HEADER LIGASE/LIGASE INHIBITOR 26-JAN-17 5UM6 TITLE CRYSTAL STRUCTURE OF S. POMBE UBA1 IN A CLOSED CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN-ACTIVATING ENZYME E1 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POLY(A)+ RNA TRANSPORT PROTEIN 3; COMPND 5 EC: 6.2.1.45; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE (STRAIN 972 / ATCC SOURCE 3 24843); SOURCE 4 ORGANISM_COMMON: FISSION YEAST; SOURCE 5 ORGANISM_TAXID: 284812; SOURCE 6 STRAIN: 972 / ATCC 24843; SOURCE 7 GENE: PTR3, SPBC1604.21C, SPBC211.09; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) CODON PLUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PSMT3 KEYWDS ROSSMANN-LIKE FOLD, UBIQUITIN-LIKE FOLD, UBIQUITIN ACTIVATING ENZYME, KEYWDS 2 ATP BINDING, LIGASE ACTIVITY, ATP/MG BINDING, UBIQUITIN E2 BINDING, KEYWDS 3 LIGASE, TRANSFERASE, LIGASE-LIGASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Z.LV,L.YUAN,G.ALDANA-MASANGKAY,J.H.ATKISON,Y.CHEN,S.K.OLSEN REVDAT 3 01-JAN-20 5UM6 1 REMARK REVDAT 2 02-AUG-17 5UM6 1 JRNL REVDAT 1 14-JUN-17 5UM6 0 JRNL AUTH Z.LV,L.YUAN,J.H.ATKISON,G.ALDANA-MASANGKAY,Y.CHEN,S.K.OLSEN JRNL TITL DOMAIN ALTERNATION AND ACTIVE SITE REMODELING ARE CONSERVED JRNL TITL 2 STRUCTURAL FEATURES OF UBIQUITIN E1. JRNL REF J. BIOL. CHEM. V. 292 12089 2017 JRNL REFN ESSN 1083-351X JRNL PMID 28572513 JRNL DOI 10.1074/JBC.M117.787622 REMARK 2 REMARK 2 RESOLUTION. 2.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 25461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1292 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.2482 - 5.8067 1.00 2798 140 0.1852 0.2069 REMARK 3 2 5.8067 - 4.6111 1.00 2744 152 0.1783 0.2107 REMARK 3 3 4.6111 - 4.0288 1.00 2656 143 0.1687 0.2172 REMARK 3 4 4.0288 - 3.6607 1.00 2685 158 0.1927 0.2260 REMARK 3 5 3.6607 - 3.3985 1.00 2656 152 0.2151 0.2544 REMARK 3 6 3.3985 - 3.1982 1.00 2692 132 0.2357 0.2669 REMARK 3 7 3.1982 - 3.0381 1.00 2630 153 0.2518 0.2910 REMARK 3 8 3.0381 - 2.9059 1.00 2657 149 0.2757 0.3174 REMARK 3 9 2.9059 - 2.7940 0.99 2651 113 0.2741 0.2904 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7760 REMARK 3 ANGLE : 0.508 10494 REMARK 3 CHIRALITY : 0.040 1167 REMARK 3 PLANARITY : 0.004 1359 REMARK 3 DIHEDRAL : 15.377 4706 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND ((RESSEQ 39:172) OR (RESSEQ 261:580) REMARK 3 OR (RESSEQ 852:899)) REMARK 3 ORIGIN FOR THE GROUP (A): 145.6818 173.1186 264.2506 REMARK 3 T TENSOR REMARK 3 T11: -0.0856 T22: 0.5010 REMARK 3 T33: 0.2912 T12: 0.0298 REMARK 3 T13: 0.0183 T23: -0.2050 REMARK 3 L TENSOR REMARK 3 L11: 1.4298 L22: 0.3358 REMARK 3 L33: 0.6558 L12: -0.1116 REMARK 3 L13: 0.2046 L23: 0.0023 REMARK 3 S TENSOR REMARK 3 S11: 0.1700 S12: 0.4433 S13: -0.2619 REMARK 3 S21: -0.0261 S22: 0.1313 S23: -0.1954 REMARK 3 S31: 0.2412 S32: 0.4862 S33: -0.0014 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND ((RESSEQ 918:1012)) REMARK 3 ORIGIN FOR THE GROUP (A): 119.2938 210.1948 244.7353 REMARK 3 T TENSOR REMARK 3 T11: 0.5009 T22: 0.3765 REMARK 3 T33: 0.1353 T12: -0.2022 REMARK 3 T13: -0.0652 T23: 0.0198 REMARK 3 L TENSOR REMARK 3 L11: 1.5424 L22: 3.2962 REMARK 3 L33: 2.4926 L12: -0.7198 REMARK 3 L13: 0.1729 L23: -0.4603 REMARK 3 S TENSOR REMARK 3 S11: -0.0429 S12: -0.0986 S13: 0.2634 REMARK 3 S21: -0.1738 S22: -0.0465 S23: -0.1341 REMARK 3 S31: -0.6976 S32: 0.3421 S33: 0.0433 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND ((RESSEQ 173:260)) REMARK 3 ORIGIN FOR THE GROUP (A): 134.2829 186.0670 303.1516 REMARK 3 T TENSOR REMARK 3 T11: 0.7008 T22: 0.7074 REMARK 3 T33: 0.5505 T12: 0.0569 REMARK 3 T13: 0.0177 T23: -0.1262 REMARK 3 L TENSOR REMARK 3 L11: 3.5597 L22: 4.3976 REMARK 3 L33: 2.8340 L12: -1.8529 REMARK 3 L13: -1.7293 L23: 3.5102 REMARK 3 S TENSOR REMARK 3 S11: -0.1679 S12: -0.1932 S13: -0.1448 REMARK 3 S21: 0.0796 S22: -0.2347 S23: 0.4401 REMARK 3 S31: -0.0852 S32: -0.3895 S33: 0.2176 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UM6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000226096. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 108 REMARK 200 PH : 5.6-6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.08 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 V705B REMARK 200 DATA SCALING SOFTWARE : HKL-2000 V705B REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25520 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.794 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.30 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.05100 REMARK 200 FOR THE DATA SET : 39.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.50 REMARK 200 R MERGE FOR SHELL (I) : 0.72600 REMARK 200 R SYM FOR SHELL (I) : 0.67200 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4II3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE PH5.6-6.0 1.0-1.2 REMARK 280 AMMONIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 72.55100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.55100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 72.55100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.55100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 72.55100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 72.55100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 72.55100 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 72.55100 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 72.55100 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 72.55100 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 72.55100 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 72.55100 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 72.55100 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 72.55100 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 72.55100 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 72.55100 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 72.55100 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 72.55100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 13 REMARK 465 THR A 14 REMARK 465 ILE A 15 REMARK 465 ASP A 16 REMARK 465 GLU A 17 REMARK 465 GLY A 18 REMARK 465 LEU A 19 REMARK 465 TYR A 20 REMARK 465 SER A 21 REMARK 465 ARG A 22 REMARK 465 GLN A 23 REMARK 465 LEU A 24 REMARK 465 TYR A 25 REMARK 465 VAL A 26 REMARK 465 LEU A 27 REMARK 465 GLY A 28 REMARK 465 HIS A 29 REMARK 465 GLU A 30 REMARK 465 ALA A 31 REMARK 465 MET A 32 REMARK 465 LYS A 33 REMARK 465 GLN A 34 REMARK 465 MET A 35 REMARK 465 SER A 36 REMARK 465 ASN A 770 REMARK 465 GLU A 771 REMARK 465 ASN A 772 REMARK 465 GLU A 773 REMARK 465 GLU A 774 REMARK 465 ALA A 775 REMARK 465 PRO A 776 REMARK 465 GLU A 777 REMARK 465 THR A 778 REMARK 465 ALA A 779 REMARK 465 ALA A 780 REMARK 465 ASN A 781 REMARK 465 LYS A 782 REMARK 465 ASP A 783 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 38 71.48 -100.21 REMARK 500 LYS A 46 -154.95 -86.72 REMARK 500 ASP A 68 88.41 -164.12 REMARK 500 SER A 79 -6.23 -148.22 REMARK 500 ASP A 174 102.79 -160.93 REMARK 500 LEU A 197 -154.34 -80.69 REMARK 500 THR A 200 67.25 29.80 REMARK 500 ASN A 222 32.11 -99.97 REMARK 500 ASN A 251 -162.59 56.82 REMARK 500 HIS A 305 48.21 -143.03 REMARK 500 GLN A 333 47.66 34.88 REMARK 500 ARG A 351 30.79 -93.72 REMARK 500 VAL A 416 -53.34 -120.87 REMARK 500 GLU A 516 -122.13 22.81 REMARK 500 ILE A 520 56.92 -99.10 REMARK 500 LEU A 575 -64.53 -157.12 REMARK 500 SER A 581 -158.26 59.55 REMARK 500 ASN A 597 -38.43 -131.05 REMARK 500 LYS A 618 -74.50 -131.02 REMARK 500 VAL A 656 -52.82 -138.59 REMARK 500 ASN A 679 -63.69 -142.82 REMARK 500 ILE A 977 -74.29 -69.95 REMARK 500 PHE A 985 35.07 -96.38 REMARK 500 ASP A 997 -158.74 -86.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8EA A 1102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8E7 A 1103 DBREF 5UM6 A 13 1012 UNP O94609 UBA1_SCHPO 13 1012 SEQADV 5UM6 ALA A 593 UNP O94609 CYS 593 ENGINEERED MUTATION SEQRES 1 A 1000 ASN THR ILE ASP GLU GLY LEU TYR SER ARG GLN LEU TYR SEQRES 2 A 1000 VAL LEU GLY HIS GLU ALA MET LYS GLN MET SER GLN SER SEQRES 3 A 1000 ASN VAL LEU ILE ILE GLY CYS LYS GLY LEU GLY VAL GLU SEQRES 4 A 1000 ILE ALA LYS ASN VAL CYS LEU ALA GLY VAL LYS SER VAL SEQRES 5 A 1000 THR LEU TYR ASP PRO GLN PRO THR ARG ILE GLU ASP LEU SEQRES 6 A 1000 SER SER GLN TYR PHE LEU THR GLU ASP ASP ILE GLY VAL SEQRES 7 A 1000 PRO ARG ALA LYS VAL THR VAL SER LYS LEU ALA GLU LEU SEQRES 8 A 1000 ASN GLN TYR VAL PRO VAL SER VAL VAL ASP GLU LEU SER SEQRES 9 A 1000 THR GLU TYR LEU LYS ASN PHE LYS CYS VAL VAL VAL THR SEQRES 10 A 1000 GLU THR SER LEU THR LYS GLN LEU GLU ILE ASN ASP PHE SEQRES 11 A 1000 THR HIS LYS ASN HIS ILE ALA TYR ILE ALA ALA ASP SER SEQRES 12 A 1000 ARG GLY LEU PHE GLY SER ILE PHE CYS ASP PHE GLY GLU SEQRES 13 A 1000 ASN PHE ILE CYS THR ASP THR ASP GLY ASN GLU PRO LEU SEQRES 14 A 1000 THR GLY MET ILE ALA SER ILE THR ASP ASP GLY VAL VAL SEQRES 15 A 1000 THR MET LEU GLU GLU THR ARG HIS GLY LEU GLU ASN GLY SEQRES 16 A 1000 ASP PHE VAL LYS PHE THR GLU VAL LYS GLY MET PRO GLY SEQRES 17 A 1000 LEU ASN ASP GLY THR PRO ARG LYS VAL GLU VAL LYS GLY SEQRES 18 A 1000 PRO TYR THR PHE SER ILE GLY SER VAL LYS ASP LEU GLY SEQRES 19 A 1000 SER ALA GLY TYR ASN GLY VAL PHE THR GLN VAL LYS VAL SEQRES 20 A 1000 PRO THR LYS ILE SER PHE LYS SER LEU ARG GLU SER LEU SEQRES 21 A 1000 LYS ASP PRO GLU TYR VAL TYR PRO ASP PHE GLY LYS MET SEQRES 22 A 1000 MET ARG PRO PRO GLN TYR HIS ILE ALA PHE GLN ALA LEU SEQRES 23 A 1000 SER ALA PHE ALA ASP ALA HIS GLU GLY SER LEU PRO ARG SEQRES 24 A 1000 PRO ARG ASN ASP ILE ASP ALA ALA GLU PHE PHE GLU PHE SEQRES 25 A 1000 CYS LYS LYS ILE ALA SER THR LEU GLN PHE ASP VAL GLU SEQRES 26 A 1000 LEU ASP GLU LYS LEU ILE LYS GLU ILE SER TYR GLN ALA SEQRES 27 A 1000 ARG GLY ASP LEU VAL ALA MET SER ALA PHE LEU GLY GLY SEQRES 28 A 1000 ALA VAL ALA GLN GLU VAL LEU LYS ALA THR THR SER LYS SEQRES 29 A 1000 PHE TYR PRO LEU LYS GLN TYR PHE TYR PHE ASP SER LEU SEQRES 30 A 1000 GLU SER LEU PRO SER SER VAL THR ILE SER GLU GLU THR SEQRES 31 A 1000 CYS LYS PRO ARG GLY CYS ARG TYR ASP GLY GLN ILE ALA SEQRES 32 A 1000 VAL PHE GLY SER GLU PHE GLN GLU LYS ILE ALA SER LEU SEQRES 33 A 1000 SER THR PHE LEU VAL GLY ALA GLY ALA ILE GLY CYS GLU SEQRES 34 A 1000 MET LEU LYS ASN TRP ALA MET MET GLY VAL ALA THR GLY SEQRES 35 A 1000 GLU SER GLY HIS ILE SER VAL THR ASP MET ASP SER ILE SEQRES 36 A 1000 GLU LYS SER ASN LEU ASN ARG GLN PHE LEU PHE ARG PRO SEQRES 37 A 1000 ARG ASP VAL GLY LYS LEU LYS SER GLU CYS ALA SER THR SEQRES 38 A 1000 ALA VAL SER ILE MET ASN PRO SER LEU THR GLY LYS ILE SEQRES 39 A 1000 THR SER TYR GLN GLU ARG VAL GLY PRO GLU SER GLU GLY SEQRES 40 A 1000 ILE PHE GLY ASP GLU PHE PHE GLU LYS LEU SER LEU VAL SEQRES 41 A 1000 THR ASN ALA LEU ASP ASN VAL GLU ALA ARG MET TYR VAL SEQRES 42 A 1000 ASP ARG ARG CYS VAL PHE PHE GLU LYS PRO LEU LEU GLU SEQRES 43 A 1000 SER GLY THR LEU GLY THR LYS GLY ASN THR GLN VAL VAL SEQRES 44 A 1000 VAL PRO HIS LEU THR GLU SER TYR GLY SER SER GLN ASP SEQRES 45 A 1000 PRO PRO GLU LYS SER PHE PRO ILE ALA THR LEU LYS ASN SEQRES 46 A 1000 PHE PRO ASN ARG ILE GLU HIS THR ILE ALA TRP ALA ARG SEQRES 47 A 1000 ASP LEU PHE GLU GLY LEU PHE LYS GLN PRO ILE ASP ASN SEQRES 48 A 1000 VAL ASN MET TYR LEU SER SER PRO ASN PHE LEU GLU THR SEQRES 49 A 1000 SER LEU LYS THR SER SER ASN PRO ARG GLU VAL LEU GLU SEQRES 50 A 1000 ASN ILE ARG ASP TYR LEU VAL THR GLU LYS PRO LEU SER SEQRES 51 A 1000 PHE GLU GLU CYS ILE MET TRP ALA ARG LEU GLN PHE ASP SEQRES 52 A 1000 LYS PHE PHE ASN ASN ASN ILE GLN GLN LEU LEU PHE ASN SEQRES 53 A 1000 PHE PRO LYS ASP SER VAL THR SER THR GLY GLN PRO PHE SEQRES 54 A 1000 TRP SER GLY PRO LYS ARG ALA PRO THR PRO LEU SER PHE SEQRES 55 A 1000 ASP ILE HIS ASN ARG GLU HIS PHE ASP PHE ILE VAL ALA SEQRES 56 A 1000 ALA ALA SER LEU TYR ALA PHE ASN TYR GLY LEU LYS SER SEQRES 57 A 1000 GLU THR ASP PRO ALA ILE TYR GLU ARG VAL LEU ALA GLY SEQRES 58 A 1000 TYR ASN PRO PRO PRO PHE ALA PRO LYS SER GLY ILE LYS SEQRES 59 A 1000 ILE GLN VAL ASN GLU ASN GLU GLU ALA PRO GLU THR ALA SEQRES 60 A 1000 ALA ASN LYS ASP LYS GLN GLU LEU LYS SER ILE ALA ASP SEQRES 61 A 1000 SER LEU PRO PRO PRO SER SER LEU VAL GLY PHE ARG LEU SEQRES 62 A 1000 THR PRO ALA GLU PHE GLU LYS ASP ASP ASP SER ASN HIS SEQRES 63 A 1000 HIS ILE ASP PHE ILE THR ALA ALA SER ASN LEU ARG ALA SEQRES 64 A 1000 MET ASN TYR ASP ILE THR PRO ALA ASP ARG PHE LYS THR SEQRES 65 A 1000 LYS PHE VAL ALA GLY LYS ILE VAL PRO ALA MET CYS THR SEQRES 66 A 1000 SER THR ALA VAL VAL SER GLY LEU VAL CYS LEU GLU LEU SEQRES 67 A 1000 VAL LYS LEU VAL ASP GLY LYS LYS LYS ILE GLU GLU TYR SEQRES 68 A 1000 LYS ASN GLY PHE PHE ASN LEU ALA ILE GLY LEU PHE THR SEQRES 69 A 1000 PHE SER ASP PRO ILE ALA SER PRO LYS MET LYS VAL ASN SEQRES 70 A 1000 GLY LYS GLU ILE ASP LYS ILE TRP ASP ARG TYR ASN LEU SEQRES 71 A 1000 PRO ASP CYS THR LEU GLN GLU LEU ILE ASP TYR PHE GLN SEQRES 72 A 1000 LYS GLU GLU GLY LEU GLU VAL THR MET LEU SER SER GLY SEQRES 73 A 1000 VAL SER LEU LEU TYR ALA ASN PHE GLN PRO PRO LYS LYS SEQRES 74 A 1000 LEU ALA GLU ARG LEU PRO LEU LYS ILE SER GLU LEU VAL SEQRES 75 A 1000 GLU GLN ILE THR LYS LYS LYS LEU GLU PRO PHE ARG LYS SEQRES 76 A 1000 HIS LEU VAL LEU GLU ILE CYS CYS ASP ASP ALA ASN GLY SEQRES 77 A 1000 GLU ASP VAL GLU VAL PRO PHE ILE CYS ILE LYS LEU HET SO4 A1101 5 HET 8EA A1102 23 HET 8E7 A1103 14 HETNAM SO4 SULFATE ION HETNAM 8EA N-(2-{[(4-CHLOROPHENYL)METHYL]DISULFANYL}ETHYL)DECAN-1- HETNAM 2 8EA AMINE HETNAM 8E7 2-(DECYLAMINO)ETHANE-1-THIOL FORMUL 2 SO4 O4 S 2- FORMUL 3 8EA C19 H32 CL N S2 FORMUL 4 8E7 C12 H27 N S HELIX 1 AA1 LYS A 46 GLY A 60 1 15 HELIX 2 AA2 ILE A 74 SER A 79 5 6 HELIX 3 AA3 THR A 84 ILE A 88 5 5 HELIX 4 AA4 PRO A 91 GLU A 102 1 12 HELIX 5 AA5 THR A 117 PHE A 123 5 7 HELIX 6 AA6 SER A 132 ASN A 146 1 15 HELIX 7 AA7 MET A 218 ASP A 223 5 6 HELIX 8 AA8 SER A 267 LEU A 272 1 6 HELIX 9 AA9 ASP A 281 MET A 285 5 5 HELIX 10 AB1 ARG A 287 ALA A 304 1 18 HELIX 11 AB2 ASN A 314 LEU A 332 1 19 HELIX 12 AB3 ASP A 339 GLN A 349 1 11 HELIX 13 AB4 LEU A 354 SER A 375 1 22 HELIX 14 AB5 LEU A 389 LEU A 392 5 4 HELIX 15 AB6 TYR A 410 GLY A 418 1 9 HELIX 16 AB7 GLY A 418 SER A 427 1 10 HELIX 17 AB8 GLY A 436 GLY A 450 1 15 HELIX 18 AB9 ASN A 471 GLN A 475 5 5 HELIX 19 AC1 ARG A 479 VAL A 483 5 5 HELIX 20 AC2 LEU A 486 ASN A 499 1 14 HELIX 21 AC3 PRO A 500 THR A 503 5 4 HELIX 22 AC4 GLY A 522 LEU A 529 1 8 HELIX 23 AC5 ASN A 538 GLU A 553 1 16 HELIX 24 AC6 PRO A 591 ASN A 597 1 7 HELIX 25 AC7 ARG A 601 LYS A 618 1 18 HELIX 26 AC8 LYS A 618 LEU A 628 1 11 HELIX 27 AC9 ASN A 632 SER A 641 1 10 HELIX 28 AD1 ASN A 643 VAL A 656 1 14 HELIX 29 AD2 SER A 662 ASN A 679 1 18 HELIX 30 AD3 ASN A 679 PHE A 689 1 11 HELIX 31 AD4 ASN A 718 GLY A 737 1 20 HELIX 32 AD5 ASP A 743 GLY A 753 1 11 HELIX 33 AD6 GLN A 785 ASP A 792 1 8 HELIX 34 AD7 PRO A 796 VAL A 801 5 6 HELIX 35 AD8 HIS A 818 ASP A 835 1 18 HELIX 36 AD9 ASP A 840 LYS A 850 1 11 HELIX 37 AE1 MET A 855 ASP A 875 1 21 HELIX 38 AE2 LYS A 879 TYR A 883 5 5 HELIX 39 AE3 THR A 926 GLU A 937 1 12 HELIX 40 AE4 PRO A 958 ALA A 963 1 6 HELIX 41 AE5 LYS A 969 THR A 978 1 10 SHEET 1 AA1 7 VAL A 109 VAL A 111 0 SHEET 2 AA1 7 SER A 63 TYR A 67 1 N LEU A 66 O SER A 110 SHEET 3 AA1 7 ASN A 39 ILE A 43 1 N ILE A 42 O THR A 65 SHEET 4 AA1 7 CYS A 125 VAL A 128 1 O VAL A 127 N ILE A 43 SHEET 5 AA1 7 ALA A 149 ARG A 156 1 O ILE A 151 N VAL A 128 SHEET 6 AA1 7 PHE A 159 ASP A 165 -1 O ASP A 165 N TYR A 150 SHEET 7 AA1 7 TYR A 383 ASP A 387 -1 O PHE A 386 N GLY A 160 SHEET 1 AA2 2 PHE A 170 CYS A 172 0 SHEET 2 AA2 2 THR A 261 ILE A 263 -1 O ILE A 263 N PHE A 170 SHEET 1 AA3 6 ARG A 227 LYS A 228 0 SHEET 2 AA3 6 PHE A 209 THR A 213 -1 N VAL A 210 O ARG A 227 SHEET 3 AA3 6 VAL A 253 VAL A 257 -1 O VAL A 257 N PHE A 209 SHEET 4 AA3 6 THR A 182 THR A 189 -1 N GLY A 183 O PHE A 254 SHEET 5 AA3 6 VAL A 193 MET A 196 -1 O THR A 195 N ALA A 186 SHEET 6 AA3 6 THR A 236 SER A 238 -1 O PHE A 237 N VAL A 194 SHEET 1 AA4 5 ARG A 227 LYS A 228 0 SHEET 2 AA4 5 PHE A 209 THR A 213 -1 N VAL A 210 O ARG A 227 SHEET 3 AA4 5 VAL A 253 VAL A 257 -1 O VAL A 257 N PHE A 209 SHEET 4 AA4 5 THR A 182 THR A 189 -1 N GLY A 183 O PHE A 254 SHEET 5 AA4 5 ALA A 248 TYR A 250 -1 O GLY A 249 N ILE A 188 SHEET 1 AA5 8 ILE A 506 TYR A 509 0 SHEET 2 AA5 8 HIS A 458 THR A 462 1 N VAL A 461 O THR A 507 SHEET 3 AA5 8 SER A 429 VAL A 433 1 N LEU A 432 O SER A 460 SHEET 4 AA5 8 LEU A 531 ASN A 534 1 O THR A 533 N VAL A 433 SHEET 5 AA5 8 LEU A 556 LEU A 562 1 O LEU A 557 N ASN A 534 SHEET 6 AA5 8 LYS A 565 VAL A 571 -1 O GLN A 569 N GLU A 558 SHEET 7 AA5 8 ASN A 885 ASN A 889 -1 O PHE A 888 N GLY A 566 SHEET 8 AA5 8 LEU A 894 SER A 898 -1 O SER A 898 N ASN A 885 SHEET 1 AA6 2 LYS A 905 VAL A 908 0 SHEET 2 AA6 2 LYS A 911 ASP A 914 -1 O ILE A 913 N MET A 906 SHEET 1 AA7 5 TYR A 920 PRO A 923 0 SHEET 2 AA7 5 ILE A1008 LYS A1011 1 O CYS A1009 N TYR A 920 SHEET 3 AA7 5 HIS A 988 ASP A 996 -1 N LEU A 989 O ILE A1010 SHEET 4 AA7 5 GLU A 941 SER A 947 -1 N SER A 946 O GLU A 992 SHEET 5 AA7 5 SER A 950 ALA A 954 -1 O TYR A 953 N LEU A 945 SHEET 1 AA8 4 TYR A 920 PRO A 923 0 SHEET 2 AA8 4 ILE A1008 LYS A1011 1 O CYS A1009 N TYR A 920 SHEET 3 AA8 4 HIS A 988 ASP A 996 -1 N LEU A 989 O ILE A1010 SHEET 4 AA8 4 ASP A1002 VAL A1003 -1 O VAL A1003 N CYS A 995 LINK SG CYS A 994 S01 8E7 A1103 1555 1555 2.01 CISPEP 1 HIS A 202 GLY A 203 0 -1.14 CISPEP 2 LYS A 381 GLN A 382 0 -3.15 CISPEP 3 GLY A 519 ILE A 520 0 1.31 SITE 1 AC1 2 GLY A 436 ALA A 437 SITE 1 AC2 6 TYR A 67 LEU A 115 GLU A 130 LYS A 135 SITE 2 AC2 6 GLU A 138 GLY A 307 SITE 1 AC3 2 MET A 944 CYS A 994 CRYST1 145.102 145.102 145.102 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006892 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006892 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006892 0.00000 MASTER 374 0 3 41 39 0 4 6 0 0 0 77 END