ID code: '3MUM' CHIRALITY (03 Nov 1998) Checks the chirality and the naming of substituents of chiral and prochiral centers in nucleic acid structures. The molecular structure is read from a PDB file. Only the first model is evaluated. ---------------------------------------------------------- Center Reference for correct naming ---------------------------------------------------------- C1' alpha/beta nomenclature of anomeric sugars, base in beta position in natural nucleosids. C2' IUPAC. 1983. Eur J Biochem, 131: 9-15. C3' IUPAC. 1983. Eur J Biochem, 131: 9-15. C4' IUPAC. 1983. Eur J Biochem, 131: 9-15. C5' IUPAC. 1983. Eur J Biochem, 131: 9-15. P Brookhaven PDB entry '1BNA', O1P -> major groove, O2P -> minor groove. ---------------------------------------------------------- Author: Peter Slickers (slickers@imb-jena.de) Biocomputing, IMB Jena, Germany --------------------------------------------------------------------------------- Seq No Atom Residue H1' base O4' H1' base C2' --------------------------------------------------------------------------------- 734 C1' GTP R 8 beta 729 735 732 757 C1' G R 9 beta 752 758 755 780 C1' U R 10 beta 775 781 778 800 C1' C R 11 beta 795 801 798 820 C1' A R 12 beta 815 821 818 842 C1' C R 13 beta 837 843 840 862 C1' G R 14 beta 857 863 860 885 C1' C R 15 beta 880 886 883 905 C1' A R 16 beta 900 906 903 927 C1' C R 17 beta 922 928 925 947 C1' A R 18 beta 942 948 945 969 C1' G R 19 beta 964 970 967 992 C1' A R 20 beta 987 993 990 1014 C1' G R 21 beta 1009 1015 1012 1037 C1' C R 22 beta 1032 1038 1035 1057 C1' A R 23 beta 1052 1058 1055 1079 C1' A R 24 beta 1074 1080 1077 1101 C1' A R 25 beta 1096 1102 1099 1123 C1' C R 26 beta 1118 1124 1121 1143 C1' C R 27 beta 1138 1144 1141 1163 C1' A R 28 beta 1158 1164 1161 1185 C1' U R 29 beta 1180 1186 1183 1205 C1' U R 30 beta 1200 1206 1203 1225 C1' C R 31 beta 1220 1226 1223 1245 C1' G R 32 beta 1240 1246 1243 1268 C1' A R 33 beta 1263 1269 1266 1290 C1' A R 34 beta 1285 1291 1288 1312 C1' A R 35 beta 1307 1313 1310 1334 C1' G R 36 beta 1329 1335 1332 1357 C1' A R 37 beta 1352 1358 1355 1379 C1' G R 38 beta 1374 1380 1377 1402 C1' U R 39 beta 1397 1403 1400 1422 C1' G R 40 beta 1417 1423 1420 1445 C1' G R 41 beta 1440 1446 1443 1468 C1' G R 42 beta 1463 1469 1466 1491 C1' A R 43 beta 1486 1492 1489 1513 C1' C R 44 beta 1508 1514 1511 1533 C1' G R 45 beta 1528 1534 1531 1556 C1' C R 46 beta 1551 1557 1554 1576 C1' A R 47 beta 1571 1577 1574 1598 C1' A R 48 beta 1593 1599 1596 1620 C1' A R 49 beta 1615 1621 1618 1642 C1' G R 50 beta 1637 1643 1640 1665 C1' C R 51 beta 1660 1666 1663 1685 C1' C R 52 beta 1680 1686 1683 1705 C1' U R 53 beta 1700 1706 1703 1725 C1' C R 54 beta 1720 1726 1723 1745 C1' C R 55 beta 1740 1746 1743 1765 C1' G R 56 beta 1760 1766 1763 1788 C1' G R 57 beta 1783 1789 1786 1811 C1' C R 58 beta 1806 1812 1809 1831 C1' C R 59 beta 1826 1832 1829 1851 C1' U R 60 beta 1846 1852 1849 1871 C1' A R 61 beta 1866 1872 1869 1893 C1' A R 62 beta 1888 1894 1891 1915 C1' A R 63 beta 1910 1916 1913 1937 C1' C R 64 beta 1932 1938 1935 1957 C1' C R 65 beta 1952 1958 1955 1977 C1' A R 660 beta 1972 1978 1975 1999 C1' U R 661 beta 1994 2000 1997 2019 C1' U R 662 beta 2014 2020 2017 2039 C1' G R 663 beta 2034 2040 2037 2062 C1' C R 664 beta 2057 2063 2060 2082 C1' A R 665 beta 2077 2083 2080 2104 C1' C R 666 beta 2099 2105 2102 2124 C1' U R 667 beta 2119 2125 2122 2144 C1' C R 668 beta 2139 2145 2142 2164 C1' C R 669 beta 2159 2165 2162 2184 C1' G R 75 beta 2179 2185 2182 2207 C1' G R 76 beta 2202 2208 2205 2230 C1' U R 77 beta 2225 2231 2228 2250 C1' A R 78 beta 2245 2251 2248 2272 C1' G R 79 beta 2267 2273 2270 2295 C1' G R 80 beta 2290 2296 2293 2318 C1' U R 81 beta 2313 2319 2316 2338 C1' A R 82 beta 2333 2339 2336 2360 C1' G R 83 beta 2355 2361 2358 2383 C1' C R 84 beta 2378 2384 2381 2403 C1' G R 85 beta 2398 2404 2401 2426 C1' G R 86 beta 2421 2427 2424 2449 C1' G R 87 beta 2444 2450 2447 2472 C1' G R 88 beta 2467 2473 2470 2495 C1' U R 89 beta 2490 2496 2493 2515 C1' U R 90 beta 2510 2516 2513 2535 C1' A R 91 beta 2530 2536 2533 2557 C1' C R 92 beta 2552 2558 2555 2577 C1' C R 93 beta 2572 2578 2575 2597 C1' G R 94 beta 2592 2598 2595 2620 C1' A R 95 beta 2615 2621 2618 2642 C1' U R 96 beta 2637 2643 2640 2662 C1' G R 97 beta 2657 2663 2660 2685 C1' G R 98 beta 2680 2686 2683 2709 C1' C2E R 1 beta 2704 2710 2707 --------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------- Seq No Atom Residue Deoxyribose Ribose C1' C3' H2'1 H2'2 H2' O2' H2'1 H2'2 H2' O2' --------------------------------------------------------------------------------------------------------------------- 732 C2' GTP R 8 OK 734 730 733 755 C2' G R 9 OK 757 753 756 778 C2' U R 10 OK 780 776 779 798 C2' C R 11 OK 800 796 799 818 C2' A R 12 OK 820 816 819 840 C2' C R 13 OK 842 838 841 860 C2' G R 14 OK 862 858 861 883 C2' C R 15 OK 885 881 884 903 C2' A R 16 OK 905 901 904 925 C2' C R 17 OK 927 923 926 945 C2' A R 18 OK 947 943 946 967 C2' G R 19 OK 969 965 968 990 C2' A R 20 OK 992 988 991 1012 C2' G R 21 OK 1014 1010 1013 1035 C2' C R 22 OK 1037 1033 1036 1055 C2' A R 23 OK 1057 1053 1056 1077 C2' A R 24 OK 1079 1075 1078 1099 C2' A R 25 OK 1101 1097 1100 1121 C2' C R 26 OK 1123 1119 1122 1141 C2' C R 27 OK 1143 1139 1142 1161 C2' A R 28 OK 1163 1159 1162 1183 C2' U R 29 OK 1185 1181 1184 1203 C2' U R 30 OK 1205 1201 1204 1223 C2' C R 31 OK 1225 1221 1224 1243 C2' G R 32 OK 1245 1241 1244 1266 C2' A R 33 OK 1268 1264 1267 1288 C2' A R 34 OK 1290 1286 1289 1310 C2' A R 35 OK 1312 1308 1311 1332 C2' G R 36 OK 1334 1330 1333 1355 C2' A R 37 OK 1357 1353 1356 1377 C2' G R 38 OK 1379 1375 1378 1400 C2' U R 39 OK 1402 1398 1401 1420 C2' G R 40 OK 1422 1418 1421 1443 C2' G R 41 OK 1445 1441 1444 1466 C2' G R 42 OK 1468 1464 1467 1489 C2' A R 43 OK 1491 1487 1490 1511 C2' C R 44 OK 1513 1509 1512 1531 C2' G R 45 OK 1533 1529 1532 1554 C2' C R 46 OK 1556 1552 1555 1574 C2' A R 47 OK 1576 1572 1575 1596 C2' A R 48 OK 1598 1594 1597 1618 C2' A R 49 OK 1620 1616 1619 1640 C2' G R 50 OK 1642 1638 1641 1663 C2' C R 51 OK 1665 1661 1664 1683 C2' C R 52 OK 1685 1681 1684 1703 C2' U R 53 OK 1705 1701 1704 1723 C2' C R 54 OK 1725 1721 1724 1743 C2' C R 55 OK 1745 1741 1744 1763 C2' G R 56 OK 1765 1761 1764 1786 C2' G R 57 OK 1788 1784 1787 1809 C2' C R 58 OK 1811 1807 1810 1829 C2' C R 59 OK 1831 1827 1830 1849 C2' U R 60 OK 1851 1847 1850 1869 C2' A R 61 OK 1871 1867 1870 1891 C2' A R 62 OK 1893 1889 1892 1913 C2' A R 63 OK 1915 1911 1914 1935 C2' C R 64 OK 1937 1933 1936 1955 C2' C R 65 OK 1957 1953 1956 1975 C2' A R 660 OK 1977 1973 1976 1997 C2' U R 661 OK 1999 1995 1998 2017 C2' U R 662 OK 2019 2015 2018 2037 C2' G R 663 OK 2039 2035 2038 2060 C2' C R 664 OK 2062 2058 2061 2080 C2' A R 665 OK 2082 2078 2081 2102 C2' C R 666 OK 2104 2100 2103 2122 C2' U R 667 OK 2124 2120 2123 2142 C2' C R 668 OK 2144 2140 2143 2162 C2' C R 669 OK 2164 2160 2163 2182 C2' G R 75 OK 2184 2180 2183 2205 C2' G R 76 OK 2207 2203 2206 2228 C2' U R 77 OK 2230 2226 2229 2248 C2' A R 78 OK 2250 2246 2249 2270 C2' G R 79 OK 2272 2268 2271 2293 C2' G R 80 OK 2295 2291 2294 2316 C2' U R 81 OK 2318 2314 2317 2336 C2' A R 82 OK 2338 2334 2337 2358 C2' G R 83 OK 2360 2356 2359 2381 C2' C R 84 OK 2383 2379 2382 2401 C2' G R 85 OK 2403 2399 2402 2424 C2' G R 86 OK 2426 2422 2425 2447 C2' G R 87 OK 2449 2445 2448 2470 C2' G R 88 OK 2472 2468 2471 2493 C2' U R 89 OK 2495 2491 2494 2513 C2' U R 90 OK 2515 2511 2514 2533 C2' A R 91 OK 2535 2531 2534 2555 C2' C R 92 OK 2557 2553 2556 2575 C2' C R 93 OK 2577 2573 2576 2595 C2' G R 94 OK 2597 2593 2596 2618 C2' A R 95 OK 2620 2616 2619 2640 C2' U R 96 OK 2642 2638 2641 2660 C2' G R 97 OK 2662 2658 2661 2683 C2' G R 98 OK 2685 2681 2684 2707 C2' C2E R 1 OK 2709 2705 2708 --------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------- Seq No Atom Residue H3' O3' C4' H3' O3' C2' --------------------------------------------------------------------------------- 730 C3' GTP R 8 OK 728 731 732 753 C3' G R 9 OK 751 754 755 776 C3' U R 10 OK 774 777 778 796 C3' C R 11 OK 794 797 798 816 C3' A R 12 OK 814 817 818 838 C3' C R 13 OK 836 839 840 858 C3' G R 14 OK 856 859 860 881 C3' C R 15 OK 879 882 883 901 C3' A R 16 OK 899 902 903 923 C3' C R 17 OK 921 924 925 943 C3' A R 18 OK 941 944 945 965 C3' G R 19 OK 963 966 967 988 C3' A R 20 OK 986 989 990 1010 C3' G R 21 OK 1008 1011 1012 1033 C3' C R 22 OK 1031 1034 1035 1053 C3' A R 23 OK 1051 1054 1055 1075 C3' A R 24 OK 1073 1076 1077 1097 C3' A R 25 OK 1095 1098 1099 1119 C3' C R 26 OK 1117 1120 1121 1139 C3' C R 27 OK 1137 1140 1141 1159 C3' A R 28 OK 1157 1160 1161 1181 C3' U R 29 OK 1179 1182 1183 1201 C3' U R 30 OK 1199 1202 1203 1221 C3' C R 31 OK 1219 1222 1223 1241 C3' G R 32 OK 1239 1242 1243 1264 C3' A R 33 OK 1262 1265 1266 1286 C3' A R 34 OK 1284 1287 1288 1308 C3' A R 35 OK 1306 1309 1310 1330 C3' G R 36 OK 1328 1331 1332 1353 C3' A R 37 OK 1351 1354 1355 1375 C3' G R 38 OK 1373 1376 1377 1398 C3' U R 39 OK 1396 1399 1400 1418 C3' G R 40 OK 1416 1419 1420 1441 C3' G R 41 OK 1439 1442 1443 1464 C3' G R 42 OK 1462 1465 1466 1487 C3' A R 43 OK 1485 1488 1489 1509 C3' C R 44 OK 1507 1510 1511 1529 C3' G R 45 OK 1527 1530 1531 1552 C3' C R 46 OK 1550 1553 1554 1572 C3' A R 47 OK 1570 1573 1574 1594 C3' A R 48 OK 1592 1595 1596 1616 C3' A R 49 OK 1614 1617 1618 1638 C3' G R 50 OK 1636 1639 1640 1661 C3' C R 51 OK 1659 1662 1663 1681 C3' C R 52 OK 1679 1682 1683 1701 C3' U R 53 OK 1699 1702 1703 1721 C3' C R 54 OK 1719 1722 1723 1741 C3' C R 55 OK 1739 1742 1743 1761 C3' G R 56 OK 1759 1762 1763 1784 C3' G R 57 OK 1782 1785 1786 1807 C3' C R 58 OK 1805 1808 1809 1827 C3' C R 59 OK 1825 1828 1829 1847 C3' U R 60 OK 1845 1848 1849 1867 C3' A R 61 OK 1865 1868 1869 1889 C3' A R 62 OK 1887 1890 1891 1911 C3' A R 63 OK 1909 1912 1913 1933 C3' C R 64 OK 1931 1934 1935 1953 C3' C R 65 OK 1951 1954 1955 1973 C3' A R 660 OK 1971 1974 1975 1995 C3' U R 661 OK 1993 1996 1997 2015 C3' U R 662 OK 2013 2016 2017 2035 C3' G R 663 OK 2033 2036 2037 2058 C3' C R 664 OK 2056 2059 2060 2078 C3' A R 665 OK 2076 2079 2080 2100 C3' C R 666 OK 2098 2101 2102 2120 C3' U R 667 OK 2118 2121 2122 2140 C3' C R 668 OK 2138 2141 2142 2160 C3' C R 669 OK 2158 2161 2162 2180 C3' G R 75 OK 2178 2181 2182 2203 C3' G R 76 OK 2201 2204 2205 2226 C3' U R 77 OK 2224 2227 2228 2246 C3' A R 78 OK 2244 2247 2248 2268 C3' G R 79 OK 2266 2269 2270 2291 C3' G R 80 OK 2289 2292 2293 2314 C3' U R 81 OK 2312 2315 2316 2334 C3' A R 82 OK 2332 2335 2336 2356 C3' G R 83 OK 2354 2357 2358 2379 C3' C R 84 OK 2377 2380 2381 2399 C3' G R 85 OK 2397 2400 2401 2422 C3' G R 86 OK 2420 2423 2424 2445 C3' G R 87 OK 2443 2446 2447 2468 C3' G R 88 OK 2466 2469 2470 2491 C3' U R 89 OK 2489 2492 2493 2511 C3' U R 90 OK 2509 2512 2513 2531 C3' A R 91 OK 2529 2532 2533 2553 C3' C R 92 OK 2551 2554 2555 2573 C3' C R 93 OK 2571 2574 2575 2593 C3' G R 94 OK 2591 2594 2595 2616 C3' A R 95 OK 2614 2617 2618 2638 C3' U R 96 OK 2636 2639 2640 2658 C3' G R 97 OK 2656 2659 2660 2681 C3' G R 98 OK 2679 2682 2683 2705 C3' C2E R 1 OK 2703 2706 2707 --------------------------------------------------------------------------------- --------------------------------------------------------------------------------- Seq No Atom Residue H4' C5' C3' H4' C5' O4' --------------------------------------------------------------------------------- 728 C4' GTP R 8 OK 730 727 729 751 C4' G R 9 OK 753 750 752 774 C4' U R 10 OK 776 773 775 794 C4' C R 11 OK 796 793 795 814 C4' A R 12 OK 816 813 815 836 C4' C R 13 OK 838 835 837 856 C4' G R 14 OK 858 855 857 879 C4' C R 15 OK 881 878 880 899 C4' A R 16 OK 901 898 900 921 C4' C R 17 OK 923 920 922 941 C4' A R 18 OK 943 940 942 963 C4' G R 19 OK 965 962 964 986 C4' A R 20 OK 988 985 987 1008 C4' G R 21 OK 1010 1007 1009 1031 C4' C R 22 OK 1033 1030 1032 1051 C4' A R 23 OK 1053 1050 1052 1073 C4' A R 24 OK 1075 1072 1074 1095 C4' A R 25 OK 1097 1094 1096 1117 C4' C R 26 OK 1119 1116 1118 1137 C4' C R 27 OK 1139 1136 1138 1157 C4' A R 28 OK 1159 1156 1158 1179 C4' U R 29 OK 1181 1178 1180 1199 C4' U R 30 OK 1201 1198 1200 1219 C4' C R 31 OK 1221 1218 1220 1239 C4' G R 32 OK 1241 1238 1240 1262 C4' A R 33 OK 1264 1261 1263 1284 C4' A R 34 OK 1286 1283 1285 1306 C4' A R 35 OK 1308 1305 1307 1328 C4' G R 36 OK 1330 1327 1329 1351 C4' A R 37 OK 1353 1350 1352 1373 C4' G R 38 OK 1375 1372 1374 1396 C4' U R 39 OK 1398 1395 1397 1416 C4' G R 40 OK 1418 1415 1417 1439 C4' G R 41 OK 1441 1438 1440 1462 C4' G R 42 OK 1464 1461 1463 1485 C4' A R 43 OK 1487 1484 1486 1507 C4' C R 44 OK 1509 1506 1508 1527 C4' G R 45 OK 1529 1526 1528 1550 C4' C R 46 OK 1552 1549 1551 1570 C4' A R 47 OK 1572 1569 1571 1592 C4' A R 48 OK 1594 1591 1593 1614 C4' A R 49 OK 1616 1613 1615 1636 C4' G R 50 OK 1638 1635 1637 1659 C4' C R 51 OK 1661 1658 1660 1679 C4' C R 52 OK 1681 1678 1680 1699 C4' U R 53 OK 1701 1698 1700 1719 C4' C R 54 OK 1721 1718 1720 1739 C4' C R 55 OK 1741 1738 1740 1759 C4' G R 56 OK 1761 1758 1760 1782 C4' G R 57 OK 1784 1781 1783 1805 C4' C R 58 OK 1807 1804 1806 1825 C4' C R 59 OK 1827 1824 1826 1845 C4' U R 60 OK 1847 1844 1846 1865 C4' A R 61 OK 1867 1864 1866 1887 C4' A R 62 OK 1889 1886 1888 1909 C4' A R 63 OK 1911 1908 1910 1931 C4' C R 64 OK 1933 1930 1932 1951 C4' C R 65 OK 1953 1950 1952 1971 C4' A R 660 OK 1973 1970 1972 1993 C4' U R 661 OK 1995 1992 1994 2013 C4' U R 662 OK 2015 2012 2014 2033 C4' G R 663 OK 2035 2032 2034 2056 C4' C R 664 OK 2058 2055 2057 2076 C4' A R 665 OK 2078 2075 2077 2098 C4' C R 666 OK 2100 2097 2099 2118 C4' U R 667 OK 2120 2117 2119 2138 C4' C R 668 OK 2140 2137 2139 2158 C4' C R 669 OK 2160 2157 2159 2178 C4' G R 75 OK 2180 2177 2179 2201 C4' G R 76 OK 2203 2200 2202 2224 C4' U R 77 OK 2226 2223 2225 2244 C4' A R 78 OK 2246 2243 2245 2266 C4' G R 79 OK 2268 2265 2267 2289 C4' G R 80 OK 2291 2288 2290 2312 C4' U R 81 OK 2314 2311 2313 2332 C4' A R 82 OK 2334 2331 2333 2354 C4' G R 83 OK 2356 2353 2355 2377 C4' C R 84 OK 2379 2376 2378 2397 C4' G R 85 OK 2399 2396 2398 2420 C4' G R 86 OK 2422 2419 2421 2443 C4' G R 87 OK 2445 2442 2444 2466 C4' G R 88 OK 2468 2465 2467 2489 C4' U R 89 OK 2491 2488 2490 2509 C4' U R 90 OK 2511 2508 2510 2529 C4' A R 91 OK 2531 2528 2530 2551 C4' C R 92 OK 2553 2550 2552 2571 C4' C R 93 OK 2573 2570 2572 2591 C4' G R 94 OK 2593 2590 2592 2614 C4' A R 95 OK 2616 2613 2615 2636 C4' U R 96 OK 2638 2635 2637 2656 C4' G R 97 OK 2658 2655 2657 2679 C4' G R 98 OK 2681 2678 2680 2703 C4' C2E R 1 OK 2705 2702 2704 --------------------------------------------------------------------------------- --------------------------------------------------------------------------------- Seq No Atom Residue H5'1 H5'2 O5' H5'1 H5'2 C4' --------------------------------------------------------------------------------- 727 C5' GTP R 8 726 728 750 C5' G R 9 749 751 773 C5' U R 10 772 774 793 C5' C R 11 792 794 813 C5' A R 12 812 814 835 C5' C R 13 834 836 855 C5' G R 14 854 856 878 C5' C R 15 877 879 898 C5' A R 16 897 899 920 C5' C R 17 919 921 940 C5' A R 18 939 941 962 C5' G R 19 961 963 985 C5' A R 20 984 986 1007 C5' G R 21 1006 1008 1030 C5' C R 22 1029 1031 1050 C5' A R 23 1049 1051 1072 C5' A R 24 1071 1073 1094 C5' A R 25 1093 1095 1116 C5' C R 26 1115 1117 1136 C5' C R 27 1135 1137 1156 C5' A R 28 1155 1157 1178 C5' U R 29 1177 1179 1198 C5' U R 30 1197 1199 1218 C5' C R 31 1217 1219 1238 C5' G R 32 1237 1239 1261 C5' A R 33 1260 1262 1283 C5' A R 34 1282 1284 1305 C5' A R 35 1304 1306 1327 C5' G R 36 1326 1328 1350 C5' A R 37 1349 1351 1372 C5' G R 38 1371 1373 1395 C5' U R 39 1394 1396 1415 C5' G R 40 1414 1416 1438 C5' G R 41 1437 1439 1461 C5' G R 42 1460 1462 1484 C5' A R 43 1483 1485 1506 C5' C R 44 1505 1507 1526 C5' G R 45 1525 1527 1549 C5' C R 46 1548 1550 1569 C5' A R 47 1568 1570 1591 C5' A R 48 1590 1592 1613 C5' A R 49 1612 1614 1635 C5' G R 50 1634 1636 1658 C5' C R 51 1657 1659 1678 C5' C R 52 1677 1679 1698 C5' U R 53 1697 1699 1718 C5' C R 54 1717 1719 1738 C5' C R 55 1737 1739 1758 C5' G R 56 1757 1759 1781 C5' G R 57 1780 1782 1804 C5' C R 58 1803 1805 1824 C5' C R 59 1823 1825 1844 C5' U R 60 1843 1845 1864 C5' A R 61 1863 1865 1886 C5' A R 62 1885 1887 1908 C5' A R 63 1907 1909 1930 C5' C R 64 1929 1931 1950 C5' C R 65 1949 1951 1970 C5' A R 660 1969 1971 1992 C5' U R 661 1991 1993 2012 C5' U R 662 2011 2013 2032 C5' G R 663 2031 2033 2055 C5' C R 664 2054 2056 2075 C5' A R 665 2074 2076 2097 C5' C R 666 2096 2098 2117 C5' U R 667 2116 2118 2137 C5' C R 668 2136 2138 2157 C5' C R 669 2156 2158 2177 C5' G R 75 2176 2178 2200 C5' G R 76 2199 2201 2223 C5' U R 77 2222 2224 2243 C5' A R 78 2242 2244 2265 C5' G R 79 2264 2266 2288 C5' G R 80 2287 2289 2311 C5' U R 81 2310 2312 2331 C5' A R 82 2330 2332 2353 C5' G R 83 2352 2354 2376 C5' C R 84 2375 2377 2396 C5' G R 85 2395 2397 2419 C5' G R 86 2418 2420 2442 C5' G R 87 2441 2443 2465 C5' G R 88 2464 2466 2488 C5' U R 89 2487 2489 2508 C5' U R 90 2507 2509 2528 C5' A R 91 2527 2529 2550 C5' C R 92 2549 2551 2570 C5' C R 93 2569 2571 2590 C5' G R 94 2589 2591 2613 C5' A R 95 2612 2614 2635 C5' U R 96 2634 2636 2655 C5' G R 97 2654 2656 2678 C5' G R 98 2677 2679 2702 C5' C2E R 1 2701 2703 --------------------------------------------------------------------------------- --------------------------------------------------------------------------------- Seq No Atom Residue O1P O2P O3' O1P O2P O5' --------------------------------------------------------------------------------- 746 P G R 9 distorted distorted 731 747 748 749 769 P U R 10 distorted distorted 754 770 771 772 789 P C R 11 distorted distorted 777 790 791 792 809 P A R 12 distorted distorted 797 810 811 812 831 P C R 13 distorted distorted 817 832 833 834 851 P G R 14 distorted distorted 839 852 853 854 874 P C R 15 distorted distorted 859 875 876 877 894 P A R 16 distorted distorted 882 895 896 897 916 P C R 17 distorted distorted 902 917 918 919 936 P A R 18 distorted distorted 924 937 938 939 958 P G R 19 distorted distorted 944 959 960 961 981 P A R 20 distorted distorted 966 982 983 984 1003 P G R 21 distorted distorted 989 1004 1005 1006 1026 P C R 22 distorted distorted 1011 1027 1028 1029 1046 P A R 23 distorted distorted 1034 1047 1048 1049 1068 P A R 24 distorted distorted 1054 1069 1070 1071 1090 P A R 25 distorted distorted 1076 1091 1092 1093 1112 P C R 26 distorted distorted 1098 1113 1114 1115 1132 P C R 27 distorted distorted 1120 1133 1134 1135 1152 P A R 28 distorted distorted 1140 1153 1154 1155 1174 P U R 29 distorted distorted 1160 1175 1176 1177 1194 P U R 30 distorted distorted 1182 1195 1196 1197 1214 P C R 31 distorted distorted 1202 1215 1216 1217 1234 P G R 32 distorted distorted 1222 1235 1236 1237 1257 P A R 33 distorted distorted 1242 1258 1259 1260 1279 P A R 34 distorted distorted 1265 1280 1281 1282 1301 P A R 35 distorted distorted 1287 1302 1303 1304 1323 P G R 36 distorted distorted 1309 1324 1325 1326 1346 P A R 37 distorted distorted 1331 1347 1348 1349 1368 P G R 38 distorted distorted 1354 1369 1370 1371 1391 P U R 39 distorted distorted 1376 1392 1393 1394 1411 P G R 40 distorted distorted 1399 1412 1413 1414 1434 P G R 41 distorted distorted 1419 1435 1436 1437 1457 P G R 42 distorted distorted 1442 1458 1459 1460 1480 P A R 43 distorted distorted 1465 1481 1482 1483 1502 P C R 44 distorted distorted 1488 1503 1504 1505 1522 P G R 45 distorted distorted 1510 1523 1524 1525 1545 P C R 46 distorted distorted 1530 1546 1547 1548 1565 P A R 47 distorted distorted 1553 1566 1567 1568 1587 P A R 48 distorted distorted 1573 1588 1589 1590 1609 P A R 49 distorted distorted 1595 1610 1611 1612 1631 P G R 50 distorted distorted 1617 1632 1633 1634 1654 P C R 51 distorted distorted 1639 1655 1656 1657 1674 P C R 52 distorted distorted 1662 1675 1676 1677 1694 P U R 53 distorted distorted 1682 1695 1696 1697 1714 P C R 54 distorted distorted 1702 1715 1716 1717 1734 P C R 55 distorted distorted 1722 1735 1736 1737 1754 P G R 56 distorted distorted 1742 1755 1756 1757 1777 P G R 57 distorted distorted 1762 1778 1779 1780 1800 P C R 58 distorted distorted 1785 1801 1802 1803 1820 P C R 59 distorted distorted 1808 1821 1822 1823 1840 P U R 60 distorted distorted 1828 1841 1842 1843 1860 P A R 61 distorted distorted 1848 1861 1862 1863 1882 P A R 62 distorted distorted 1868 1883 1884 1885 1904 P A R 63 distorted distorted 1890 1905 1906 1907 1926 P C R 64 distorted distorted 1912 1927 1928 1929 1946 P C R 65 distorted distorted 1934 1947 1948 1949 1966 P A R 660 distorted distorted 1954 1967 1968 1969 1988 P U R 661 distorted distorted 1974 1989 1990 1991 2008 P U R 662 distorted distorted 1996 2009 2010 2011 2028 P G R 663 distorted distorted 2016 2029 2030 2031 2051 P C R 664 distorted distorted 2036 2052 2053 2054 2071 P A R 665 distorted distorted 2059 2072 2073 2074 2093 P C R 666 distorted distorted 2079 2094 2095 2096 2113 P U R 667 distorted distorted 2101 2114 2115 2116 2133 P C R 668 distorted distorted 2121 2134 2135 2136 2153 P C R 669 distorted distorted 2141 2154 2155 2156 2173 P G R 75 distorted distorted 2161 2174 2175 2176 2196 P G R 76 distorted distorted 2181 2197 2198 2199 2219 P U R 77 distorted distorted 2204 2220 2221 2222 2239 P A R 78 distorted distorted 2227 2240 2241 2242 2261 P G R 79 distorted distorted 2247 2262 2263 2264 2284 P G R 80 distorted distorted 2269 2285 2286 2287 2307 P U R 81 distorted distorted 2292 2308 2309 2310 2327 P A R 82 distorted distorted 2315 2328 2329 2330 2349 P G R 83 distorted distorted 2335 2350 2351 2352 2372 P C R 84 distorted distorted 2357 2373 2374 2375 2392 P G R 85 distorted distorted 2380 2393 2394 2395 2415 P G R 86 distorted distorted 2400 2416 2417 2418 2438 P G R 87 distorted distorted 2423 2439 2440 2441 2461 P G R 88 distorted distorted 2446 2462 2463 2464 2484 P U R 89 distorted distorted 2469 2485 2486 2487 2504 P U R 90 distorted distorted 2492 2505 2506 2507 2524 P A R 91 distorted distorted 2512 2525 2526 2527 2546 P C R 92 distorted distorted 2532 2547 2548 2549 2566 P C R 93 distorted distorted 2554 2567 2568 2569 2586 P G R 94 distorted distorted 2574 2587 2588 2589 2609 P A R 95 distorted distorted 2594 2610 2611 2612 2631 P U R 96 distorted distorted 2617 2632 2633 2634 2651 P G R 97 distorted distorted 2639 2652 2653 2654 2674 P G R 98 distorted distorted 2659 2675 2676 2677 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