ID code: '1L4Q' CHIRALITY (03 Nov 1998) Checks the chirality and the naming of substituents of chiral and prochiral centers in nucleic acid structures. The molecular structure is read from a PDB file. Only the first model is evaluated. ---------------------------------------------------------- Center Reference for correct naming ---------------------------------------------------------- C1' alpha/beta nomenclature of anomeric sugars, base in beta position in natural nucleosids. C2' IUPAC. 1983. Eur J Biochem, 131: 9-15. C3' IUPAC. 1983. Eur J Biochem, 131: 9-15. C4' IUPAC. 1983. Eur J Biochem, 131: 9-15. C5' IUPAC. 1983. Eur J Biochem, 131: 9-15. P Brookhaven PDB entry '1BNA', O1P -> major groove, O2P -> minor groove. ---------------------------------------------------------- Author: Peter Slickers (slickers@imb-jena.de) Biocomputing, IMB Jena, Germany --------------------------------------------------------------------------------- Seq No Atom Residue H1' base O4' H1' base C2' --------------------------------------------------------------------------------- 12 C1' U A 1 alpha beta 7 27 13 10 42 C1' C A 2 alpha beta 37 57 43 40 73 C1' A A 3 alpha beta 68 90 74 71 106 C1' A A 4 alpha beta 101 123 107 104 139 C1' U A 5 alpha beta 134 154 140 137 169 C1' G A 6 alpha beta 164 187 170 167 203 C1' G A 7 alpha beta 198 221 204 201 237 C1' U A 8 alpha beta 232 252 238 235 267 C1' A A 9 alpha beta 262 284 268 265 300 C1' C A 10 alpha beta 295 315 301 298 331 C1' G A 11 alpha beta 326 349 332 329 365 C1' G A 12 alpha beta 360 383 366 363 399 C1' U A 13 alpha beta 394 414 400 397 429 C1' A A 14 alpha beta 424 446 430 427 462 C1' C A 15 alpha beta 457 477 463 460 493 C1' U A 16 alpha beta 488 508 494 491 523 C1' U A 17 alpha beta 518 538 524 521 553 C1' C A 18 alpha beta 548 568 554 551 584 C1' C A 19 alpha beta 579 599 585 582 615 C1' A A 20 alpha beta 610 632 616 613 648 C1' U A 21 alpha beta 643 663 649 646 678 C1' U A 22 alpha beta 673 693 679 676 708 C1' G A 23 alpha beta 703 726 709 706 742 C1' U A 24 alpha beta 737 757 743 740 772 C1' C A 25 alpha beta 767 787 773 770 803 C1' A A 26 alpha beta 798 820 804 801 836 C1' U A 27 alpha beta 831 851 837 834 866 C1' G A 28 alpha beta 861 884 867 864 900 C1' U A 29 alpha beta 895 915 901 898 930 C1' G A 30 alpha beta 925 948 931 928 964 C1' U A 31 alpha beta 959 979 965 962 994 C1' A A 32 alpha beta 989 1011 995 992 1027 C1' U A 33 alpha beta 1022 1042 1028 1025 1057 C1' G A 34 alpha beta 1052 1075 1058 1055 1091 C1' U A 35 alpha beta 1086 1106 1092 1089 1121 C1' U A 36 alpha beta 1116 1136 1122 1119 1151 C1' G A 37 alpha beta 1146 1169 1152 1149 1185 C1' G A 38 alpha beta 1180 1203 1186 1183 1219 C1' G A 39 alpha beta 1214 1237 1220 1217 1253 C1' G A 40 alpha beta 1248 1271 1254 1251 1287 C1' A A 41 alpha beta 1282 1304 1288 1285 1320 C1' U A 42 alpha beta 1315 1335 1321 1318 1350 C1' U A 43 alpha beta 1345 1365 1351 1348 1380 C1' A A 44 alpha beta 1375 1397 1381 1378 1413 C1' A A 45 alpha beta 1408 1430 1414 1411 1446 C1' A A 46 alpha beta 1441 1463 1447 1444 1479 C1' C A 47 alpha beta 1474 1494 1480 1477 1510 C1' C A 48 alpha beta 1505 1525 1511 1508 1541 C1' C A 49 alpha beta 1536 1556 1542 1539 1572 C1' U A 50 alpha beta 1567 1587 1573 1570 1602 C1' G A 51 alpha beta 1597 1620 1603 1600 1636 C1' A A 52 alpha beta 1631 1653 1637 1634 1669 C1' U A 53 alpha beta 1664 1684 1670 1667 1699 C1' U A 54 alpha beta 1694 1714 1700 1697 1729 C1' G A 55 alpha beta 1724 1747 1730 1727 1763 C1' A A 56 alpha beta 1758 1780 1764 1761 1796 C1' G A 57 alpha beta 1791 1814 1797 1794 1830 C1' U A 58 alpha beta 1825 1845 1831 1828 1860 C1' U A 59 alpha beta 1855 1875 1861 1858 1890 C1' C A 60 alpha beta 1885 1905 1891 1888 1921 C1' A A 61 alpha beta 1916 1938 1922 1919 1954 C1' G A 62 alpha beta 1949 1972 1955 1952 1988 C1' C A 63 alpha beta 1983 2003 1989 1986 2019 C1' C A 64 alpha beta 2014 2034 2020 2017 2050 C1' C A 65 alpha beta 2045 2065 2051 2048 2081 C1' A A 66 alpha beta 2076 2098 2082 2079 2114 C1' C A 67 alpha beta 2109 2129 2115 2112 2145 C1' A A 68 alpha beta 2140 2162 2146 2143 2178 C1' U A 69 alpha beta 2173 2193 2179 2176 2208 C1' A A 70 alpha beta 2203 2225 2209 2206 2241 C1' C A 71 alpha beta 2236 2256 2242 2239 2272 C1' U A 72 alpha beta 2267 2287 2273 2270 2302 C1' U A 73 alpha beta 2297 2317 2303 2300 2332 C1' U A 74 alpha beta 2327 2347 2333 2330 2362 C1' G A 75 alpha beta 2357 2380 2363 2360 2396 C1' U A 76 alpha beta 2391 2411 2397 2394 2426 C1' U A 77 alpha beta 2421 2441 2427 2424 2456 C1' G A 78 alpha beta 2451 2474 2457 2454 2490 C1' A A 79 alpha beta 2485 2507 2491 2488 2523 C1' U A 80 alpha beta 2518 2538 2524 2521 2553 C1' U A 81 alpha beta 2548 2568 2554 2551 2583 C1' G A 82 alpha beta 2578 2601 2584 2581 2617 C1' G A 83 alpha beta 2612 2635 2618 2615 2651 C1' U A 84 alpha beta 2646 2666 2652 2649 2681 C1' U A 85 alpha beta 2676 2696 2682 2679 2711 C1' G A 86 alpha beta 2706 2729 2712 2709 2745 C1' U A 87 alpha beta 2740 2760 2746 2743 2775 C1' C A 88 alpha beta 2770 2790 2776 2773 2806 C1' A A 89 alpha beta 2801 2823 2807 2804 2839 C1' A A 90 alpha beta 2834 2856 2840 2837 2872 C1' U A 91 alpha beta 2867 2887 2873 2870 2902 C1' C A 92 alpha beta 2897 2917 2903 2900 2933 C1' A A 93 alpha beta 2928 2950 2934 2931 2966 C1' U A 94 alpha beta 2961 2981 2967 2964 2996 C1' G A 95 alpha beta 2991 3014 2997 2994 3030 C1' G A 96 alpha beta 3025 3048 3031 3028 3064 C1' C A 97 alpha beta 3059 3079 3065 3062 3095 C1' A A 98 alpha beta 3090 3112 3096 3093 3128 C1' A A 99 alpha beta 3123 3145 3129 3126 3161 C1' A A 100 alpha beta 3156 3178 3162 3159 3194 C1' A A 101 alpha beta 3189 3211 3195 3192 3227 C1' G A 102 alpha beta 3222 3245 3228 3225 3261 C1' U A 103 alpha beta 3256 3276 3262 3259 3291 C1' G A 104 alpha beta 3286 3309 3292 3289 3325 C1' C A 105 alpha beta 3320 3340 3326 3323 3356 C1' A A 106 alpha beta 3351 3373 3357 3354 3389 C1' C A 107 alpha beta 3384 3404 3390 3387 3420 C1' G A 108 alpha beta 3415 3438 3421 3418 3454 C1' C A 109 alpha beta 3449 3469 3455 3452 3485 C1' U A 110 alpha beta 3480 3500 3486 3483 3515 C1' A A 111 alpha beta 3510 3532 3516 3513 3548 C1' C A 112 alpha beta 3543 3563 3549 3546 3579 C1' U A 113 alpha beta 3574 3594 3580 3577 3609 C1' U A 114 alpha beta 3604 3624 3610 3607 3639 C1' U A 115 alpha beta 3634 3654 3640 3637 3669 C1' G A 116 alpha beta 3664 3687 3670 3667 3703 C1' A A 117 alpha beta 3698 3720 3704 3701 3737 C1' U B 201 alpha beta 3732 3752 3738 3735 3767 C1' C B 202 alpha beta 3762 3782 3768 3765 3798 C1' A B 203 alpha beta 3793 3815 3799 3796 3831 C1' A B 204 alpha beta 3826 3848 3832 3829 3864 C1' U B 205 alpha beta 3859 3879 3865 3862 3894 C1' G B 206 alpha beta 3889 3912 3895 3892 3928 C1' G B 207 alpha beta 3923 3946 3929 3926 3962 C1' U B 208 alpha beta 3957 3977 3963 3960 3992 C1' A B 209 alpha beta 3987 4009 3993 3990 4025 C1' C B 210 alpha beta 4020 4040 4026 4023 4056 C1' G B 211 alpha beta 4051 4074 4057 4054 4090 C1' G B 212 alpha beta 4085 4108 4091 4088 4124 C1' U B 213 alpha beta 4119 4139 4125 4122 4154 C1' A B 214 alpha beta 4149 4171 4155 4152 4187 C1' C B 215 alpha beta 4182 4202 4188 4185 4218 C1' U B 216 alpha beta 4213 4233 4219 4216 4248 C1' U B 217 alpha beta 4243 4263 4249 4246 4278 C1' C B 218 alpha beta 4273 4293 4279 4276 4309 C1' C B 219 alpha beta 4304 4324 4310 4307 4340 C1' A B 220 alpha beta 4335 4357 4341 4338 4373 C1' U B 221 alpha beta 4368 4388 4374 4371 4403 C1' U B 222 alpha beta 4398 4418 4404 4401 4433 C1' G B 223 alpha beta 4428 4451 4434 4431 4467 C1' U B 224 alpha beta 4462 4482 4468 4465 4497 C1' C B 225 alpha beta 4492 4512 4498 4495 4528 C1' A B 226 alpha beta 4523 4545 4529 4526 4561 C1' U B 227 alpha beta 4556 4576 4562 4559 4591 C1' G B 228 alpha beta 4586 4609 4592 4589 4625 C1' U B 229 alpha beta 4620 4640 4626 4623 4655 C1' G B 230 alpha beta 4650 4673 4656 4653 4689 C1' U B 231 alpha beta 4684 4704 4690 4687 4719 C1' A B 232 alpha beta 4714 4736 4720 4717 4752 C1' U B 233 alpha beta 4747 4767 4753 4750 4782 C1' G B 234 alpha beta 4777 4800 4783 4780 4816 C1' U B 235 alpha beta 4811 4831 4817 4814 4846 C1' U B 236 alpha beta 4841 4861 4847 4844 4876 C1' G B 237 alpha beta 4871 4894 4877 4874 4910 C1' G B 238 alpha beta 4905 4928 4911 4908 4944 C1' G B 239 alpha beta 4939 4962 4945 4942 4978 C1' G B 240 alpha beta 4973 4996 4979 4976 5012 C1' A B 241 alpha beta 5007 5029 5013 5010 5045 C1' U B 242 alpha beta 5040 5060 5046 5043 5075 C1' U B 243 alpha beta 5070 5090 5076 5073 5105 C1' A B 244 alpha beta 5100 5122 5106 5103 5138 C1' A B 245 alpha beta 5133 5155 5139 5136 5171 C1' A B 246 alpha beta 5166 5188 5172 5169 5204 C1' C B 247 alpha beta 5199 5219 5205 5202 5235 C1' C B 248 alpha beta 5230 5250 5236 5233 5266 C1' C B 249 alpha beta 5261 5281 5267 5264 5297 C1' U B 250 alpha beta 5292 5312 5298 5295 5327 C1' G B 251 alpha beta 5322 5345 5328 5325 5361 C1' A B 252 alpha beta 5356 5378 5362 5359 5394 C1' U B 253 alpha beta 5389 5409 5395 5392 5424 C1' U B 254 alpha beta 5419 5439 5425 5422 5454 C1' G B 255 alpha beta 5449 5472 5455 5452 5488 C1' A B 256 alpha beta 5483 5505 5489 5486 5521 C1' G B 257 alpha beta 5516 5539 5522 5519 5555 C1' U B 258 alpha beta 5550 5570 5556 5553 5585 C1' U B 259 alpha beta 5580 5600 5586 5583 5615 C1' C B 260 alpha beta 5610 5630 5616 5613 5646 C1' A B 261 alpha beta 5641 5663 5647 5644 5679 C1' G B 262 alpha beta 5674 5697 5680 5677 5713 C1' C B 263 alpha beta 5708 5728 5714 5711 5744 C1' C B 264 alpha beta 5739 5759 5745 5742 5775 C1' C B 265 alpha beta 5770 5790 5776 5773 5806 C1' A B 266 alpha beta 5801 5823 5807 5804 5839 C1' C B 267 alpha beta 5834 5854 5840 5837 5870 C1' A B 268 alpha beta 5865 5887 5871 5868 5903 C1' U B 269 alpha beta 5898 5918 5904 5901 5933 C1' A B 270 alpha beta 5928 5950 5934 5931 5966 C1' C B 271 alpha beta 5961 5981 5967 5964 5997 C1' U B 272 alpha beta 5992 6012 5998 5995 6027 C1' U B 273 alpha beta 6022 6042 6028 6025 6057 C1' U B 274 alpha beta 6052 6072 6058 6055 6087 C1' G B 275 alpha beta 6082 6105 6088 6085 6121 C1' U B 276 alpha beta 6116 6136 6122 6119 6151 C1' U B 277 alpha beta 6146 6166 6152 6149 6181 C1' G B 278 alpha beta 6176 6199 6182 6179 6215 C1' A B 279 alpha beta 6210 6232 6216 6213 6248 C1' U B 280 alpha beta 6243 6263 6249 6246 6278 C1' U B 281 alpha beta 6273 6293 6279 6276 6308 C1' G B 282 alpha beta 6303 6326 6309 6306 6342 C1' G B 283 alpha beta 6337 6360 6343 6340 6376 C1' U B 284 alpha beta 6371 6391 6377 6374 6406 C1' U B 285 alpha beta 6401 6421 6407 6404 6436 C1' G B 286 alpha beta 6431 6454 6437 6434 6470 C1' U B 287 alpha beta 6465 6485 6471 6468 6500 C1' C B 288 alpha beta 6495 6515 6501 6498 6531 C1' A B 289 alpha beta 6526 6548 6532 6529 6564 C1' A B 290 alpha beta 6559 6581 6565 6562 6597 C1' U B 291 alpha beta 6592 6612 6598 6595 6627 C1' C B 292 alpha beta 6622 6642 6628 6625 6658 C1' A B 293 alpha beta 6653 6675 6659 6656 6691 C1' U B 294 alpha beta 6686 6706 6692 6689 6721 C1' G B 295 alpha beta 6716 6739 6722 6719 6755 C1' G B 296 alpha beta 6750 6773 6756 6753 6789 C1' C B 297 alpha beta 6784 6804 6790 6787 6820 C1' A B 298 alpha beta 6815 6837 6821 6818 6853 C1' A B 299 alpha beta 6848 6870 6854 6851 6886 C1' A B 300 alpha beta 6881 6903 6887 6884 6919 C1' A B 301 alpha beta 6914 6936 6920 6917 6952 C1' G B 302 alpha beta 6947 6970 6953 6950 6986 C1' U B 303 alpha beta 6981 7001 6987 6984 7016 C1' G B 304 alpha beta 7011 7034 7017 7014 7050 C1' C B 305 alpha beta 7045 7065 7051 7048 7081 C1' A B 306 alpha beta 7076 7098 7082 7079 7114 C1' C B 307 alpha beta 7109 7129 7115 7112 7145 C1' G B 308 alpha beta 7140 7163 7146 7143 7179 C1' C B 309 alpha beta 7174 7194 7180 7177 7210 C1' U B 310 alpha beta 7205 7225 7211 7208 7240 C1' A B 311 alpha beta 7235 7257 7241 7238 7273 C1' C B 312 alpha beta 7268 7288 7274 7271 7304 C1' U B 313 alpha beta 7299 7319 7305 7302 7334 C1' U B 314 alpha beta 7329 7349 7335 7332 7364 C1' U B 315 alpha beta 7359 7379 7365 7362 7394 C1' G B 316 alpha beta 7389 7412 7395 7392 7428 C1' A B 317 alpha beta 7423 7445 7429 7426 --------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------- Seq No Atom Residue Deoxyribose Ribose C1' C3' H2'1 H2'2 H2' O2' H2'1 H2'2 H2' O2' --------------------------------------------------------------------------------------------------------------------- 10 C2' U A 1 OK OK 12 8 25 11 40 C2' C A 2 OK OK 42 38 55 41 71 C2' A A 3 OK OK 73 69 88 72 104 C2' A A 4 OK OK 106 102 121 105 137 C2' U A 5 OK OK 139 135 152 138 167 C2' G A 6 OK OK 169 165 185 168 201 C2' G A 7 OK OK 203 199 219 202 235 C2' U A 8 OK OK 237 233 250 236 265 C2' A A 9 OK OK 267 263 282 266 298 C2' C A 10 OK OK 300 296 313 299 329 C2' G A 11 OK OK 331 327 347 330 363 C2' G A 12 OK OK 365 361 381 364 397 C2' U A 13 OK OK 399 395 412 398 427 C2' A A 14 OK OK 429 425 444 428 460 C2' C A 15 OK OK 462 458 475 461 491 C2' U A 16 OK OK 493 489 506 492 521 C2' U A 17 OK OK 523 519 536 522 551 C2' C A 18 OK OK 553 549 566 552 582 C2' C A 19 OK OK 584 580 597 583 613 C2' A A 20 OK OK 615 611 630 614 646 C2' U A 21 OK OK 648 644 661 647 676 C2' U A 22 OK OK 678 674 691 677 706 C2' G A 23 OK OK 708 704 724 707 740 C2' U A 24 OK OK 742 738 755 741 770 C2' C A 25 OK OK 772 768 785 771 801 C2' A A 26 OK OK 803 799 818 802 834 C2' U A 27 OK OK 836 832 849 835 864 C2' G A 28 OK OK 866 862 882 865 898 C2' U A 29 OK OK 900 896 913 899 928 C2' G A 30 OK OK 930 926 946 929 962 C2' U A 31 OK OK 964 960 977 963 992 C2' A A 32 OK OK 994 990 1009 993 1025 C2' U A 33 OK OK 1027 1023 1040 1026 1055 C2' G A 34 OK OK 1057 1053 1073 1056 1089 C2' U A 35 OK OK 1091 1087 1104 1090 1119 C2' U A 36 OK OK 1121 1117 1134 1120 1149 C2' G A 37 OK OK 1151 1147 1167 1150 1183 C2' G A 38 OK OK 1185 1181 1201 1184 1217 C2' G A 39 OK OK 1219 1215 1235 1218 1251 C2' G A 40 OK OK 1253 1249 1269 1252 1285 C2' A A 41 OK OK 1287 1283 1302 1286 1318 C2' U A 42 OK OK 1320 1316 1333 1319 1348 C2' U A 43 OK OK 1350 1346 1363 1349 1378 C2' A A 44 OK OK 1380 1376 1395 1379 1411 C2' A A 45 OK OK 1413 1409 1428 1412 1444 C2' A A 46 OK OK 1446 1442 1461 1445 1477 C2' C A 47 OK OK 1479 1475 1492 1478 1508 C2' C A 48 OK OK 1510 1506 1523 1509 1539 C2' C A 49 OK OK 1541 1537 1554 1540 1570 C2' U A 50 OK OK 1572 1568 1585 1571 1600 C2' G A 51 OK OK 1602 1598 1618 1601 1634 C2' A A 52 OK OK 1636 1632 1651 1635 1667 C2' U A 53 OK OK 1669 1665 1682 1668 1697 C2' U A 54 OK OK 1699 1695 1712 1698 1727 C2' G A 55 OK OK 1729 1725 1745 1728 1761 C2' A A 56 OK OK 1763 1759 1778 1762 1794 C2' G A 57 OK OK 1796 1792 1812 1795 1828 C2' U A 58 OK OK 1830 1826 1843 1829 1858 C2' U A 59 OK OK 1860 1856 1873 1859 1888 C2' C A 60 OK OK 1890 1886 1903 1889 1919 C2' A A 61 OK OK 1921 1917 1936 1920 1952 C2' G A 62 OK OK 1954 1950 1970 1953 1986 C2' C A 63 OK OK 1988 1984 2001 1987 2017 C2' C A 64 OK OK 2019 2015 2032 2018 2048 C2' C A 65 OK OK 2050 2046 2063 2049 2079 C2' A A 66 OK OK 2081 2077 2096 2080 2112 C2' C A 67 OK OK 2114 2110 2127 2113 2143 C2' A A 68 OK OK 2145 2141 2160 2144 2176 C2' U A 69 OK OK 2178 2174 2191 2177 2206 C2' A A 70 OK OK 2208 2204 2223 2207 2239 C2' C A 71 OK OK 2241 2237 2254 2240 2270 C2' U A 72 OK OK 2272 2268 2285 2271 2300 C2' U A 73 OK OK 2302 2298 2315 2301 2330 C2' U A 74 OK OK 2332 2328 2345 2331 2360 C2' G A 75 OK OK 2362 2358 2378 2361 2394 C2' U A 76 OK OK 2396 2392 2409 2395 2424 C2' U A 77 OK OK 2426 2422 2439 2425 2454 C2' G A 78 OK OK 2456 2452 2472 2455 2488 C2' A A 79 OK OK 2490 2486 2505 2489 2521 C2' U A 80 OK OK 2523 2519 2536 2522 2551 C2' U A 81 OK OK 2553 2549 2566 2552 2581 C2' G A 82 OK OK 2583 2579 2599 2582 2615 C2' G A 83 OK OK 2617 2613 2633 2616 2649 C2' U A 84 OK OK 2651 2647 2664 2650 2679 C2' U A 85 OK OK 2681 2677 2694 2680 2709 C2' G A 86 OK OK 2711 2707 2727 2710 2743 C2' U A 87 OK OK 2745 2741 2758 2744 2773 C2' C A 88 OK OK 2775 2771 2788 2774 2804 C2' A A 89 OK OK 2806 2802 2821 2805 2837 C2' A A 90 OK OK 2839 2835 2854 2838 2870 C2' U A 91 OK OK 2872 2868 2885 2871 2900 C2' C A 92 OK OK 2902 2898 2915 2901 2931 C2' A A 93 OK OK 2933 2929 2948 2932 2964 C2' U A 94 OK OK 2966 2962 2979 2965 2994 C2' G A 95 OK OK 2996 2992 3012 2995 3028 C2' G A 96 OK OK 3030 3026 3046 3029 3062 C2' C A 97 OK OK 3064 3060 3077 3063 3093 C2' A A 98 OK OK 3095 3091 3110 3094 3126 C2' A A 99 OK OK 3128 3124 3143 3127 3159 C2' A A 100 OK OK 3161 3157 3176 3160 3192 C2' A A 101 OK OK 3194 3190 3209 3193 3225 C2' G A 102 OK OK 3227 3223 3243 3226 3259 C2' U A 103 OK OK 3261 3257 3274 3260 3289 C2' G A 104 OK OK 3291 3287 3307 3290 3323 C2' C A 105 OK OK 3325 3321 3338 3324 3354 C2' A A 106 OK OK 3356 3352 3371 3355 3387 C2' C A 107 OK OK 3389 3385 3402 3388 3418 C2' G A 108 OK OK 3420 3416 3436 3419 3452 C2' C A 109 OK OK 3454 3450 3467 3453 3483 C2' U A 110 OK OK 3485 3481 3498 3484 3513 C2' A A 111 OK OK 3515 3511 3530 3514 3546 C2' C A 112 OK OK 3548 3544 3561 3547 3577 C2' U A 113 OK OK 3579 3575 3592 3578 3607 C2' U A 114 OK OK 3609 3605 3622 3608 3637 C2' U A 115 OK OK 3639 3635 3652 3638 3667 C2' G A 116 OK OK 3669 3665 3685 3668 3701 C2' A A 117 OK OK 3703 3699 3718 3702 3735 C2' U B 201 OK OK 3737 3733 3750 3736 3765 C2' C B 202 OK OK 3767 3763 3780 3766 3796 C2' A B 203 OK OK 3798 3794 3813 3797 3829 C2' A B 204 OK OK 3831 3827 3846 3830 3862 C2' U B 205 OK OK 3864 3860 3877 3863 3892 C2' G B 206 OK OK 3894 3890 3910 3893 3926 C2' G B 207 OK OK 3928 3924 3944 3927 3960 C2' U B 208 OK OK 3962 3958 3975 3961 3990 C2' A B 209 OK OK 3992 3988 4007 3991 4023 C2' C B 210 OK OK 4025 4021 4038 4024 4054 C2' G B 211 OK OK 4056 4052 4072 4055 4088 C2' G B 212 OK OK 4090 4086 4106 4089 4122 C2' U B 213 OK OK 4124 4120 4137 4123 4152 C2' A B 214 OK OK 4154 4150 4169 4153 4185 C2' C B 215 OK OK 4187 4183 4200 4186 4216 C2' U B 216 OK OK 4218 4214 4231 4217 4246 C2' U B 217 OK OK 4248 4244 4261 4247 4276 C2' C B 218 OK OK 4278 4274 4291 4277 4307 C2' C B 219 OK OK 4309 4305 4322 4308 4338 C2' A B 220 OK OK 4340 4336 4355 4339 4371 C2' U B 221 OK OK 4373 4369 4386 4372 4401 C2' U B 222 OK OK 4403 4399 4416 4402 4431 C2' G B 223 OK OK 4433 4429 4449 4432 4465 C2' U B 224 OK OK 4467 4463 4480 4466 4495 C2' C B 225 OK OK 4497 4493 4510 4496 4526 C2' A B 226 OK OK 4528 4524 4543 4527 4559 C2' U B 227 OK OK 4561 4557 4574 4560 4589 C2' G B 228 OK OK 4591 4587 4607 4590 4623 C2' U B 229 OK OK 4625 4621 4638 4624 4653 C2' G B 230 OK OK 4655 4651 4671 4654 4687 C2' U B 231 OK OK 4689 4685 4702 4688 4717 C2' A B 232 OK OK 4719 4715 4734 4718 4750 C2' U B 233 OK OK 4752 4748 4765 4751 4780 C2' G B 234 OK OK 4782 4778 4798 4781 4814 C2' U B 235 OK OK 4816 4812 4829 4815 4844 C2' U B 236 OK OK 4846 4842 4859 4845 4874 C2' G B 237 OK OK 4876 4872 4892 4875 4908 C2' G B 238 OK OK 4910 4906 4926 4909 4942 C2' G B 239 OK OK 4944 4940 4960 4943 4976 C2' G B 240 OK OK 4978 4974 4994 4977 5010 C2' A B 241 OK OK 5012 5008 5027 5011 5043 C2' U B 242 OK OK 5045 5041 5058 5044 5073 C2' U B 243 OK OK 5075 5071 5088 5074 5103 C2' A B 244 OK OK 5105 5101 5120 5104 5136 C2' A B 245 OK OK 5138 5134 5153 5137 5169 C2' A B 246 OK OK 5171 5167 5186 5170 5202 C2' C B 247 OK OK 5204 5200 5217 5203 5233 C2' C B 248 OK OK 5235 5231 5248 5234 5264 C2' C B 249 OK OK 5266 5262 5279 5265 5295 C2' U B 250 OK OK 5297 5293 5310 5296 5325 C2' G B 251 OK OK 5327 5323 5343 5326 5359 C2' A B 252 OK OK 5361 5357 5376 5360 5392 C2' U B 253 OK OK 5394 5390 5407 5393 5422 C2' U B 254 OK OK 5424 5420 5437 5423 5452 C2' G B 255 OK OK 5454 5450 5470 5453 5486 C2' A B 256 OK OK 5488 5484 5503 5487 5519 C2' G B 257 OK OK 5521 5517 5537 5520 5553 C2' U B 258 OK OK 5555 5551 5568 5554 5583 C2' U B 259 OK OK 5585 5581 5598 5584 5613 C2' C B 260 OK OK 5615 5611 5628 5614 5644 C2' A B 261 OK OK 5646 5642 5661 5645 5677 C2' G B 262 OK OK 5679 5675 5695 5678 5711 C2' C B 263 OK OK 5713 5709 5726 5712 5742 C2' C B 264 OK OK 5744 5740 5757 5743 5773 C2' C B 265 OK OK 5775 5771 5788 5774 5804 C2' A B 266 OK OK 5806 5802 5821 5805 5837 C2' C B 267 OK OK 5839 5835 5852 5838 5868 C2' A B 268 OK OK 5870 5866 5885 5869 5901 C2' U B 269 OK OK 5903 5899 5916 5902 5931 C2' A B 270 OK OK 5933 5929 5948 5932 5964 C2' C B 271 OK OK 5966 5962 5979 5965 5995 C2' U B 272 OK OK 5997 5993 6010 5996 6025 C2' U B 273 OK OK 6027 6023 6040 6026 6055 C2' U B 274 OK OK 6057 6053 6070 6056 6085 C2' G B 275 OK OK 6087 6083 6103 6086 6119 C2' U B 276 OK OK 6121 6117 6134 6120 6149 C2' U B 277 OK OK 6151 6147 6164 6150 6179 C2' G B 278 OK OK 6181 6177 6197 6180 6213 C2' A B 279 OK OK 6215 6211 6230 6214 6246 C2' U B 280 OK OK 6248 6244 6261 6247 6276 C2' U B 281 OK OK 6278 6274 6291 6277 6306 C2' G B 282 OK OK 6308 6304 6324 6307 6340 C2' G B 283 OK OK 6342 6338 6358 6341 6374 C2' U B 284 OK OK 6376 6372 6389 6375 6404 C2' U B 285 OK OK 6406 6402 6419 6405 6434 C2' G B 286 OK OK 6436 6432 6452 6435 6468 C2' U B 287 OK OK 6470 6466 6483 6469 6498 C2' C B 288 OK OK 6500 6496 6513 6499 6529 C2' A B 289 OK OK 6531 6527 6546 6530 6562 C2' A B 290 OK OK 6564 6560 6579 6563 6595 C2' U B 291 OK OK 6597 6593 6610 6596 6625 C2' C B 292 OK OK 6627 6623 6640 6626 6656 C2' A B 293 OK OK 6658 6654 6673 6657 6689 C2' U B 294 OK OK 6691 6687 6704 6690 6719 C2' G B 295 OK OK 6721 6717 6737 6720 6753 C2' G B 296 OK OK 6755 6751 6771 6754 6787 C2' C B 297 OK OK 6789 6785 6802 6788 6818 C2' A B 298 OK OK 6820 6816 6835 6819 6851 C2' A B 299 OK OK 6853 6849 6868 6852 6884 C2' A B 300 OK OK 6886 6882 6901 6885 6917 C2' A B 301 OK OK 6919 6915 6934 6918 6950 C2' G B 302 OK OK 6952 6948 6968 6951 6984 C2' U B 303 OK OK 6986 6982 6999 6985 7014 C2' G B 304 OK OK 7016 7012 7032 7015 7048 C2' C B 305 OK OK 7050 7046 7063 7049 7079 C2' A B 306 OK OK 7081 7077 7096 7080 7112 C2' C B 307 OK OK 7114 7110 7127 7113 7143 C2' G B 308 OK OK 7145 7141 7161 7144 7177 C2' C B 309 OK OK 7179 7175 7192 7178 7208 C2' U B 310 OK OK 7210 7206 7223 7209 7238 C2' A B 311 OK OK 7240 7236 7255 7239 7271 C2' C B 312 OK OK 7273 7269 7286 7272 7302 C2' U B 313 OK OK 7304 7300 7317 7303 7332 C2' U B 314 OK OK 7334 7330 7347 7333 7362 C2' U B 315 OK OK 7364 7360 7377 7363 7392 C2' G B 316 OK OK 7394 7390 7410 7393 7426 C2' A B 317 OK OK 7428 7424 7443 7427 --------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------- Seq No Atom Residue H3' O3' C4' H3' O3' C2' --------------------------------------------------------------------------------- 8 C3' U A 1 OK OK 6 24 9 10 38 C3' C A 2 OK OK 36 54 39 40 69 C3' A A 3 OK OK 67 87 70 71 102 C3' A A 4 OK OK 100 120 103 104 135 C3' U A 5 OK OK 133 151 136 137 165 C3' G A 6 OK OK 163 184 166 167 199 C3' G A 7 OK OK 197 218 200 201 233 C3' U A 8 OK OK 231 249 234 235 263 C3' A A 9 OK OK 261 281 264 265 296 C3' C A 10 OK OK 294 312 297 298 327 C3' G A 11 OK OK 325 346 328 329 361 C3' G A 12 OK OK 359 380 362 363 395 C3' U A 13 OK OK 393 411 396 397 425 C3' A A 14 OK OK 423 443 426 427 458 C3' C A 15 OK OK 456 474 459 460 489 C3' U A 16 OK OK 487 505 490 491 519 C3' U A 17 OK OK 517 535 520 521 549 C3' C A 18 OK OK 547 565 550 551 580 C3' C A 19 OK OK 578 596 581 582 611 C3' A A 20 OK OK 609 629 612 613 644 C3' U A 21 OK OK 642 660 645 646 674 C3' U A 22 OK OK 672 690 675 676 704 C3' G A 23 OK OK 702 723 705 706 738 C3' U A 24 OK OK 736 754 739 740 768 C3' C A 25 OK OK 766 784 769 770 799 C3' A A 26 OK OK 797 817 800 801 832 C3' U A 27 OK OK 830 848 833 834 862 C3' G A 28 OK OK 860 881 863 864 896 C3' U A 29 OK OK 894 912 897 898 926 C3' G A 30 OK OK 924 945 927 928 960 C3' U A 31 OK OK 958 976 961 962 990 C3' A A 32 OK OK 988 1008 991 992 1023 C3' U A 33 OK OK 1021 1039 1024 1025 1053 C3' G A 34 OK OK 1051 1072 1054 1055 1087 C3' U A 35 OK OK 1085 1103 1088 1089 1117 C3' U A 36 OK OK 1115 1133 1118 1119 1147 C3' G A 37 OK OK 1145 1166 1148 1149 1181 C3' G A 38 OK OK 1179 1200 1182 1183 1215 C3' G A 39 OK OK 1213 1234 1216 1217 1249 C3' G A 40 OK OK 1247 1268 1250 1251 1283 C3' A A 41 OK OK 1281 1301 1284 1285 1316 C3' U A 42 OK OK 1314 1332 1317 1318 1346 C3' U A 43 OK OK 1344 1362 1347 1348 1376 C3' A A 44 OK OK 1374 1394 1377 1378 1409 C3' A A 45 OK OK 1407 1427 1410 1411 1442 C3' A A 46 OK OK 1440 1460 1443 1444 1475 C3' C A 47 OK OK 1473 1491 1476 1477 1506 C3' C A 48 OK OK 1504 1522 1507 1508 1537 C3' C A 49 OK OK 1535 1553 1538 1539 1568 C3' U A 50 OK OK 1566 1584 1569 1570 1598 C3' G A 51 OK OK 1596 1617 1599 1600 1632 C3' A A 52 OK OK 1630 1650 1633 1634 1665 C3' U A 53 OK OK 1663 1681 1666 1667 1695 C3' U A 54 OK OK 1693 1711 1696 1697 1725 C3' G A 55 OK OK 1723 1744 1726 1727 1759 C3' A A 56 OK OK 1757 1777 1760 1761 1792 C3' G A 57 OK OK 1790 1811 1793 1794 1826 C3' U A 58 OK OK 1824 1842 1827 1828 1856 C3' U A 59 OK OK 1854 1872 1857 1858 1886 C3' C A 60 OK OK 1884 1902 1887 1888 1917 C3' A A 61 OK OK 1915 1935 1918 1919 1950 C3' G A 62 OK OK 1948 1969 1951 1952 1984 C3' C A 63 OK OK 1982 2000 1985 1986 2015 C3' C A 64 OK OK 2013 2031 2016 2017 2046 C3' C A 65 OK OK 2044 2062 2047 2048 2077 C3' A A 66 OK OK 2075 2095 2078 2079 2110 C3' C A 67 OK OK 2108 2126 2111 2112 2141 C3' A A 68 OK OK 2139 2159 2142 2143 2174 C3' U A 69 OK OK 2172 2190 2175 2176 2204 C3' A A 70 OK OK 2202 2222 2205 2206 2237 C3' C A 71 OK OK 2235 2253 2238 2239 2268 C3' U A 72 OK OK 2266 2284 2269 2270 2298 C3' U A 73 OK OK 2296 2314 2299 2300 2328 C3' U A 74 OK OK 2326 2344 2329 2330 2358 C3' G A 75 OK OK 2356 2377 2359 2360 2392 C3' U A 76 OK OK 2390 2408 2393 2394 2422 C3' U A 77 OK OK 2420 2438 2423 2424 2452 C3' G A 78 OK OK 2450 2471 2453 2454 2486 C3' A A 79 OK OK 2484 2504 2487 2488 2519 C3' U A 80 OK OK 2517 2535 2520 2521 2549 C3' U A 81 OK OK 2547 2565 2550 2551 2579 C3' G A 82 OK OK 2577 2598 2580 2581 2613 C3' G A 83 OK OK 2611 2632 2614 2615 2647 C3' U A 84 OK OK 2645 2663 2648 2649 2677 C3' U A 85 OK OK 2675 2693 2678 2679 2707 C3' G A 86 OK OK 2705 2726 2708 2709 2741 C3' U A 87 OK OK 2739 2757 2742 2743 2771 C3' C A 88 OK OK 2769 2787 2772 2773 2802 C3' A A 89 OK OK 2800 2820 2803 2804 2835 C3' A A 90 OK OK 2833 2853 2836 2837 2868 C3' U A 91 OK OK 2866 2884 2869 2870 2898 C3' C A 92 OK OK 2896 2914 2899 2900 2929 C3' A A 93 OK OK 2927 2947 2930 2931 2962 C3' U A 94 OK OK 2960 2978 2963 2964 2992 C3' G A 95 OK OK 2990 3011 2993 2994 3026 C3' G A 96 OK OK 3024 3045 3027 3028 3060 C3' C A 97 OK OK 3058 3076 3061 3062 3091 C3' A A 98 OK OK 3089 3109 3092 3093 3124 C3' A A 99 OK OK 3122 3142 3125 3126 3157 C3' A A 100 OK OK 3155 3175 3158 3159 3190 C3' A A 101 OK OK 3188 3208 3191 3192 3223 C3' G A 102 OK OK 3221 3242 3224 3225 3257 C3' U A 103 OK OK 3255 3273 3258 3259 3287 C3' G A 104 OK OK 3285 3306 3288 3289 3321 C3' C A 105 OK OK 3319 3337 3322 3323 3352 C3' A A 106 OK OK 3350 3370 3353 3354 3385 C3' C A 107 OK OK 3383 3401 3386 3387 3416 C3' G A 108 OK OK 3414 3435 3417 3418 3450 C3' C A 109 OK OK 3448 3466 3451 3452 3481 C3' U A 110 OK OK 3479 3497 3482 3483 3511 C3' A A 111 OK OK 3509 3529 3512 3513 3544 C3' C A 112 OK OK 3542 3560 3545 3546 3575 C3' U A 113 OK OK 3573 3591 3576 3577 3605 C3' U A 114 OK OK 3603 3621 3606 3607 3635 C3' U A 115 OK OK 3633 3651 3636 3637 3665 C3' G A 116 OK OK 3663 3684 3666 3667 3699 C3' A A 117 OK OK 3697 3717 3700 3701 3733 C3' U B 201 OK OK 3731 3749 3734 3735 3763 C3' C B 202 OK OK 3761 3779 3764 3765 3794 C3' A B 203 OK OK 3792 3812 3795 3796 3827 C3' A B 204 OK OK 3825 3845 3828 3829 3860 C3' U B 205 OK OK 3858 3876 3861 3862 3890 C3' G B 206 OK OK 3888 3909 3891 3892 3924 C3' G B 207 OK OK 3922 3943 3925 3926 3958 C3' U B 208 OK OK 3956 3974 3959 3960 3988 C3' A B 209 OK OK 3986 4006 3989 3990 4021 C3' C B 210 OK OK 4019 4037 4022 4023 4052 C3' G B 211 OK OK 4050 4071 4053 4054 4086 C3' G B 212 OK OK 4084 4105 4087 4088 4120 C3' U B 213 OK OK 4118 4136 4121 4122 4150 C3' A B 214 OK OK 4148 4168 4151 4152 4183 C3' C B 215 OK OK 4181 4199 4184 4185 4214 C3' U B 216 OK OK 4212 4230 4215 4216 4244 C3' U B 217 OK OK 4242 4260 4245 4246 4274 C3' C B 218 OK OK 4272 4290 4275 4276 4305 C3' C B 219 OK OK 4303 4321 4306 4307 4336 C3' A B 220 OK OK 4334 4354 4337 4338 4369 C3' U B 221 OK OK 4367 4385 4370 4371 4399 C3' U B 222 OK OK 4397 4415 4400 4401 4429 C3' G B 223 OK OK 4427 4448 4430 4431 4463 C3' U B 224 OK OK 4461 4479 4464 4465 4493 C3' C B 225 OK OK 4491 4509 4494 4495 4524 C3' A B 226 OK OK 4522 4542 4525 4526 4557 C3' U B 227 OK OK 4555 4573 4558 4559 4587 C3' G B 228 OK OK 4585 4606 4588 4589 4621 C3' U B 229 OK OK 4619 4637 4622 4623 4651 C3' G B 230 OK OK 4649 4670 4652 4653 4685 C3' U B 231 OK OK 4683 4701 4686 4687 4715 C3' A B 232 OK OK 4713 4733 4716 4717 4748 C3' U B 233 OK OK 4746 4764 4749 4750 4778 C3' G B 234 OK OK 4776 4797 4779 4780 4812 C3' U B 235 OK OK 4810 4828 4813 4814 4842 C3' U B 236 OK OK 4840 4858 4843 4844 4872 C3' G B 237 OK OK 4870 4891 4873 4874 4906 C3' G B 238 OK OK 4904 4925 4907 4908 4940 C3' G B 239 OK OK 4938 4959 4941 4942 4974 C3' G B 240 OK OK 4972 4993 4975 4976 5008 C3' A B 241 OK OK 5006 5026 5009 5010 5041 C3' U B 242 OK OK 5039 5057 5042 5043 5071 C3' U B 243 OK OK 5069 5087 5072 5073 5101 C3' A B 244 OK OK 5099 5119 5102 5103 5134 C3' A B 245 OK OK 5132 5152 5135 5136 5167 C3' A B 246 OK OK 5165 5185 5168 5169 5200 C3' C B 247 OK OK 5198 5216 5201 5202 5231 C3' C B 248 OK OK 5229 5247 5232 5233 5262 C3' C B 249 OK OK 5260 5278 5263 5264 5293 C3' U B 250 OK OK 5291 5309 5294 5295 5323 C3' G B 251 OK OK 5321 5342 5324 5325 5357 C3' A B 252 OK OK 5355 5375 5358 5359 5390 C3' U B 253 OK OK 5388 5406 5391 5392 5420 C3' U B 254 OK OK 5418 5436 5421 5422 5450 C3' G B 255 OK OK 5448 5469 5451 5452 5484 C3' A B 256 OK OK 5482 5502 5485 5486 5517 C3' G B 257 OK OK 5515 5536 5518 5519 5551 C3' U B 258 OK OK 5549 5567 5552 5553 5581 C3' U B 259 OK OK 5579 5597 5582 5583 5611 C3' C B 260 OK OK 5609 5627 5612 5613 5642 C3' A B 261 OK OK 5640 5660 5643 5644 5675 C3' G B 262 OK OK 5673 5694 5676 5677 5709 C3' C B 263 OK OK 5707 5725 5710 5711 5740 C3' C B 264 OK OK 5738 5756 5741 5742 5771 C3' C B 265 OK OK 5769 5787 5772 5773 5802 C3' A B 266 OK OK 5800 5820 5803 5804 5835 C3' C B 267 OK OK 5833 5851 5836 5837 5866 C3' A B 268 OK OK 5864 5884 5867 5868 5899 C3' U B 269 OK OK 5897 5915 5900 5901 5929 C3' A B 270 OK OK 5927 5947 5930 5931 5962 C3' C B 271 OK OK 5960 5978 5963 5964 5993 C3' U B 272 OK OK 5991 6009 5994 5995 6023 C3' U B 273 OK OK 6021 6039 6024 6025 6053 C3' U B 274 OK OK 6051 6069 6054 6055 6083 C3' G B 275 OK OK 6081 6102 6084 6085 6117 C3' U B 276 OK OK 6115 6133 6118 6119 6147 C3' U B 277 OK OK 6145 6163 6148 6149 6177 C3' G B 278 OK OK 6175 6196 6178 6179 6211 C3' A B 279 OK OK 6209 6229 6212 6213 6244 C3' U B 280 OK OK 6242 6260 6245 6246 6274 C3' U B 281 OK OK 6272 6290 6275 6276 6304 C3' G B 282 OK OK 6302 6323 6305 6306 6338 C3' G B 283 OK OK 6336 6357 6339 6340 6372 C3' U B 284 OK OK 6370 6388 6373 6374 6402 C3' U B 285 OK OK 6400 6418 6403 6404 6432 C3' G B 286 OK OK 6430 6451 6433 6434 6466 C3' U B 287 OK OK 6464 6482 6467 6468 6496 C3' C B 288 OK OK 6494 6512 6497 6498 6527 C3' A B 289 OK OK 6525 6545 6528 6529 6560 C3' A B 290 OK OK 6558 6578 6561 6562 6593 C3' U B 291 OK OK 6591 6609 6594 6595 6623 C3' C B 292 OK OK 6621 6639 6624 6625 6654 C3' A B 293 OK OK 6652 6672 6655 6656 6687 C3' U B 294 OK OK 6685 6703 6688 6689 6717 C3' G B 295 OK OK 6715 6736 6718 6719 6751 C3' G B 296 OK OK 6749 6770 6752 6753 6785 C3' C B 297 OK OK 6783 6801 6786 6787 6816 C3' A B 298 OK OK 6814 6834 6817 6818 6849 C3' A B 299 OK OK 6847 6867 6850 6851 6882 C3' A B 300 OK OK 6880 6900 6883 6884 6915 C3' A B 301 OK OK 6913 6933 6916 6917 6948 C3' G B 302 OK OK 6946 6967 6949 6950 6982 C3' U B 303 OK OK 6980 6998 6983 6984 7012 C3' G B 304 OK OK 7010 7031 7013 7014 7046 C3' C B 305 OK OK 7044 7062 7047 7048 7077 C3' A B 306 OK OK 7075 7095 7078 7079 7110 C3' C B 307 OK OK 7108 7126 7111 7112 7141 C3' G B 308 OK OK 7139 7160 7142 7143 7175 C3' C B 309 OK OK 7173 7191 7176 7177 7206 C3' U B 310 OK OK 7204 7222 7207 7208 7236 C3' A B 311 OK OK 7234 7254 7237 7238 7269 C3' C B 312 OK OK 7267 7285 7270 7271 7300 C3' U B 313 OK OK 7298 7316 7301 7302 7330 C3' U B 314 OK OK 7328 7346 7331 7332 7360 C3' U B 315 OK OK 7358 7376 7361 7362 7390 C3' G B 316 OK OK 7388 7409 7391 7392 7424 C3' A B 317 OK OK 7422 7442 7425 7426 --------------------------------------------------------------------------------- --------------------------------------------------------------------------------- Seq No Atom Residue H4' C5' C3' H4' C5' O4' --------------------------------------------------------------------------------- 6 C4' U A 1 OK OK 8 23 5 7 36 C4' C A 2 OK OK 38 53 35 37 67 C4' A A 3 OK OK 69 86 66 68 100 C4' A A 4 OK OK 102 119 99 101 133 C4' U A 5 OK OK 135 150 132 134 163 C4' G A 6 OK OK 165 183 162 164 197 C4' G A 7 OK OK 199 217 196 198 231 C4' U A 8 OK OK 233 248 230 232 261 C4' A A 9 OK OK 263 280 260 262 294 C4' C A 10 OK OK 296 311 293 295 325 C4' G A 11 OK OK 327 345 324 326 359 C4' G A 12 OK OK 361 379 358 360 393 C4' U A 13 OK OK 395 410 392 394 423 C4' A A 14 OK OK 425 442 422 424 456 C4' C A 15 OK OK 458 473 455 457 487 C4' U A 16 OK OK 489 504 486 488 517 C4' U A 17 OK OK 519 534 516 518 547 C4' C A 18 OK OK 549 564 546 548 578 C4' C A 19 OK OK 580 595 577 579 609 C4' A A 20 OK OK 611 628 608 610 642 C4' U A 21 OK OK 644 659 641 643 672 C4' U A 22 OK OK 674 689 671 673 702 C4' G A 23 OK OK 704 722 701 703 736 C4' U A 24 OK OK 738 753 735 737 766 C4' C A 25 OK OK 768 783 765 767 797 C4' A A 26 OK OK 799 816 796 798 830 C4' U A 27 OK OK 832 847 829 831 860 C4' G A 28 OK OK 862 880 859 861 894 C4' U A 29 OK OK 896 911 893 895 924 C4' G A 30 OK OK 926 944 923 925 958 C4' U A 31 OK OK 960 975 957 959 988 C4' A A 32 OK OK 990 1007 987 989 1021 C4' U A 33 OK OK 1023 1038 1020 1022 1051 C4' G A 34 OK OK 1053 1071 1050 1052 1085 C4' U A 35 OK OK 1087 1102 1084 1086 1115 C4' U A 36 OK OK 1117 1132 1114 1116 1145 C4' G A 37 OK OK 1147 1165 1144 1146 1179 C4' G A 38 OK OK 1181 1199 1178 1180 1213 C4' G A 39 OK OK 1215 1233 1212 1214 1247 C4' G A 40 OK OK 1249 1267 1246 1248 1281 C4' A A 41 OK OK 1283 1300 1280 1282 1314 C4' U A 42 OK OK 1316 1331 1313 1315 1344 C4' U A 43 OK OK 1346 1361 1343 1345 1374 C4' A A 44 OK OK 1376 1393 1373 1375 1407 C4' A A 45 OK OK 1409 1426 1406 1408 1440 C4' A A 46 OK OK 1442 1459 1439 1441 1473 C4' C A 47 OK OK 1475 1490 1472 1474 1504 C4' C A 48 OK OK 1506 1521 1503 1505 1535 C4' C A 49 OK OK 1537 1552 1534 1536 1566 C4' U A 50 OK OK 1568 1583 1565 1567 1596 C4' G A 51 OK OK 1598 1616 1595 1597 1630 C4' A A 52 OK OK 1632 1649 1629 1631 1663 C4' U A 53 OK OK 1665 1680 1662 1664 1693 C4' U A 54 OK OK 1695 1710 1692 1694 1723 C4' G A 55 OK OK 1725 1743 1722 1724 1757 C4' A A 56 OK OK 1759 1776 1756 1758 1790 C4' G A 57 OK OK 1792 1810 1789 1791 1824 C4' U A 58 OK OK 1826 1841 1823 1825 1854 C4' U A 59 OK OK 1856 1871 1853 1855 1884 C4' C A 60 OK OK 1886 1901 1883 1885 1915 C4' A A 61 OK OK 1917 1934 1914 1916 1948 C4' G A 62 OK OK 1950 1968 1947 1949 1982 C4' C A 63 OK OK 1984 1999 1981 1983 2013 C4' C A 64 OK OK 2015 2030 2012 2014 2044 C4' C A 65 OK OK 2046 2061 2043 2045 2075 C4' A A 66 OK OK 2077 2094 2074 2076 2108 C4' C A 67 OK OK 2110 2125 2107 2109 2139 C4' A A 68 OK OK 2141 2158 2138 2140 2172 C4' U A 69 OK OK 2174 2189 2171 2173 2202 C4' A A 70 OK OK 2204 2221 2201 2203 2235 C4' C A 71 OK OK 2237 2252 2234 2236 2266 C4' U A 72 OK OK 2268 2283 2265 2267 2296 C4' U A 73 OK OK 2298 2313 2295 2297 2326 C4' U A 74 OK OK 2328 2343 2325 2327 2356 C4' G A 75 OK OK 2358 2376 2355 2357 2390 C4' U A 76 OK OK 2392 2407 2389 2391 2420 C4' U A 77 OK OK 2422 2437 2419 2421 2450 C4' G A 78 OK OK 2452 2470 2449 2451 2484 C4' A A 79 OK OK 2486 2503 2483 2485 2517 C4' U A 80 OK OK 2519 2534 2516 2518 2547 C4' U A 81 OK OK 2549 2564 2546 2548 2577 C4' G A 82 OK OK 2579 2597 2576 2578 2611 C4' G A 83 OK OK 2613 2631 2610 2612 2645 C4' U A 84 OK OK 2647 2662 2644 2646 2675 C4' U A 85 OK OK 2677 2692 2674 2676 2705 C4' G A 86 OK OK 2707 2725 2704 2706 2739 C4' U A 87 OK OK 2741 2756 2738 2740 2769 C4' C A 88 OK OK 2771 2786 2768 2770 2800 C4' A A 89 OK OK 2802 2819 2799 2801 2833 C4' A A 90 OK OK 2835 2852 2832 2834 2866 C4' U A 91 OK OK 2868 2883 2865 2867 2896 C4' C A 92 OK OK 2898 2913 2895 2897 2927 C4' A A 93 OK OK 2929 2946 2926 2928 2960 C4' U A 94 OK OK 2962 2977 2959 2961 2990 C4' G A 95 OK OK 2992 3010 2989 2991 3024 C4' G A 96 OK OK 3026 3044 3023 3025 3058 C4' C A 97 OK OK 3060 3075 3057 3059 3089 C4' A A 98 OK OK 3091 3108 3088 3090 3122 C4' A A 99 OK OK 3124 3141 3121 3123 3155 C4' A A 100 OK OK 3157 3174 3154 3156 3188 C4' A A 101 OK OK 3190 3207 3187 3189 3221 C4' G A 102 OK OK 3223 3241 3220 3222 3255 C4' U A 103 OK OK 3257 3272 3254 3256 3285 C4' G A 104 OK OK 3287 3305 3284 3286 3319 C4' C A 105 OK OK 3321 3336 3318 3320 3350 C4' A A 106 OK OK 3352 3369 3349 3351 3383 C4' C A 107 OK OK 3385 3400 3382 3384 3414 C4' G A 108 OK OK 3416 3434 3413 3415 3448 C4' C A 109 OK OK 3450 3465 3447 3449 3479 C4' U A 110 OK OK 3481 3496 3478 3480 3509 C4' A A 111 OK OK 3511 3528 3508 3510 3542 C4' C A 112 OK OK 3544 3559 3541 3543 3573 C4' U A 113 OK OK 3575 3590 3572 3574 3603 C4' U A 114 OK OK 3605 3620 3602 3604 3633 C4' U A 115 OK OK 3635 3650 3632 3634 3663 C4' G A 116 OK OK 3665 3683 3662 3664 3697 C4' A A 117 OK OK 3699 3716 3696 3698 3731 C4' U B 201 OK OK 3733 3748 3730 3732 3761 C4' C B 202 OK OK 3763 3778 3760 3762 3792 C4' A B 203 OK OK 3794 3811 3791 3793 3825 C4' A B 204 OK OK 3827 3844 3824 3826 3858 C4' U B 205 OK OK 3860 3875 3857 3859 3888 C4' G B 206 OK OK 3890 3908 3887 3889 3922 C4' G B 207 OK OK 3924 3942 3921 3923 3956 C4' U B 208 OK OK 3958 3973 3955 3957 3986 C4' A B 209 OK OK 3988 4005 3985 3987 4019 C4' C B 210 OK OK 4021 4036 4018 4020 4050 C4' G B 211 OK OK 4052 4070 4049 4051 4084 C4' G B 212 OK OK 4086 4104 4083 4085 4118 C4' U B 213 OK OK 4120 4135 4117 4119 4148 C4' A B 214 OK OK 4150 4167 4147 4149 4181 C4' C B 215 OK OK 4183 4198 4180 4182 4212 C4' U B 216 OK OK 4214 4229 4211 4213 4242 C4' U B 217 OK OK 4244 4259 4241 4243 4272 C4' C B 218 OK OK 4274 4289 4271 4273 4303 C4' C B 219 OK OK 4305 4320 4302 4304 4334 C4' A B 220 OK OK 4336 4353 4333 4335 4367 C4' U B 221 OK OK 4369 4384 4366 4368 4397 C4' U B 222 OK OK 4399 4414 4396 4398 4427 C4' G B 223 OK OK 4429 4447 4426 4428 4461 C4' U B 224 OK OK 4463 4478 4460 4462 4491 C4' C B 225 OK OK 4493 4508 4490 4492 4522 C4' A B 226 OK OK 4524 4541 4521 4523 4555 C4' U B 227 OK OK 4557 4572 4554 4556 4585 C4' G B 228 OK OK 4587 4605 4584 4586 4619 C4' U B 229 OK OK 4621 4636 4618 4620 4649 C4' G B 230 OK OK 4651 4669 4648 4650 4683 C4' U B 231 OK OK 4685 4700 4682 4684 4713 C4' A B 232 OK OK 4715 4732 4712 4714 4746 C4' U B 233 OK OK 4748 4763 4745 4747 4776 C4' G B 234 OK OK 4778 4796 4775 4777 4810 C4' U B 235 OK OK 4812 4827 4809 4811 4840 C4' U B 236 OK OK 4842 4857 4839 4841 4870 C4' G B 237 OK OK 4872 4890 4869 4871 4904 C4' G B 238 OK OK 4906 4924 4903 4905 4938 C4' G B 239 OK OK 4940 4958 4937 4939 4972 C4' G B 240 OK OK 4974 4992 4971 4973 5006 C4' A B 241 OK OK 5008 5025 5005 5007 5039 C4' U B 242 OK OK 5041 5056 5038 5040 5069 C4' U B 243 OK OK 5071 5086 5068 5070 5099 C4' A B 244 OK OK 5101 5118 5098 5100 5132 C4' A B 245 OK OK 5134 5151 5131 5133 5165 C4' A B 246 OK OK 5167 5184 5164 5166 5198 C4' C B 247 OK OK 5200 5215 5197 5199 5229 C4' C B 248 OK OK 5231 5246 5228 5230 5260 C4' C B 249 OK OK 5262 5277 5259 5261 5291 C4' U B 250 OK OK 5293 5308 5290 5292 5321 C4' G B 251 OK OK 5323 5341 5320 5322 5355 C4' A B 252 OK OK 5357 5374 5354 5356 5388 C4' U B 253 OK OK 5390 5405 5387 5389 5418 C4' U B 254 OK OK 5420 5435 5417 5419 5448 C4' G B 255 OK OK 5450 5468 5447 5449 5482 C4' A B 256 OK OK 5484 5501 5481 5483 5515 C4' G B 257 OK OK 5517 5535 5514 5516 5549 C4' U B 258 OK OK 5551 5566 5548 5550 5579 C4' U B 259 OK OK 5581 5596 5578 5580 5609 C4' C B 260 OK OK 5611 5626 5608 5610 5640 C4' A B 261 OK OK 5642 5659 5639 5641 5673 C4' G B 262 OK OK 5675 5693 5672 5674 5707 C4' C B 263 OK OK 5709 5724 5706 5708 5738 C4' C B 264 OK OK 5740 5755 5737 5739 5769 C4' C B 265 OK OK 5771 5786 5768 5770 5800 C4' A B 266 OK OK 5802 5819 5799 5801 5833 C4' C B 267 OK OK 5835 5850 5832 5834 5864 C4' A B 268 OK OK 5866 5883 5863 5865 5897 C4' U B 269 OK OK 5899 5914 5896 5898 5927 C4' A B 270 OK OK 5929 5946 5926 5928 5960 C4' C B 271 OK OK 5962 5977 5959 5961 5991 C4' U B 272 OK OK 5993 6008 5990 5992 6021 C4' U B 273 OK OK 6023 6038 6020 6022 6051 C4' U B 274 OK OK 6053 6068 6050 6052 6081 C4' G B 275 OK OK 6083 6101 6080 6082 6115 C4' U B 276 OK OK 6117 6132 6114 6116 6145 C4' U B 277 OK OK 6147 6162 6144 6146 6175 C4' G B 278 OK OK 6177 6195 6174 6176 6209 C4' A B 279 OK OK 6211 6228 6208 6210 6242 C4' U B 280 OK OK 6244 6259 6241 6243 6272 C4' U B 281 OK OK 6274 6289 6271 6273 6302 C4' G B 282 OK OK 6304 6322 6301 6303 6336 C4' G B 283 OK OK 6338 6356 6335 6337 6370 C4' U B 284 OK OK 6372 6387 6369 6371 6400 C4' U B 285 OK OK 6402 6417 6399 6401 6430 C4' G B 286 OK OK 6432 6450 6429 6431 6464 C4' U B 287 OK OK 6466 6481 6463 6465 6494 C4' C B 288 OK OK 6496 6511 6493 6495 6525 C4' A B 289 OK OK 6527 6544 6524 6526 6558 C4' A B 290 OK OK 6560 6577 6557 6559 6591 C4' U B 291 OK OK 6593 6608 6590 6592 6621 C4' C B 292 OK OK 6623 6638 6620 6622 6652 C4' A B 293 OK OK 6654 6671 6651 6653 6685 C4' U B 294 OK OK 6687 6702 6684 6686 6715 C4' G B 295 OK OK 6717 6735 6714 6716 6749 C4' G B 296 OK OK 6751 6769 6748 6750 6783 C4' C B 297 OK OK 6785 6800 6782 6784 6814 C4' A B 298 OK OK 6816 6833 6813 6815 6847 C4' A B 299 OK OK 6849 6866 6846 6848 6880 C4' A B 300 OK OK 6882 6899 6879 6881 6913 C4' A B 301 OK OK 6915 6932 6912 6914 6946 C4' G B 302 OK OK 6948 6966 6945 6947 6980 C4' U B 303 OK OK 6982 6997 6979 6981 7010 C4' G B 304 OK OK 7012 7030 7009 7011 7044 C4' C B 305 OK OK 7046 7061 7043 7045 7075 C4' A B 306 OK OK 7077 7094 7074 7076 7108 C4' C B 307 OK OK 7110 7125 7107 7109 7139 C4' G B 308 OK OK 7141 7159 7138 7140 7173 C4' C B 309 OK OK 7175 7190 7172 7174 7204 C4' U B 310 OK OK 7206 7221 7203 7205 7234 C4' A B 311 OK OK 7236 7253 7233 7235 7267 C4' C B 312 OK OK 7269 7284 7266 7268 7298 C4' U B 313 OK OK 7300 7315 7297 7299 7328 C4' U B 314 OK OK 7330 7345 7327 7329 7358 C4' U B 315 OK OK 7360 7375 7357 7359 7388 C4' G B 316 OK OK 7390 7408 7387 7389 7422 C4' A B 317 OK OK 7424 7441 7421 7423 --------------------------------------------------------------------------------- --------------------------------------------------------------------------------- Seq No Atom Residue H5'1 H5'2 O5' H5'1 H5'2 C4' --------------------------------------------------------------------------------- 5 C5' U A 1 OK OK 4 21 22 6 35 C5' C A 2 OK OK 34 51 52 36 66 C5' A A 3 OK OK 65 84 85 67 99 C5' A A 4 OK OK 98 117 118 100 132 C5' U A 5 OK OK 131 148 149 133 162 C5' G A 6 OK OK 161 181 182 163 196 C5' G A 7 OK OK 195 215 216 197 230 C5' U A 8 OK OK 229 246 247 231 260 C5' A A 9 OK OK 259 278 279 261 293 C5' C A 10 OK OK 292 309 310 294 324 C5' G A 11 OK OK 323 343 344 325 358 C5' G A 12 OK OK 357 377 378 359 392 C5' U A 13 OK OK 391 408 409 393 422 C5' A A 14 OK OK 421 440 441 423 455 C5' C A 15 OK OK 454 471 472 456 486 C5' U A 16 OK OK 485 502 503 487 516 C5' U A 17 OK OK 515 532 533 517 546 C5' C A 18 OK OK 545 562 563 547 577 C5' C A 19 OK OK 576 593 594 578 608 C5' A A 20 OK OK 607 626 627 609 641 C5' U A 21 OK OK 640 657 658 642 671 C5' U A 22 OK OK 670 687 688 672 701 C5' G A 23 OK OK 700 720 721 702 735 C5' U A 24 OK OK 734 751 752 736 765 C5' C A 25 OK OK 764 781 782 766 796 C5' A A 26 OK OK 795 814 815 797 829 C5' U A 27 OK OK 828 845 846 830 859 C5' G A 28 OK OK 858 878 879 860 893 C5' U A 29 OK OK 892 909 910 894 923 C5' G A 30 OK OK 922 942 943 924 957 C5' U A 31 OK OK 956 973 974 958 987 C5' A A 32 OK OK 986 1005 1006 988 1020 C5' U A 33 OK OK 1019 1036 1037 1021 1050 C5' G A 34 OK OK 1049 1069 1070 1051 1084 C5' U A 35 OK OK 1083 1100 1101 1085 1114 C5' U A 36 OK OK 1113 1130 1131 1115 1144 C5' G A 37 OK OK 1143 1163 1164 1145 1178 C5' G A 38 OK OK 1177 1197 1198 1179 1212 C5' G A 39 OK OK 1211 1231 1232 1213 1246 C5' G A 40 OK OK 1245 1265 1266 1247 1280 C5' A A 41 OK OK 1279 1298 1299 1281 1313 C5' U A 42 OK OK 1312 1329 1330 1314 1343 C5' U A 43 OK OK 1342 1359 1360 1344 1373 C5' A A 44 OK OK 1372 1391 1392 1374 1406 C5' A A 45 OK OK 1405 1424 1425 1407 1439 C5' A A 46 OK OK 1438 1457 1458 1440 1472 C5' C A 47 OK OK 1471 1488 1489 1473 1503 C5' C A 48 OK OK 1502 1519 1520 1504 1534 C5' C A 49 OK OK 1533 1550 1551 1535 1565 C5' U A 50 OK OK 1564 1581 1582 1566 1595 C5' G A 51 OK OK 1594 1614 1615 1596 1629 C5' A A 52 OK OK 1628 1647 1648 1630 1662 C5' U A 53 OK OK 1661 1678 1679 1663 1692 C5' U A 54 OK OK 1691 1708 1709 1693 1722 C5' G A 55 OK OK 1721 1741 1742 1723 1756 C5' A A 56 OK OK 1755 1774 1775 1757 1789 C5' G A 57 OK OK 1788 1808 1809 1790 1823 C5' U A 58 OK OK 1822 1839 1840 1824 1853 C5' U A 59 OK OK 1852 1869 1870 1854 1883 C5' C A 60 OK OK 1882 1899 1900 1884 1914 C5' A A 61 OK OK 1913 1932 1933 1915 1947 C5' G A 62 OK OK 1946 1966 1967 1948 1981 C5' C A 63 OK OK 1980 1997 1998 1982 2012 C5' C A 64 OK OK 2011 2028 2029 2013 2043 C5' C A 65 OK OK 2042 2059 2060 2044 2074 C5' A A 66 OK OK 2073 2092 2093 2075 2107 C5' C A 67 OK OK 2106 2123 2124 2108 2138 C5' A A 68 OK OK 2137 2156 2157 2139 2171 C5' U A 69 OK OK 2170 2187 2188 2172 2201 C5' A A 70 OK OK 2200 2219 2220 2202 2234 C5' C A 71 OK OK 2233 2250 2251 2235 2265 C5' U A 72 OK OK 2264 2281 2282 2266 2295 C5' U A 73 OK OK 2294 2311 2312 2296 2325 C5' U A 74 OK OK 2324 2341 2342 2326 2355 C5' G A 75 OK OK 2354 2374 2375 2356 2389 C5' U A 76 OK OK 2388 2405 2406 2390 2419 C5' U A 77 OK OK 2418 2435 2436 2420 2449 C5' G A 78 OK OK 2448 2468 2469 2450 2483 C5' A A 79 OK OK 2482 2501 2502 2484 2516 C5' U A 80 OK OK 2515 2532 2533 2517 2546 C5' U A 81 OK OK 2545 2562 2563 2547 2576 C5' G A 82 OK OK 2575 2595 2596 2577 2610 C5' G A 83 OK OK 2609 2629 2630 2611 2644 C5' U A 84 OK OK 2643 2660 2661 2645 2674 C5' U A 85 OK OK 2673 2690 2691 2675 2704 C5' G A 86 OK OK 2703 2723 2724 2705 2738 C5' U A 87 OK OK 2737 2754 2755 2739 2768 C5' C A 88 OK OK 2767 2784 2785 2769 2799 C5' A A 89 OK OK 2798 2817 2818 2800 2832 C5' A A 90 OK OK 2831 2850 2851 2833 2865 C5' U A 91 OK OK 2864 2881 2882 2866 2895 C5' C A 92 OK OK 2894 2911 2912 2896 2926 C5' A A 93 OK OK 2925 2944 2945 2927 2959 C5' U A 94 OK OK 2958 2975 2976 2960 2989 C5' G A 95 OK OK 2988 3008 3009 2990 3023 C5' G A 96 OK OK 3022 3042 3043 3024 3057 C5' C A 97 OK OK 3056 3073 3074 3058 3088 C5' A A 98 OK OK 3087 3106 3107 3089 3121 C5' A A 99 OK OK 3120 3139 3140 3122 3154 C5' A A 100 OK OK 3153 3172 3173 3155 3187 C5' A A 101 OK OK 3186 3205 3206 3188 3220 C5' G A 102 OK OK 3219 3239 3240 3221 3254 C5' U A 103 OK OK 3253 3270 3271 3255 3284 C5' G A 104 OK OK 3283 3303 3304 3285 3318 C5' C A 105 OK OK 3317 3334 3335 3319 3349 C5' A A 106 OK OK 3348 3367 3368 3350 3382 C5' C A 107 OK OK 3381 3398 3399 3383 3413 C5' G A 108 OK OK 3412 3432 3433 3414 3447 C5' C A 109 OK OK 3446 3463 3464 3448 3478 C5' U A 110 OK OK 3477 3494 3495 3479 3508 C5' A A 111 OK OK 3507 3526 3527 3509 3541 C5' C A 112 OK OK 3540 3557 3558 3542 3572 C5' U A 113 OK OK 3571 3588 3589 3573 3602 C5' U A 114 OK OK 3601 3618 3619 3603 3632 C5' U A 115 OK OK 3631 3648 3649 3633 3662 C5' G A 116 OK OK 3661 3681 3682 3663 3696 C5' A A 117 OK OK 3695 3714 3715 3697 3730 C5' U B 201 OK OK 3729 3746 3747 3731 3760 C5' C B 202 OK OK 3759 3776 3777 3761 3791 C5' A B 203 OK OK 3790 3809 3810 3792 3824 C5' A B 204 OK OK 3823 3842 3843 3825 3857 C5' U B 205 OK OK 3856 3873 3874 3858 3887 C5' G B 206 OK OK 3886 3906 3907 3888 3921 C5' G B 207 OK OK 3920 3940 3941 3922 3955 C5' U B 208 OK OK 3954 3971 3972 3956 3985 C5' A B 209 OK OK 3984 4003 4004 3986 4018 C5' C B 210 OK OK 4017 4034 4035 4019 4049 C5' G B 211 OK OK 4048 4068 4069 4050 4083 C5' G B 212 OK OK 4082 4102 4103 4084 4117 C5' U B 213 OK OK 4116 4133 4134 4118 4147 C5' A B 214 OK OK 4146 4165 4166 4148 4180 C5' C B 215 OK OK 4179 4196 4197 4181 4211 C5' U B 216 OK OK 4210 4227 4228 4212 4241 C5' U B 217 OK OK 4240 4257 4258 4242 4271 C5' C B 218 OK OK 4270 4287 4288 4272 4302 C5' C B 219 OK OK 4301 4318 4319 4303 4333 C5' A B 220 OK OK 4332 4351 4352 4334 4366 C5' U B 221 OK OK 4365 4382 4383 4367 4396 C5' U B 222 OK OK 4395 4412 4413 4397 4426 C5' G B 223 OK OK 4425 4445 4446 4427 4460 C5' U B 224 OK OK 4459 4476 4477 4461 4490 C5' C B 225 OK OK 4489 4506 4507 4491 4521 C5' A B 226 OK OK 4520 4539 4540 4522 4554 C5' U B 227 OK OK 4553 4570 4571 4555 4584 C5' G B 228 OK OK 4583 4603 4604 4585 4618 C5' U B 229 OK OK 4617 4634 4635 4619 4648 C5' G B 230 OK OK 4647 4667 4668 4649 4682 C5' U B 231 OK OK 4681 4698 4699 4683 4712 C5' A B 232 OK OK 4711 4730 4731 4713 4745 C5' U B 233 OK OK 4744 4761 4762 4746 4775 C5' G B 234 OK OK 4774 4794 4795 4776 4809 C5' U B 235 OK OK 4808 4825 4826 4810 4839 C5' U B 236 OK OK 4838 4855 4856 4840 4869 C5' G B 237 OK OK 4868 4888 4889 4870 4903 C5' G B 238 OK OK 4902 4922 4923 4904 4937 C5' G B 239 OK OK 4936 4956 4957 4938 4971 C5' G B 240 OK OK 4970 4990 4991 4972 5005 C5' A B 241 OK OK 5004 5023 5024 5006 5038 C5' U B 242 OK OK 5037 5054 5055 5039 5068 C5' U B 243 OK OK 5067 5084 5085 5069 5098 C5' A B 244 OK OK 5097 5116 5117 5099 5131 C5' A B 245 OK OK 5130 5149 5150 5132 5164 C5' A B 246 OK OK 5163 5182 5183 5165 5197 C5' C B 247 OK OK 5196 5213 5214 5198 5228 C5' C B 248 OK OK 5227 5244 5245 5229 5259 C5' C B 249 OK OK 5258 5275 5276 5260 5290 C5' U B 250 OK OK 5289 5306 5307 5291 5320 C5' G B 251 OK OK 5319 5339 5340 5321 5354 C5' A B 252 OK OK 5353 5372 5373 5355 5387 C5' U B 253 OK OK 5386 5403 5404 5388 5417 C5' U B 254 OK OK 5416 5433 5434 5418 5447 C5' G B 255 OK OK 5446 5466 5467 5448 5481 C5' A B 256 OK OK 5480 5499 5500 5482 5514 C5' G B 257 OK OK 5513 5533 5534 5515 5548 C5' U B 258 OK OK 5547 5564 5565 5549 5578 C5' U B 259 OK OK 5577 5594 5595 5579 5608 C5' C B 260 OK OK 5607 5624 5625 5609 5639 C5' A B 261 OK OK 5638 5657 5658 5640 5672 C5' G B 262 OK OK 5671 5691 5692 5673 5706 C5' C B 263 OK OK 5705 5722 5723 5707 5737 C5' C B 264 OK OK 5736 5753 5754 5738 5768 C5' C B 265 OK OK 5767 5784 5785 5769 5799 C5' A B 266 OK OK 5798 5817 5818 5800 5832 C5' C B 267 OK OK 5831 5848 5849 5833 5863 C5' A B 268 OK OK 5862 5881 5882 5864 5896 C5' U B 269 OK OK 5895 5912 5913 5897 5926 C5' A B 270 OK OK 5925 5944 5945 5927 5959 C5' C B 271 OK OK 5958 5975 5976 5960 5990 C5' U B 272 OK OK 5989 6006 6007 5991 6020 C5' U B 273 OK OK 6019 6036 6037 6021 6050 C5' U B 274 OK OK 6049 6066 6067 6051 6080 C5' G B 275 OK OK 6079 6099 6100 6081 6114 C5' U B 276 OK OK 6113 6130 6131 6115 6144 C5' U B 277 OK OK 6143 6160 6161 6145 6174 C5' G B 278 OK OK 6173 6193 6194 6175 6208 C5' A B 279 OK OK 6207 6226 6227 6209 6241 C5' U B 280 OK OK 6240 6257 6258 6242 6271 C5' U B 281 OK OK 6270 6287 6288 6272 6301 C5' G B 282 OK OK 6300 6320 6321 6302 6335 C5' G B 283 OK OK 6334 6354 6355 6336 6369 C5' U B 284 OK OK 6368 6385 6386 6370 6399 C5' U B 285 OK OK 6398 6415 6416 6400 6429 C5' G B 286 OK OK 6428 6448 6449 6430 6463 C5' U B 287 OK OK 6462 6479 6480 6464 6493 C5' C B 288 OK OK 6492 6509 6510 6494 6524 C5' A B 289 OK OK 6523 6542 6543 6525 6557 C5' A B 290 OK OK 6556 6575 6576 6558 6590 C5' U B 291 OK OK 6589 6606 6607 6591 6620 C5' C B 292 OK OK 6619 6636 6637 6621 6651 C5' A B 293 OK OK 6650 6669 6670 6652 6684 C5' U B 294 OK OK 6683 6700 6701 6685 6714 C5' G B 295 OK OK 6713 6733 6734 6715 6748 C5' G B 296 OK OK 6747 6767 6768 6749 6782 C5' C B 297 OK OK 6781 6798 6799 6783 6813 C5' A B 298 OK OK 6812 6831 6832 6814 6846 C5' A B 299 OK OK 6845 6864 6865 6847 6879 C5' A B 300 OK OK 6878 6897 6898 6880 6912 C5' A B 301 OK OK 6911 6930 6931 6913 6945 C5' G B 302 OK OK 6944 6964 6965 6946 6979 C5' U B 303 OK OK 6978 6995 6996 6980 7009 C5' G B 304 OK OK 7008 7028 7029 7010 7043 C5' C B 305 OK OK 7042 7059 7060 7044 7074 C5' A B 306 OK OK 7073 7092 7093 7075 7107 C5' C B 307 OK OK 7106 7123 7124 7108 7138 C5' G B 308 OK OK 7137 7157 7158 7139 7172 C5' C B 309 OK OK 7171 7188 7189 7173 7203 C5' U B 310 OK OK 7202 7219 7220 7204 7233 C5' A B 311 OK OK 7232 7251 7252 7234 7266 C5' C B 312 OK OK 7265 7282 7283 7267 7297 C5' U B 313 OK OK 7296 7313 7314 7298 7327 C5' U B 314 OK OK 7326 7343 7344 7328 7357 C5' U B 315 OK OK 7356 7373 7374 7358 7387 C5' G B 316 OK OK 7386 7406 7407 7388 7421 C5' A B 317 OK OK 7420 7439 7440 7422 --------------------------------------------------------------------------------- --------------------------------------------------------------------------------- Seq No Atom Residue O1P O2P O3' O1P O2P O5' --------------------------------------------------------------------------------- 1 P U A 1 distorted distorted 2 3 4 31 P C A 2 distorted distorted 9 32 33 34 62 P A A 3 distorted distorted 39 63 64 65 95 P A A 4 distorted distorted 70 96 97 98 128 P U A 5 distorted distorted 103 129 130 131 158 P G A 6 distorted distorted 136 159 160 161 192 P G A 7 distorted distorted 166 193 194 195 226 P U A 8 distorted distorted 200 227 228 229 256 P A A 9 distorted distorted 234 257 258 259 289 P C A 10 distorted distorted 264 290 291 292 320 P G A 11 distorted distorted 297 321 322 323 354 P G A 12 distorted distorted 328 355 356 357 388 P U A 13 distorted distorted 362 389 390 391 418 P A A 14 distorted distorted 396 419 420 421 451 P C A 15 distorted distorted 426 452 453 454 482 P U A 16 distorted distorted 459 483 484 485 512 P U A 17 distorted distorted 490 513 514 515 542 P C A 18 distorted distorted 520 543 544 545 573 P C A 19 distorted distorted 550 574 575 576 604 P A A 20 distorted distorted 581 605 606 607 637 P U A 21 distorted distorted 612 638 639 640 667 P U A 22 distorted distorted 645 668 669 670 697 P G A 23 distorted distorted 675 698 699 700 731 P U A 24 distorted distorted 705 732 733 734 761 P C A 25 distorted distorted 739 762 763 764 792 P A A 26 distorted distorted 769 793 794 795 825 P U A 27 distorted distorted 800 826 827 828 855 P G A 28 distorted distorted 833 856 857 858 889 P U A 29 distorted distorted 863 890 891 892 919 P G A 30 distorted distorted 897 920 921 922 953 P U A 31 distorted distorted 927 954 955 956 983 P A A 32 distorted distorted 961 984 985 986 1016 P U A 33 distorted distorted 991 1017 1018 1019 1046 P G A 34 distorted distorted 1024 1047 1048 1049 1080 P U A 35 distorted distorted 1054 1081 1082 1083 1110 P U A 36 distorted distorted 1088 1111 1112 1113 1140 P G A 37 distorted distorted 1118 1141 1142 1143 1174 P G A 38 distorted distorted 1148 1175 1176 1177 1208 P G A 39 distorted distorted 1182 1209 1210 1211 1242 P G A 40 distorted distorted 1216 1243 1244 1245 1276 P A A 41 distorted distorted 1250 1277 1278 1279 1309 P U A 42 distorted distorted 1284 1310 1311 1312 1339 P U A 43 distorted distorted 1317 1340 1341 1342 1369 P A A 44 distorted distorted 1347 1370 1371 1372 1402 P A A 45 distorted distorted 1377 1403 1404 1405 1435 P A A 46 distorted distorted 1410 1436 1437 1438 1468 P C A 47 distorted distorted 1443 1469 1470 1471 1499 P C A 48 distorted distorted 1476 1500 1501 1502 1530 P C A 49 distorted distorted 1507 1531 1532 1533 1561 P U A 50 distorted distorted 1538 1562 1563 1564 1591 P G A 51 distorted distorted 1569 1592 1593 1594 1625 P A A 52 distorted distorted 1599 1626 1627 1628 1658 P U A 53 distorted distorted 1633 1659 1660 1661 1688 P U A 54 distorted distorted 1666 1689 1690 1691 1718 P G A 55 distorted distorted 1696 1719 1720 1721 1752 P A A 56 distorted distorted 1726 1753 1754 1755 1785 P G A 57 distorted distorted 1760 1786 1787 1788 1819 P U A 58 distorted distorted 1793 1820 1821 1822 1849 P U A 59 distorted distorted 1827 1850 1851 1852 1879 P C A 60 distorted distorted 1857 1880 1881 1882 1910 P A A 61 distorted distorted 1887 1911 1912 1913 1943 P G A 62 distorted distorted 1918 1944 1945 1946 1977 P C A 63 distorted distorted 1951 1978 1979 1980 2008 P C A 64 distorted distorted 1985 2009 2010 2011 2039 P C A 65 distorted distorted 2016 2040 2041 2042 2070 P A A 66 distorted distorted 2047 2071 2072 2073 2103 P C A 67 distorted distorted 2078 2104 2105 2106 2134 P A A 68 distorted distorted 2111 2135 2136 2137 2167 P U A 69 distorted distorted 2142 2168 2169 2170 2197 P A A 70 distorted distorted 2175 2198 2199 2200 2230 P C A 71 distorted distorted 2205 2231 2232 2233 2261 P U A 72 distorted distorted 2238 2262 2263 2264 2291 P U A 73 distorted distorted 2269 2292 2293 2294 2321 P U A 74 distorted distorted 2299 2322 2323 2324 2351 P G A 75 distorted distorted 2329 2352 2353 2354 2385 P U A 76 distorted distorted 2359 2386 2387 2388 2415 P U A 77 distorted distorted 2393 2416 2417 2418 2445 P G A 78 distorted distorted 2423 2446 2447 2448 2479 P A A 79 distorted distorted 2453 2480 2481 2482 2512 P U A 80 distorted distorted 2487 2513 2514 2515 2542 P U A 81 distorted distorted 2520 2543 2544 2545 2572 P G A 82 distorted distorted 2550 2573 2574 2575 2606 P G A 83 distorted distorted 2580 2607 2608 2609 2640 P U A 84 distorted distorted 2614 2641 2642 2643 2670 P U A 85 distorted distorted 2648 2671 2672 2673 2700 P G A 86 distorted distorted 2678 2701 2702 2703 2734 P U A 87 distorted distorted 2708 2735 2736 2737 2764 P C A 88 distorted distorted 2742 2765 2766 2767 2795 P A A 89 distorted distorted 2772 2796 2797 2798 2828 P A A 90 distorted distorted 2803 2829 2830 2831 2861 P U A 91 distorted distorted 2836 2862 2863 2864 2891 P C A 92 distorted distorted 2869 2892 2893 2894 2922 P A A 93 distorted distorted 2899 2923 2924 2925 2955 P U A 94 distorted distorted 2930 2956 2957 2958 2985 P G A 95 distorted distorted 2963 2986 2987 2988 3019 P G A 96 distorted distorted 2993 3020 3021 3022 3053 P C A 97 distorted distorted 3027 3054 3055 3056 3084 P A A 98 distorted distorted 3061 3085 3086 3087 3117 P A A 99 distorted distorted 3092 3118 3119 3120 3150 P A A 100 distorted distorted 3125 3151 3152 3153 3183 P A A 101 distorted distorted 3158 3184 3185 3186 3216 P G A 102 distorted distorted 3191 3217 3218 3219 3250 P U A 103 distorted distorted 3224 3251 3252 3253 3280 P G A 104 distorted distorted 3258 3281 3282 3283 3314 P C A 105 distorted distorted 3288 3315 3316 3317 3345 P A A 106 distorted distorted 3322 3346 3347 3348 3378 P C A 107 distorted distorted 3353 3379 3380 3381 3409 P G A 108 distorted distorted 3386 3410 3411 3412 3443 P C A 109 distorted distorted 3417 3444 3445 3446 3474 P U A 110 distorted distorted 3451 3475 3476 3477 3504 P A A 111 distorted distorted 3482 3505 3506 3507 3537 P C A 112 distorted distorted 3512 3538 3539 3540 3568 P U A 113 distorted distorted 3545 3569 3570 3571 3598 P U A 114 distorted distorted 3576 3599 3600 3601 3628 P U A 115 distorted distorted 3606 3629 3630 3631 3658 P G A 116 distorted distorted 3636 3659 3660 3661 3692 P A A 117 distorted distorted 3666 3693 3694 3695 3726 P U B 201 distorted distorted 3727 3728 3729 3756 P C B 202 distorted distorted 3734 3757 3758 3759 3787 P A B 203 distorted distorted 3764 3788 3789 3790 3820 P A B 204 distorted distorted 3795 3821 3822 3823 3853 P U B 205 distorted distorted 3828 3854 3855 3856 3883 P G B 206 distorted distorted 3861 3884 3885 3886 3917 P G B 207 distorted distorted 3891 3918 3919 3920 3951 P U B 208 distorted distorted 3925 3952 3953 3954 3981 P A B 209 distorted distorted 3959 3982 3983 3984 4014 P C B 210 distorted distorted 3989 4015 4016 4017 4045 P G B 211 distorted distorted 4022 4046 4047 4048 4079 P G B 212 distorted distorted 4053 4080 4081 4082 4113 P U B 213 distorted distorted 4087 4114 4115 4116 4143 P A B 214 distorted distorted 4121 4144 4145 4146 4176 P C B 215 distorted distorted 4151 4177 4178 4179 4207 P U B 216 distorted distorted 4184 4208 4209 4210 4237 P U B 217 distorted distorted 4215 4238 4239 4240 4267 P C B 218 distorted distorted 4245 4268 4269 4270 4298 P C B 219 distorted distorted 4275 4299 4300 4301 4329 P A B 220 distorted distorted 4306 4330 4331 4332 4362 P U B 221 distorted distorted 4337 4363 4364 4365 4392 P U B 222 distorted distorted 4370 4393 4394 4395 4422 P G B 223 distorted distorted 4400 4423 4424 4425 4456 P U B 224 distorted distorted 4430 4457 4458 4459 4486 P C B 225 distorted distorted 4464 4487 4488 4489 4517 P A B 226 distorted distorted 4494 4518 4519 4520 4550 P U B 227 distorted distorted 4525 4551 4552 4553 4580 P G B 228 distorted distorted 4558 4581 4582 4583 4614 P U B 229 distorted distorted 4588 4615 4616 4617 4644 P G B 230 distorted distorted 4622 4645 4646 4647 4678 P U B 231 distorted distorted 4652 4679 4680 4681 4708 P A B 232 distorted distorted 4686 4709 4710 4711 4741 P U B 233 distorted distorted 4716 4742 4743 4744 4771 P G B 234 distorted distorted 4749 4772 4773 4774 4805 P U B 235 distorted distorted 4779 4806 4807 4808 4835 P U B 236 distorted distorted 4813 4836 4837 4838 4865 P G B 237 distorted distorted 4843 4866 4867 4868 4899 P G B 238 distorted distorted 4873 4900 4901 4902 4933 P G B 239 distorted distorted 4907 4934 4935 4936 4967 P G B 240 distorted distorted 4941 4968 4969 4970 5001 P A B 241 distorted distorted 4975 5002 5003 5004 5034 P U B 242 distorted distorted 5009 5035 5036 5037 5064 P U B 243 distorted distorted 5042 5065 5066 5067 5094 P A B 244 distorted distorted 5072 5095 5096 5097 5127 P A B 245 distorted distorted 5102 5128 5129 5130 5160 P A B 246 distorted distorted 5135 5161 5162 5163 5193 P C B 247 distorted distorted 5168 5194 5195 5196 5224 P C B 248 distorted distorted 5201 5225 5226 5227 5255 P C B 249 distorted distorted 5232 5256 5257 5258 5286 P U B 250 distorted distorted 5263 5287 5288 5289 5316 P G B 251 distorted distorted 5294 5317 5318 5319 5350 P A B 252 distorted distorted 5324 5351 5352 5353 5383 P U B 253 distorted distorted 5358 5384 5385 5386 5413 P U B 254 distorted distorted 5391 5414 5415 5416 5443 P G B 255 distorted distorted 5421 5444 5445 5446 5477 P A B 256 distorted distorted 5451 5478 5479 5480 5510 P G B 257 distorted distorted 5485 5511 5512 5513 5544 P U B 258 distorted distorted 5518 5545 5546 5547 5574 P U B 259 distorted distorted 5552 5575 5576 5577 5604 P C B 260 distorted distorted 5582 5605 5606 5607 5635 P A B 261 distorted distorted 5612 5636 5637 5638 5668 P G B 262 distorted distorted 5643 5669 5670 5671 5702 P C B 263 distorted distorted 5676 5703 5704 5705 5733 P C B 264 distorted distorted 5710 5734 5735 5736 5764 P C B 265 distorted distorted 5741 5765 5766 5767 5795 P A B 266 distorted distorted 5772 5796 5797 5798 5828 P C B 267 distorted distorted 5803 5829 5830 5831 5859 P A B 268 distorted distorted 5836 5860 5861 5862 5892 P U B 269 distorted distorted 5867 5893 5894 5895 5922 P A B 270 distorted distorted 5900 5923 5924 5925 5955 P C B 271 distorted distorted 5930 5956 5957 5958 5986 P U B 272 distorted distorted 5963 5987 5988 5989 6016 P U B 273 distorted distorted 5994 6017 6018 6019 6046 P U B 274 distorted distorted 6024 6047 6048 6049 6076 P G B 275 distorted distorted 6054 6077 6078 6079 6110 P U B 276 distorted distorted 6084 6111 6112 6113 6140 P U B 277 distorted distorted 6118 6141 6142 6143 6170 P G B 278 distorted distorted 6148 6171 6172 6173 6204 P A B 279 distorted distorted 6178 6205 6206 6207 6237 P U B 280 distorted distorted 6212 6238 6239 6240 6267 P U B 281 distorted distorted 6245 6268 6269 6270 6297 P G B 282 distorted distorted 6275 6298 6299 6300 6331 P G B 283 distorted distorted 6305 6332 6333 6334 6365 P U B 284 distorted distorted 6339 6366 6367 6368 6395 P U B 285 distorted distorted 6373 6396 6397 6398 6425 P G B 286 distorted distorted 6403 6426 6427 6428 6459 P U B 287 distorted distorted 6433 6460 6461 6462 6489 P C B 288 distorted distorted 6467 6490 6491 6492 6520 P A B 289 distorted distorted 6497 6521 6522 6523 6553 P A B 290 distorted distorted 6528 6554 6555 6556 6586 P U B 291 distorted distorted 6561 6587 6588 6589 6616 P C B 292 distorted distorted 6594 6617 6618 6619 6647 P A B 293 distorted distorted 6624 6648 6649 6650 6680 P U B 294 distorted distorted 6655 6681 6682 6683 6710 P G B 295 distorted distorted 6688 6711 6712 6713 6744 P G B 296 distorted distorted 6718 6745 6746 6747 6778 P C B 297 distorted distorted 6752 6779 6780 6781 6809 P A B 298 distorted distorted 6786 6810 6811 6812 6842 P A B 299 distorted distorted 6817 6843 6844 6845 6875 P A B 300 distorted distorted 6850 6876 6877 6878 6908 P A B 301 distorted distorted 6883 6909 6910 6911 6941 P G B 302 distorted distorted 6916 6942 6943 6944 6975 P U B 303 distorted distorted 6949 6976 6977 6978 7005 P G B 304 distorted distorted 6983 7006 7007 7008 7039 P C B 305 distorted distorted 7013 7040 7041 7042 7070 P A B 306 distorted distorted 7047 7071 7072 7073 7103 P C B 307 distorted distorted 7078 7104 7105 7106 7134 P G B 308 distorted distorted 7111 7135 7136 7137 7168 P C B 309 distorted distorted 7142 7169 7170 7171 7199 P U B 310 distorted distorted 7176 7200 7201 7202 7229 P A B 311 distorted distorted 7207 7230 7231 7232 7262 P C B 312 distorted distorted 7237 7263 7264 7265 7293 P U B 313 distorted distorted 7270 7294 7295 7296 7323 P U B 314 distorted distorted 7301 7324 7325 7326 7353 P U B 315 distorted distorted 7331 7354 7355 7356 7383 P G B 316 distorted distorted 7361 7384 7385 7386 7417 P A B 317 distorted distorted 7391 7418 7419 7420 ---------------------------------------------------------------------------------