 89 2509 2511 2530 C5' U R 90 2529 2531 2550 C5' A R 91 2549 2551 2572 C5' U R 92 2571 2573 2592 C5' C R 93 2591 2593 2612 C5' G R 94 2611 2613 2635 C5' A R 95 2634 2636 2657 C5' U R 96 2656 2658 2677 C5' G R 97 2676 2678 2700 C5' G R 98 2699 2701 2724 C5' C2E R 1 2723 2725 --------------------------------------------------------------------------------- --------------------------------------------------------------------------------- Seq No Atom Residue O1P O2P O3' O1P O2P O5' --------------------------------------------------------------------------------- 768 P G R 9 distorted distorted 753 769 770 771 791 P U R 10 distorted distorted 776 792 793 794 811 P C R 11 distorted distorted 799 812 813 814 831 P A R 12 distorted distorted 819 832 833 834 853 P C R 13 distorted distorted 839 854 855 856 873 P G R 14 distorted distorted 861 874 875 876 896 P C R 15 distorted distorted 881 897 898 899 916 P A R 16 distorted distorted 904 917 918 919 938 P C R 17 distorted distorted 924 939 940 941 958 P A R 18 distorted distorted 946 959 960 961 980 P G R 19 distorted distorted 966 981 982 983 1003 P A R 20 distorted distorted 988 1004 1005 1006 1025 P G R 21 distorted distorted 1011 1026 1027 1028 1048 P C R 22 distorted distorted 1033 1049 1050 1051 1068 P A R 23 distorted distorted 1056 1069 1070 1071 1090 P A R 24 distorted distorted 1076 1091 1092 1093 1112 P A R 25 distorted distorted 1098 1113 1114 1115 1134 P C R 26 distorted distorted 1120 1135 1136 1137 1154 P C R 27 distorted distorted 1142 1155 1156 1157 1174 P A R 28 distorted distorted 1162 1175 1176 1177 1196 P U R 29 distorted distorted 1182 1197 1198 1199 1216 P U R 30 distorted distorted 1204 1217 1218 1219 1236 P C R 31 distorted distorted 1224 1237 1238 1239 1256 P G R 32 distorted distorted 1244 1257 1258 1259 1279 P A R 33 distorted distorted 1264 1280 1281 1282 1301 P A R 34 distorted distorted 1287 1302 1303 1304 1323 P A R 35 distorted distorted 1309 1324 1325 1326 1345 P G R 36 distorted distorted 1331 1346 1347 1348 1368 P A R 37 distorted distorted 1353 1369 1370 1371 1390 P G R 38 distorted distorted 1376 1391 1392 1393 1413 P U R 39 distorted distorted 1398 1414 1415 1416 1433 P G R 40 distorted distorted 1421 1434 1435 1436 1456 P G R 41 distorted distorted 1441 1457 1458 1459 1479 P G R 42 distorted distorted 1464 1480 1481 1482 1502 P A R 43 distorted distorted 1487 1503 1504 1505 1524 P C R 44 distorted distorted 1510 1525 1526 1527 1544 P G R 45 distorted distorted 1532 1545 1546 1547 1567 P C R 46 distorted distorted 1552 1568 1569 1570 1587 P A R 47 distorted distorted 1575 1588 1589 1590 1609 P A R 48 distorted distorted 1595 1610 1611 1612 1631 P A R 49 distorted distorted 1617 1632 1633 1634 1653 P G R 50 distorted distorted 1639 1654 1655 1656 1676 P C R 51 distorted distorted 1661 1677 1678 1679 1696 P C R 52 distorted distorted 1684 1697 1698 1699 1716 P U R 53 distorted distorted 1704 1717 1718 1719 1736 P C R 54 distorted distorted 1724 1737 1738 1739 1756 P C R 55 distorted distorted 1744 1757 1758 1759 1776 P G R 56 distorted distorted 1764 1777 1778 1779 1799 P G R 57 distorted distorted 1784 1800 1801 1802 1822 P C R 58 distorted distorted 1807 1823 1824 1825 1842 P C R 59 distorted distorted 1830 1843 1844 1845 1862 P U R 60 distorted distorted 1850 1863 1864 1865 1882 P A R 61 distorted distorted 1870 1883 1884 1885 1904 P A R 62 distorted distorted 1890 1905 1906 1907 1926 P A R 63 distorted distorted 1912 1927 1928 1929 1948 P C R 64 distorted distorted 1934 1949 1950 1951 1968 P C R 65 distorted distorted 1956 1969 1970 1971 1988 P A R 660 distorted distorted 1976 1989 1990 1991 2010 P U R 661 distorted distorted 1996 2011 2012 2013 2030 P U R 662 distorted distorted 2018 2031 2032 2033 2050 P G R 663 distorted distorted 2038 2051 2052 2053 2073 P C R 664 distorted distorted 2058 2074 2075 2076 2093 P A R 665 distorted distorted 2081 2094 2095 2096 2115 P C R 666 distorted distorted 2101 2116 2117 2118 2135 P U R 667 distorted distorted 2123 2136 2137 2138 2155 P C R 668 distorted distorted 2143 2156 2157 2158 2175 P C R 669 distorted distorted 2163 2176 2177 2178 2195 P G R 75 distorted distorted 2183 2196 2197 2198 2218 P G R 76 distorted distorted 2203 2219 2220 2221 2241 P U R 77 distorted distorted 2226 2242 2243 2244 2261 P A R 78 distorted distorted 2249 2262 2263 2264 2283 P G R 79 distorted distorted 2269 2284 2285 2286 2306 P G R 80 distorted distorted 2291 2307 2308 2309 2329 P U R 81 distorted distorted 2314 2330 2331 2332 2349 P A R 82 distorted distorted 2337 2350 2351 2352 2371 P G R 83 distorted distorted 2357 2372 2373 2374 2394 P C R 84 distorted distorted 2379 2395 2396 2397 2414 P G R 85 distorted distorted 2402 2415 2416 2417 2437 P G R 86 distorted distorted 2422 2438 2439 2440 2460 P G R 87 distorted distorted 2445 2461 2462 2463 2483 P G R 88 distorted distorted 2468 2484 2485 2486 2506 P U R 89 distorted distorted 2491 2507 2508 2509 2526 P U R 90 distorted distorted 2514 2527 2528 2529 2546 P A R 91 distorted distorted 2534 2547 2548 2549 2568 P U R 92 distorted distorted 2554 2569 2570 2571 2588 P C R 93 distorted distorted 2576 2589 2590 2591 2608 P G R 94 distorted distorted 2596 2609 2610 2611 2631 P A R 95 distorted distorted 2616 2632 2633 2634 2653 P U R 96 distorted distorted 2639 2654 2655 2656 2673 P G R 97 distorted distorted 2661 2674 2675 2676 2696 P G R 98 distorted distorted 2681 2697 2698 2699 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