HEADER TRANSCRIPTION 11-JAN-17 5UHI TITLE STRUCTURE OF RORGT BOUND TO COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR RECEPTOR ROR-GAMMA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 265-507; COMPND 5 SYNONYM: NUCLEAR RECEPTOR RZR-GAMMA,NUCLEAR RECEPTOR SUBFAMILY 1 COMPND 6 GROUP F MEMBER 3,RAR-RELATED ORPHAN RECEPTOR C,RETINOID-RELATED COMPND 7 ORPHAN RECEPTOR-GAMMA; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RORC, NR1F3, RORG, RZRG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEAR HORMONE RECEPTOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.SPURLINO,M.ABAD REVDAT 2 26-APR-17 5UHI 1 JRNL REVDAT 1 05-APR-17 5UHI 0 JRNL AUTH D.A.KUMMER,M.D.CUMMINGS,M.ABAD,J.BARBAY,G.CASTRO,R.WOLIN, JRNL AUTH 2 K.D.KREUTTER,U.MAHAROOF,C.MILLIGAN,R.NISHIMURA,J.PIERCE, JRNL AUTH 3 C.SCHALK-HIHI,J.SPURLINO,M.URBANSKI,H.VENKATESAN,A.WANG, JRNL AUTH 4 C.WOODS,X.XUE,J.P.EDWARDS,A.M.FOURIE,K.LEONARD JRNL TITL IDENTIFICATION AND STRUCTURE ACTIVITY RELATIONSHIPS OF JRNL TITL 2 QUINOLINE TERTIARY ALCOHOL MODULATORS OF ROR GAMMA T. JRNL REF BIOORG. MED. CHEM. LETT. V. 27 2047 2017 JRNL REFN ESSN 1464-3405 JRNL PMID 28318945 JRNL DOI 10.1016/J.BMCL.2017.02.044 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 10961 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.263 REMARK 3 R VALUE (WORKING SET) : 0.257 REMARK 3 FREE R VALUE : 0.318 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.8670 - 6.3882 1.00 1371 150 0.2110 0.2518 REMARK 3 2 6.3882 - 5.0738 0.99 1297 144 0.2545 0.3255 REMARK 3 3 5.0738 - 4.4334 0.99 1267 145 0.2025 0.2845 REMARK 3 4 4.4334 - 4.0285 0.99 1265 144 0.2331 0.2996 REMARK 3 5 4.0285 - 3.7399 0.98 1235 139 0.3012 0.3896 REMARK 3 6 3.7399 - 3.5196 0.94 1190 127 0.3531 0.4124 REMARK 3 7 3.5196 - 3.3434 0.90 1154 127 0.3848 0.4976 REMARK 3 8 3.3434 - 3.1979 0.87 1088 118 0.4299 0.4644 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.530 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 43.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3788 REMARK 3 ANGLE : 0.911 5103 REMARK 3 CHIRALITY : 0.048 548 REMARK 3 PLANARITY : 0.007 675 REMARK 3 DIHEDRAL : 13.271 2253 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 265 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.4212 -27.6089 15.9105 REMARK 3 T TENSOR REMARK 3 T11: 1.1296 T22: 1.1881 REMARK 3 T33: 1.2409 T12: 0.3357 REMARK 3 T13: 0.0970 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 1.1904 L22: 0.2547 REMARK 3 L33: 0.5656 L12: 0.1609 REMARK 3 L13: 0.1526 L23: -0.1819 REMARK 3 S TENSOR REMARK 3 S11: -0.0750 S12: 0.2022 S13: 0.0231 REMARK 3 S21: 1.4587 S22: -0.0172 S23: 0.1124 REMARK 3 S31: 1.1709 S32: -0.5872 S33: -0.0063 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 376 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.0526 -22.8557 19.6011 REMARK 3 T TENSOR REMARK 3 T11: 2.1143 T22: 1.1910 REMARK 3 T33: 1.2096 T12: -0.0511 REMARK 3 T13: 0.0624 T23: 0.0833 REMARK 3 L TENSOR REMARK 3 L11: 0.0219 L22: 0.5065 REMARK 3 L33: 0.4284 L12: -0.7827 REMARK 3 L13: 0.8999 L23: -0.6263 REMARK 3 S TENSOR REMARK 3 S11: 0.1842 S12: -0.0228 S13: -0.0416 REMARK 3 S21: 2.1271 S22: -0.3387 S23: -0.3321 REMARK 3 S31: -0.2556 S32: 0.9064 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 456 THROUGH 487 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.8952 -23.6219 16.9256 REMARK 3 T TENSOR REMARK 3 T11: 1.8120 T22: 1.8882 REMARK 3 T33: 1.8291 T12: -0.2184 REMARK 3 T13: -0.2433 T23: 0.3227 REMARK 3 L TENSOR REMARK 3 L11: 0.0106 L22: 0.0275 REMARK 3 L33: 0.0692 L12: -0.0462 REMARK 3 L13: -0.0408 L23: -0.0249 REMARK 3 S TENSOR REMARK 3 S11: -0.4515 S12: -0.4517 S13: -0.1656 REMARK 3 S21: 0.7013 S22: -0.7567 S23: -1.0185 REMARK 3 S31: -0.8640 S32: -0.1451 S33: -0.0026 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 265 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.2543 -29.0177 44.4064 REMARK 3 T TENSOR REMARK 3 T11: 1.6438 T22: 1.2925 REMARK 3 T33: 1.2449 T12: 0.2307 REMARK 3 T13: -0.1383 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.8469 L22: 1.0789 REMARK 3 L33: 1.4533 L12: 0.5169 REMARK 3 L13: 0.1328 L23: 0.7556 REMARK 3 S TENSOR REMARK 3 S11: 0.0224 S12: -0.0536 S13: 0.0836 REMARK 3 S21: -0.9418 S22: -0.1149 S23: 0.0552 REMARK 3 S31: -0.0805 S32: -0.4329 S33: 0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 456 THROUGH 487 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.4943 -33.0984 46.3983 REMARK 3 T TENSOR REMARK 3 T11: 0.6016 T22: 2.5909 REMARK 3 T33: 1.4163 T12: 0.5362 REMARK 3 T13: 0.3010 T23: -0.1710 REMARK 3 L TENSOR REMARK 3 L11: 0.7641 L22: 2.8473 REMARK 3 L33: 0.8918 L12: 1.2196 REMARK 3 L13: -0.6546 L23: -0.3919 REMARK 3 S TENSOR REMARK 3 S11: -0.7897 S12: -0.3224 S13: -0.6631 REMARK 3 S21: -1.5670 S22: 0.9825 S23: 0.7925 REMARK 3 S31: 0.1685 S32: -1.1582 S33: -0.3151 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UHI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000225837. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10961 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.198 REMARK 200 RESOLUTION RANGE LOW (A) : 39.864 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% 8K PEG, 100MM HEPES PH7.5, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.78850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.78850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 52.17500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.16150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 52.17500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.16150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 61.78850 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 52.17500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 52.16150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 61.78850 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 52.17500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 52.16150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 250 REMARK 465 HIS A 251 REMARK 465 HIS A 252 REMARK 465 HIS A 253 REMARK 465 HIS A 254 REMARK 465 HIS A 255 REMARK 465 HIS A 256 REMARK 465 GLY A 257 REMARK 465 GLU A 258 REMARK 465 ASN A 259 REMARK 465 LEU A 260 REMARK 465 TYR A 261 REMARK 465 PHE A 262 REMARK 465 GLN A 263 REMARK 465 GLY A 264 REMARK 465 HIS A 488 REMARK 465 LEU A 489 REMARK 465 HIS A 490 REMARK 465 PRO A 491 REMARK 465 ILE A 492 REMARK 465 VAL A 493 REMARK 465 VAL A 494 REMARK 465 GLN A 495 REMARK 465 ALA A 496 REMARK 465 ALA A 497 REMARK 465 PHE A 498 REMARK 465 PRO A 499 REMARK 465 PRO A 500 REMARK 465 LEU A 501 REMARK 465 TYR A 502 REMARK 465 LYS A 503 REMARK 465 GLU A 504 REMARK 465 LEU A 505 REMARK 465 PHE A 506 REMARK 465 SER A 507 REMARK 465 GLY B 250 REMARK 465 HIS B 251 REMARK 465 HIS B 252 REMARK 465 HIS B 253 REMARK 465 HIS B 254 REMARK 465 HIS B 255 REMARK 465 HIS B 256 REMARK 465 GLY B 257 REMARK 465 GLU B 258 REMARK 465 ASN B 259 REMARK 465 LEU B 260 REMARK 465 TYR B 261 REMARK 465 PHE B 262 REMARK 465 GLN B 263 REMARK 465 GLY B 264 REMARK 465 HIS B 488 REMARK 465 LEU B 489 REMARK 465 HIS B 490 REMARK 465 PRO B 491 REMARK 465 ILE B 492 REMARK 465 VAL B 493 REMARK 465 VAL B 494 REMARK 465 GLN B 495 REMARK 465 ALA B 496 REMARK 465 ALA B 497 REMARK 465 PHE B 498 REMARK 465 PRO B 499 REMARK 465 PRO B 500 REMARK 465 LEU B 501 REMARK 465 TYR B 502 REMARK 465 LYS B 503 REMARK 465 GLU B 504 REMARK 465 LEU B 505 REMARK 465 PHE B 506 REMARK 465 SER B 507 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 480 CG1 CG2 REMARK 470 GLN A 487 CG CD OE1 NE2 REMARK 470 VAL B 480 CG1 CG2 REMARK 470 GLU B 481 CG CD OE1 OE2 REMARK 470 GLN B 487 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 297 C - N - CA ANGL. DEV. = 15.6 DEGREES REMARK 500 LEU A 466 CA - CB - CG ANGL. DEV. = 17.6 DEGREES REMARK 500 LEU A 483 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 286 -40.55 78.82 REMARK 500 ARG A 288 99.85 43.05 REMARK 500 LEU A 289 -41.08 -14.88 REMARK 500 SER A 297 -20.67 110.61 REMARK 500 LEU A 425 -72.88 -61.82 REMARK 500 ILE A 426 79.67 -59.87 REMARK 500 HIS A 429 -93.06 -100.07 REMARK 500 ARG A 430 -177.17 57.26 REMARK 500 LEU A 433 89.47 58.49 REMARK 500 HIS A 458 73.86 47.68 REMARK 500 LYS A 465 -92.43 -83.96 REMARK 500 LEU A 466 90.72 41.38 REMARK 500 PRO A 467 -158.76 18.98 REMARK 500 PRO A 468 -66.83 -99.17 REMARK 500 LYS A 469 153.48 177.72 REMARK 500 ARG A 482 -79.81 55.44 REMARK 500 LEU A 483 51.20 31.86 REMARK 500 SER B 266 -169.01 -64.87 REMARK 500 GLN B 286 -64.50 69.49 REMARK 500 ARG B 296 41.86 -71.04 REMARK 500 ASN B 298 -60.75 57.71 REMARK 500 ILE B 299 145.46 65.15 REMARK 500 ARG B 337 -119.88 66.60 REMARK 500 LEU B 338 73.57 16.71 REMARK 500 SER B 413 -132.31 64.71 REMARK 500 GLU B 414 -75.36 -127.08 REMARK 500 LEU B 425 -74.89 -62.46 REMARK 500 ILE B 426 82.29 -60.28 REMARK 500 HIS B 458 77.48 48.88 REMARK 500 SER B 477 21.33 -75.36 REMARK 500 ARG B 482 -80.05 54.66 REMARK 500 LEU B 483 35.89 25.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 467 PRO A 468 149.62 REMARK 500 LEU B 338 SER B 339 147.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8A4 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8A4 B 601 DBREF 5UHI A 265 507 UNP P51449 RORG_HUMAN 265 507 DBREF 5UHI B 265 507 UNP P51449 RORG_HUMAN 265 507 SEQADV 5UHI GLY A 250 UNP P51449 EXPRESSION TAG SEQADV 5UHI HIS A 251 UNP P51449 EXPRESSION TAG SEQADV 5UHI HIS A 252 UNP P51449 EXPRESSION TAG SEQADV 5UHI HIS A 253 UNP P51449 EXPRESSION TAG SEQADV 5UHI HIS A 254 UNP P51449 EXPRESSION TAG SEQADV 5UHI HIS A 255 UNP P51449 EXPRESSION TAG SEQADV 5UHI HIS A 256 UNP P51449 EXPRESSION TAG SEQADV 5UHI GLY A 257 UNP P51449 EXPRESSION TAG SEQADV 5UHI GLU A 258 UNP P51449 EXPRESSION TAG SEQADV 5UHI ASN A 259 UNP P51449 EXPRESSION TAG SEQADV 5UHI LEU A 260 UNP P51449 EXPRESSION TAG SEQADV 5UHI TYR A 261 UNP P51449 EXPRESSION TAG SEQADV 5UHI PHE A 262 UNP P51449 EXPRESSION TAG SEQADV 5UHI GLN A 263 UNP P51449 EXPRESSION TAG SEQADV 5UHI GLY A 264 UNP P51449 EXPRESSION TAG SEQADV 5UHI GLY B 250 UNP P51449 EXPRESSION TAG SEQADV 5UHI HIS B 251 UNP P51449 EXPRESSION TAG SEQADV 5UHI HIS B 252 UNP P51449 EXPRESSION TAG SEQADV 5UHI HIS B 253 UNP P51449 EXPRESSION TAG SEQADV 5UHI HIS B 254 UNP P51449 EXPRESSION TAG SEQADV 5UHI HIS B 255 UNP P51449 EXPRESSION TAG SEQADV 5UHI HIS B 256 UNP P51449 EXPRESSION TAG SEQADV 5UHI GLY B 257 UNP P51449 EXPRESSION TAG SEQADV 5UHI GLU B 258 UNP P51449 EXPRESSION TAG SEQADV 5UHI ASN B 259 UNP P51449 EXPRESSION TAG SEQADV 5UHI LEU B 260 UNP P51449 EXPRESSION TAG SEQADV 5UHI TYR B 261 UNP P51449 EXPRESSION TAG SEQADV 5UHI PHE B 262 UNP P51449 EXPRESSION TAG SEQADV 5UHI GLN B 263 UNP P51449 EXPRESSION TAG SEQADV 5UHI GLY B 264 UNP P51449 EXPRESSION TAG SEQRES 1 A 258 GLY HIS HIS HIS HIS HIS HIS GLY GLU ASN LEU TYR PHE SEQRES 2 A 258 GLN GLY ALA SER LEU THR GLU ILE GLU HIS LEU VAL GLN SEQRES 3 A 258 SER VAL CYS LYS SER TYR ARG GLU THR CYS GLN LEU ARG SEQRES 4 A 258 LEU GLU ASP LEU LEU ARG GLN ARG SER ASN ILE PHE SER SEQRES 5 A 258 ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SER MET TRP SEQRES 6 A 258 GLU MET TRP GLU ARG CYS ALA HIS HIS LEU THR GLU ALA SEQRES 7 A 258 ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG LEU SER GLY SEQRES 8 A 258 PHE MET GLU LEU CYS GLN ASN ASP GLN ILE VAL LEU LEU SEQRES 9 A 258 LYS ALA GLY ALA MET GLU VAL VAL LEU VAL ARG MET CYS SEQRES 10 A 258 ARG ALA TYR ASN ALA ASP ASN ARG THR VAL PHE PHE GLU SEQRES 11 A 258 GLY LYS TYR GLY GLY MET GLU LEU PHE ARG ALA LEU GLY SEQRES 12 A 258 CYS SER GLU LEU ILE SER SER ILE PHE ASP PHE SER HIS SEQRES 13 A 258 SER LEU SER ALA LEU HIS PHE SER GLU ASP GLU ILE ALA SEQRES 14 A 258 LEU TYR THR ALA LEU VAL LEU ILE ASN ALA HIS ARG PRO SEQRES 15 A 258 GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN LEU GLN TYR SEQRES 16 A 258 ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU CYS LYS THR SEQRES 17 A 258 HIS ARG GLN SER ILE LEU ALA LYS LEU PRO PRO LYS GLY SEQRES 18 A 258 LYS LEU ARG SER LEU CYS SER GLN HIS VAL GLU ARG LEU SEQRES 19 A 258 GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL VAL GLN ALA SEQRES 20 A 258 ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SER SEQRES 1 B 258 GLY HIS HIS HIS HIS HIS HIS GLY GLU ASN LEU TYR PHE SEQRES 2 B 258 GLN GLY ALA SER LEU THR GLU ILE GLU HIS LEU VAL GLN SEQRES 3 B 258 SER VAL CYS LYS SER TYR ARG GLU THR CYS GLN LEU ARG SEQRES 4 B 258 LEU GLU ASP LEU LEU ARG GLN ARG SER ASN ILE PHE SER SEQRES 5 B 258 ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SER MET TRP SEQRES 6 B 258 GLU MET TRP GLU ARG CYS ALA HIS HIS LEU THR GLU ALA SEQRES 7 B 258 ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG LEU SER GLY SEQRES 8 B 258 PHE MET GLU LEU CYS GLN ASN ASP GLN ILE VAL LEU LEU SEQRES 9 B 258 LYS ALA GLY ALA MET GLU VAL VAL LEU VAL ARG MET CYS SEQRES 10 B 258 ARG ALA TYR ASN ALA ASP ASN ARG THR VAL PHE PHE GLU SEQRES 11 B 258 GLY LYS TYR GLY GLY MET GLU LEU PHE ARG ALA LEU GLY SEQRES 12 B 258 CYS SER GLU LEU ILE SER SER ILE PHE ASP PHE SER HIS SEQRES 13 B 258 SER LEU SER ALA LEU HIS PHE SER GLU ASP GLU ILE ALA SEQRES 14 B 258 LEU TYR THR ALA LEU VAL LEU ILE ASN ALA HIS ARG PRO SEQRES 15 B 258 GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN LEU GLN TYR SEQRES 16 B 258 ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU CYS LYS THR SEQRES 17 B 258 HIS ARG GLN SER ILE LEU ALA LYS LEU PRO PRO LYS GLY SEQRES 18 B 258 LYS LEU ARG SER LEU CYS SER GLN HIS VAL GLU ARG LEU SEQRES 19 B 258 GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL VAL GLN ALA SEQRES 20 B 258 ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SER HET 8A4 A 601 40 HET 8A4 B 601 40 HETNAM 8A4 (R)-(4-CHLORO-2-METHOXY-3-{[4-(1H-PYRAZOL-1-YL) HETNAM 2 8A4 PHENYL]METHYL}QUINOLIN-6-YL)(4-CHLOROPHENYL)(1-METHYL- HETNAM 3 8A4 1H-IMIDAZOL-5-YL)METHANOL FORMUL 3 8A4 2(C31 H25 CL2 N5 O2) HELIX 1 AA1 SER A 266 CYS A 285 1 20 HELIX 2 AA2 ARG A 288 GLN A 295 1 8 HELIX 3 AA3 SER A 301 ARG A 310 1 10 HELIX 4 AA4 SER A 312 LEU A 338 1 27 HELIX 5 AA5 GLY A 340 LEU A 344 5 5 HELIX 6 AA6 CYS A 345 MET A 365 1 21 HELIX 7 AA7 GLU A 386 GLY A 392 5 7 HELIX 8 AA8 CYS A 393 ALA A 409 1 17 HELIX 9 AA9 SER A 413 ILE A 426 1 14 HELIX 10 AB1 GLU A 435 LYS A 456 1 22 HELIX 11 AB2 GLY A 470 LEU A 475 1 6 HELIX 12 AB3 GLU B 269 CYS B 285 1 17 HELIX 13 AB4 ARG B 288 GLN B 295 1 8 HELIX 14 AB5 SER B 301 ARG B 310 1 10 HELIX 15 AB6 SER B 312 LYS B 336 1 25 HELIX 16 AB7 GLY B 340 LEU B 344 5 5 HELIX 17 AB8 CYS B 345 MET B 365 1 21 HELIX 18 AB9 GLY B 384 GLY B 392 5 9 HELIX 19 AC1 CYS B 393 ALA B 409 1 17 HELIX 20 AC2 GLU B 414 ILE B 426 1 13 HELIX 21 AC3 GLU B 435 LYS B 456 1 22 HELIX 22 AC4 ARG B 459 LEU B 463 5 5 HELIX 23 AC5 GLY B 470 LEU B 475 1 6 SHEET 1 AA1 3 TYR A 369 ASN A 370 0 SHEET 2 AA1 3 THR A 375 PHE A 378 -1 O THR A 375 N ASN A 370 SHEET 3 AA1 3 LYS A 381 TYR A 382 -1 O LYS A 381 N PHE A 378 SHEET 1 AA2 3 TYR B 369 ASN B 370 0 SHEET 2 AA2 3 THR B 375 PHE B 378 -1 O THR B 375 N ASN B 370 SHEET 3 AA2 3 LYS B 381 GLY B 383 -1 O GLY B 383 N VAL B 376 CISPEP 1 ARG A 296 SER A 297 0 11.72 SITE 1 AC1 13 GLN A 286 LEU A 287 HIS A 323 LEU A 324 SITE 2 AC1 13 MET A 358 MET A 365 PHE A 377 GLU A 379 SITE 3 AC1 13 PHE A 388 LEU A 396 ILE A 400 LEU A 475 SITE 4 AC1 13 VAL A 480 SITE 1 AC2 11 GLN B 286 LEU B 287 HIS B 323 MET B 358 SITE 2 AC2 11 MET B 365 PHE B 377 GLU B 379 PHE B 388 SITE 3 AC2 11 LEU B 396 ILE B 400 VAL B 480 CRYST1 104.350 104.323 123.577 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009583 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009586 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008092 0.00000 MASTER 472 0 2 23 6 0 7 6 0 0 0 40 END