HEADER VIRUS 01-DEC-16 5MJV TITLE REBUILD AND RE-REFINED MODEL FOR HUMAN PARECHOVIRUS 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID SUBUNIT VP1; COMPND 3 CHAIN: A; COMPND 4 EC: 3.6.1.15,3.4.22.28,2.7.7.48; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAPSID SUBUNIT VP3; COMPND 8 CHAIN: B; COMPND 9 EC: 3.6.1.15,3.4.22.28,2.7.7.48; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CAPSID SUBUNIT VP0; COMPND 13 CHAIN: C; COMPND 14 EC: 3.6.1.15,3.4.22.28,2.7.7.48; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: RNA (5'-R(*GP*UP*UP*UP*UP*U)-3'); COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN PARECHOVIRUS 1 (STRAIN HARRIS); SOURCE 3 ORGANISM_COMMON: HPEV-1; SOURCE 4 ORGANISM_TAXID: 103911; SOURCE 5 STRAIN: HARRIS; SOURCE 6 ATCC: VR-52; SOURCE 7 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 8 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM_CELL_LINE: A549; SOURCE 11 EXPRESSION_SYSTEM_ATCC_NUMBER: CCL-185; SOURCE 12 EXPRESSION_SYSTEM_ORGAN: LUNG; SOURCE 13 EXPRESSION_SYSTEM_TISSUE: LUNG CARCINOMA; SOURCE 14 MOL_ID: 2; SOURCE 15 ORGANISM_SCIENTIFIC: HUMAN PARECHOVIRUS 1 (STRAIN HARRIS); SOURCE 16 ORGANISM_COMMON: HPEV-1; SOURCE 17 ORGANISM_TAXID: 103911; SOURCE 18 STRAIN: HARRIS; SOURCE 19 CELL_LINE: A549; SOURCE 20 ATCC: VR-52; SOURCE 21 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 22 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 24 EXPRESSION_SYSTEM_CELL_LINE: A549; SOURCE 25 EXPRESSION_SYSTEM_ATCC_NUMBER: CCL-185; SOURCE 26 EXPRESSION_SYSTEM_ORGAN: LUNG; SOURCE 27 EXPRESSION_SYSTEM_TISSUE: LUNG CARCINOMA; SOURCE 28 MOL_ID: 3; SOURCE 29 ORGANISM_SCIENTIFIC: HUMAN PARECHOVIRUS 1 (STRAIN HARRIS); SOURCE 30 ORGANISM_COMMON: HPEV-1; SOURCE 31 ORGANISM_TAXID: 103911; SOURCE 32 STRAIN: HARRIS; SOURCE 33 ATCC: VR-52; SOURCE 34 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 35 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 36 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 37 EXPRESSION_SYSTEM_CELL_LINE: A549; SOURCE 38 EXPRESSION_SYSTEM_ATCC_NUMBER: CCL-185; SOURCE 39 EXPRESSION_SYSTEM_ORGAN: LUNG; SOURCE 40 EXPRESSION_SYSTEM_TISSUE: LUNG CARCINOMA; SOURCE 41 MOL_ID: 4; SOURCE 42 ORGANISM_SCIENTIFIC: ECHOVIRUS 22 (STRAIN HARRIS); SOURCE 43 ORGANISM_COMMON: HPEV-1; SOURCE 44 ORGANISM_TAXID: 103911; SOURCE 45 ATCC: VR-52; SOURCE 46 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 47 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 48 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 49 EXPRESSION_SYSTEM_CELL_LINE: A549; SOURCE 50 EXPRESSION_SYSTEM_ATCC_NUMBER: CCL-185; SOURCE 51 EXPRESSION_SYSTEM_ORGAN: LUNG; SOURCE 52 EXPRESSION_SYSTEM_TISSUE: LUNG CARCINOMA KEYWDS VIRUS, PARECHOVIRUS, PICORNAVIRUS, RNA, HUMAN PARECHOVIRUS 1, HPEV1, KEYWDS 2 HPEV EXPDTA X-RAY DIFFRACTION AUTHOR S.SHAKEEL,E.C.DYKEMAN,S.J.WHITE,A.ORA,J.J.B.COCKBURN,S.J.BUTCHER, AUTHOR 2 P.G.STOCKLEY,R.TWAROCK REVDAT 4 31-JAN-18 5MJV 1 REMARK REVDAT 3 30-AUG-17 5MJV 1 REMARK REVDAT 2 08-MAR-17 5MJV 1 JRNL REVDAT 1 11-JAN-17 5MJV 0 SPRSDE 08-MAR-17 5MJV 5M74 JRNL AUTH S.SHAKEEL,E.C.DYKEMAN,S.J.WHITE,A.ORA,J.J.COCKBURN, JRNL AUTH 2 S.J.BUTCHER,P.G.STOCKLEY,R.TWAROCK JRNL TITL GENOMIC RNA FOLDING MEDIATES ASSEMBLY OF HUMAN PARECHOVIRUS. JRNL REF NAT COMMUN V. 8 5 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28232749 JRNL DOI 10.1038/S41467-016-0011-Z REMARK 2 REMARK 2 RESOLUTION. 3.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 345.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 82.7 REMARK 3 NUMBER OF REFLECTIONS : 221407 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.258 REMARK 3 R VALUE (WORKING SET) : 0.258 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5366 REMARK 3 NUCLEIC ACID ATOMS : 120 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MJV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1200002565. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 233083 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.090 REMARK 200 RESOLUTION RANGE LOW (A) : 345.977 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 78.2 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.35400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 31.8 REMARK 200 DATA REDUNDANCY IN SHELL : 1.30 REMARK 200 R MERGE FOR SHELL (I) : 0.90400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1BEV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS PH 8.0, 0.6M AMMONIUM REMARK 280 SULFATE, 0.1M MGCL2, 5% (W/V) GLYCEROL, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 166.43000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 166.43000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 166.43000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 166.43000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 166.43000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 166.43000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.563665 -0.755755 0.333342 146.57660 REMARK 350 BIOMT2 2 0.755761 0.309017 -0.577350 -23.22971 REMARK 350 BIOMT3 2 0.333327 0.577359 0.745352 -111.97563 REMARK 350 BIOMT1 3 -0.142341 -0.467076 0.872685 209.42649 REMARK 350 BIOMT2 3 0.467093 -0.809017 -0.356814 145.01800 REMARK 350 BIOMT3 3 0.872676 0.356836 0.333324 -159.99085 REMARK 350 BIOMT1 4 -0.142341 0.467093 0.872676 101.69325 REMARK 350 BIOMT2 4 -0.467076 -0.809017 0.356836 272.23051 REMARK 350 BIOMT3 4 0.872685 -0.356814 0.333324 -77.69026 REMARK 350 BIOMT1 5 0.563665 0.755761 0.333327 -27.73944 REMARK 350 BIOMT2 5 -0.755755 0.309017 0.577359 182.60446 REMARK 350 BIOMT3 5 0.333342 -0.577350 0.745352 21.18952 REMARK 350 BIOMT1 6 -0.936336 0.110270 0.333341 346.32642 REMARK 350 BIOMT2 6 0.110270 -0.809007 0.577364 138.55284 REMARK 350 BIOMT3 6 0.333341 0.577364 0.745342 -111.97817 REMARK 350 BIOMT1 7 -0.333330 0.934173 -0.127328 169.19391 REMARK 350 BIOMT2 7 -0.356810 0.000012 0.934177 108.85817 REMARK 350 BIOMT3 7 0.872684 0.356821 0.333318 -159.99031 REMARK 350 BIOMT1 8 0.475684 0.467077 -0.745362 112.89258 REMARK 350 BIOMT2 8 0.110275 0.809020 0.577345 -48.04711 REMARK 350 BIOMT3 8 0.872677 -0.356828 0.333331 -77.68749 REMARK 350 BIOMT1 9 0.372676 -0.645506 -0.666659 255.22895 REMARK 350 BIOMT2 9 0.866028 0.499995 -0.000003 -115.32524 REMARK 350 BIOMT3 9 0.333328 -0.577344 0.745363 21.19058 REMARK 350 BIOMT1 10 -0.500000 -0.866025 0.000016 399.49899 REMARK 350 BIOMT2 10 0.866025 -0.500000 0.000008 -0.00013 REMARK 350 BIOMT3 10 0.000001 0.000018 1.000000 -0.00222 REMARK 350 BIOMT1 11 0.500002 -0.866024 -0.000001 199.74988 REMARK 350 BIOMT2 11 -0.866024 -0.500002 0.000000 345.97768 REMARK 350 BIOMT3 11 -0.000001 0.000000 -1.000000 166.43369 REMARK 350 BIOMT1 12 -0.372674 -0.645495 0.666670 293.15603 REMARK 350 BIOMT2 12 -0.866029 0.499993 -0.000005 230.65363 REMARK 350 BIOMT3 12 -0.333327 -0.577358 -0.745353 278.40921 REMARK 350 BIOMT1 13 -0.475685 0.467089 0.745353 178.87452 REMARK 350 BIOMT2 13 -0.110276 0.809009 -0.577359 92.09991 REMARK 350 BIOMT3 13 -0.872676 -0.356836 -0.333324 326.42446 REMARK 350 BIOMT1 14 0.333328 0.934176 0.127311 14.83851 REMARK 350 BIOMT2 14 0.356810 -0.000004 -0.934177 121.79305 REMARK 350 BIOMT3 14 -0.872685 0.356813 -0.333324 244.12399 REMARK 350 BIOMT1 15 0.936335 0.110266 -0.333343 27.74019 REMARK 350 BIOMT2 15 -0.110268 -0.809017 -0.577349 278.69814 REMARK 350 BIOMT3 15 -0.333342 0.577350 -0.745352 145.24426 REMARK 350 BIOMT1 16 -0.563666 0.755754 -0.333340 252.92369 REMARK 350 BIOMT2 16 0.755754 0.309008 -0.577364 -23.22614 REMARK 350 BIOMT3 16 -0.333340 -0.577364 -0.745342 278.41168 REMARK 350 BIOMT1 17 0.142340 0.467078 -0.872684 190.07344 REMARK 350 BIOMT2 17 0.467077 -0.809022 -0.356821 145.02228 REMARK 350 BIOMT3 17 -0.872684 -0.356821 -0.333317 326.42392 REMARK 350 BIOMT1 18 0.142342 -0.467091 -0.872677 297.80640 REMARK 350 BIOMT2 18 -0.467091 -0.809012 0.356828 272.23357 REMARK 350 BIOMT3 18 -0.872677 0.356828 -0.333330 244.12108 REMARK 350 BIOMT1 19 -0.563663 -0.755762 -0.333328 427.23929 REMARK 350 BIOMT2 19 -0.755762 0.309026 0.577345 182.60605 REMARK 350 BIOMT3 19 -0.333328 0.577345 -0.745363 145.24289 REMARK 350 BIOMT1 20 -1.000000 -0.000002 0.000000 399.50025 REMARK 350 BIOMT2 20 -0.000002 1.000000 -0.000018 0.00191 REMARK 350 BIOMT3 20 0.000000 -0.000018 -1.000000 166.43564 REMARK 350 BIOMT1 21 -0.333329 -0.934176 -0.127309 384.66147 REMARK 350 BIOMT2 21 0.356824 -0.000012 -0.934172 121.79061 REMARK 350 BIOMT3 21 0.872679 -0.356813 0.333341 -77.69051 REMARK 350 BIOMT1 22 -0.936335 -0.110264 0.333344 371.75945 REMARK 350 BIOMT2 22 -0.110264 -0.809027 -0.577336 278.69742 REMARK 350 BIOMT3 22 0.333344 -0.577336 0.745363 21.18645 REMARK 350 BIOMT1 23 -0.500000 0.866025 0.000001 199.74961 REMARK 350 BIOMT2 23 -0.866025 -0.500000 0.000018 345.97621 REMARK 350 BIOMT3 23 0.000016 0.000008 1.000000 -0.00417 REMARK 350 BIOMT1 24 0.372676 0.645494 -0.666670 106.34371 REMARK 350 BIOMT2 24 -0.866023 0.500005 0.000006 230.64997 REMARK 350 BIOMT3 24 0.333342 0.577349 0.745353 -111.97765 REMARK 350 BIOMT1 25 0.475685 -0.467091 -0.745352 220.62553 REMARK 350 BIOMT2 25 -0.110260 0.809014 -0.577355 92.09565 REMARK 350 BIOMT3 25 0.872678 0.356821 0.333335 -159.99045 REMARK 350 BIOMT1 26 0.166658 0.645495 -0.745360 154.04411 REMARK 350 BIOMT2 26 -0.645506 -0.500000 -0.577340 349.97342 REMARK 350 BIOMT3 26 -0.745350 0.577353 0.333342 137.77694 REMARK 350 BIOMT1 27 0.333331 -0.356824 -0.872678 246.93984 REMARK 350 BIOMT2 27 -0.934173 0.000004 -0.356821 331.62017 REMARK 350 BIOMT3 27 0.127326 0.934172 -0.333334 -22.21182 REMARK 350 BIOMT1 28 -0.372675 -0.866029 -0.333327 401.80592 REMARK 350 BIOMT2 28 -0.645495 0.499993 -0.577358 234.64744 REMARK 350 BIOMT3 28 0.666670 -0.000005 -0.745353 12.07591 REMARK 350 BIOMT1 29 -0.975682 -0.178417 0.127328 404.62268 REMARK 350 BIOMT2 29 -0.178417 0.309000 -0.934177 193.06823 REMARK 350 BIOMT3 29 0.127328 -0.934177 -0.333318 193.25565 REMARK 350 BIOMT1 30 -0.642356 0.755757 -0.127322 251.49746 REMARK 350 BIOMT2 30 -0.178423 -0.309030 -0.934166 264.34361 REMARK 350 BIOMT3 30 -0.745348 -0.577350 0.333352 270.94315 REMARK 350 BIOMT1 31 0.642354 0.755760 0.127309 -26.31336 REMARK 350 BIOMT2 31 0.178424 -0.309013 0.934171 37.58442 REMARK 350 BIOMT3 31 0.745350 -0.577354 -0.333341 28.65678 REMARK 350 BIOMT1 32 0.975682 -0.178417 -0.127325 36.02915 REMARK 350 BIOMT2 32 0.178416 0.309017 0.934171 -33.68895 REMARK 350 BIOMT3 32 -0.127326 -0.934171 0.333335 188.64547 REMARK 350 BIOMT1 33 0.372676 -0.866023 0.333342 197.44320 REMARK 350 BIOMT2 33 0.645494 0.500005 0.577349 -119.32017 REMARK 350 BIOMT3 33 -0.666670 0.000006 0.745353 154.35760 REMARK 350 BIOMT1 34 -0.333330 -0.356810 0.872684 234.86007 REMARK 350 BIOMT2 34 0.934173 0.000012 0.356821 -100.96981 REMARK 350 BIOMT3 34 -0.127328 0.934177 0.333318 -26.82216 REMARK 350 BIOMT1 35 -0.166660 0.645507 0.745349 96.57091 REMARK 350 BIOMT2 35 0.645507 -0.499988 0.577349 -3.99743 REMARK 350 BIOMT3 35 0.745349 0.577349 -0.333352 -104.50953 REMARK 350 BIOMT1 36 -0.475684 -0.467079 0.745360 286.60777 REMARK 350 BIOMT2 36 0.110258 0.809025 0.577340 -48.04407 REMARK 350 BIOMT3 36 -0.872679 0.356814 -0.333341 244.12398 REMARK 350 BIOMT1 37 -0.372678 0.645505 0.666659 144.27155 REMARK 350 BIOMT2 37 0.866021 0.500007 -0.000015 -115.32427 REMARK 350 BIOMT3 37 -0.333344 0.577335 -0.745363 145.24710 REMARK 350 BIOMT1 38 0.499998 0.866027 -0.000016 0.00125 REMARK 350 BIOMT2 38 0.866026 -0.499998 -0.000009 0.00090 REMARK 350 BIOMT3 38 -0.000016 -0.000009 -1.000000 166.43786 REMARK 350 BIOMT1 39 0.936335 -0.110268 -0.333342 53.17353 REMARK 350 BIOMT2 39 0.110266 -0.809017 0.577350 138.55597 REMARK 350 BIOMT3 39 -0.333343 -0.577349 -0.745352 278.41136 REMARK 350 BIOMT1 40 0.333331 -0.934173 0.127326 230.30609 REMARK 350 BIOMT2 40 -0.356824 0.000004 0.934172 108.86254 REMARK 350 BIOMT3 40 -0.872678 -0.356821 -0.333334 326.42402 REMARK 350 BIOMT1 41 -0.333329 0.356824 0.872679 152.55968 REMARK 350 BIOMT2 41 -0.934176 -0.000012 -0.356813 331.62194 REMARK 350 BIOMT3 41 -0.127309 -0.934172 0.333341 188.64159 REMARK 350 BIOMT1 42 0.372676 0.866028 0.333328 -2.30619 REMARK 350 BIOMT2 42 -0.645506 0.499995 -0.577344 234.64826 REMARK 350 BIOMT3 42 -0.666659 -0.000003 0.745363 154.35558 REMARK 350 BIOMT1 43 0.975682 0.178416 -0.127326 -5.12286 REMARK 350 BIOMT2 43 -0.178417 0.309017 -0.934171 193.06584 REMARK 350 BIOMT3 43 -0.127325 0.934171 0.333335 -26.82342 REMARK 350 BIOMT1 44 0.642356 -0.755756 0.127324 148.00221 REMARK 350 BIOMT2 44 -0.178409 -0.309021 -0.934171 264.34017 REMARK 350 BIOMT3 44 0.745352 0.577355 -0.333335 -104.51219 REMARK 350 BIOMT1 45 -0.166657 -0.645493 0.745361 245.45538 REMARK 350 BIOMT2 45 -0.645493 -0.500012 -0.577344 349.97255 REMARK 350 BIOMT3 45 0.745361 -0.577344 -0.333331 28.65251 REMARK 350 BIOMT1 46 0.642354 0.178424 0.745350 -11.16278 REMARK 350 BIOMT2 46 0.755760 -0.309013 -0.577354 48.04577 REMARK 350 BIOMT3 46 0.127309 0.934171 -0.333341 -22.20787 REMARK 350 BIOMT1 47 0.745363 0.000008 0.666658 -4.61442 REMARK 350 BIOMT2 47 0.000008 -1.000000 0.000003 230.65038 REMARK 350 BIOMT3 47 0.666658 0.000003 -0.745363 12.07821 REMARK 350 BIOMT1 48 0.642356 -0.178409 0.745352 29.98875 REMARK 350 BIOMT2 48 -0.755756 -0.309021 0.577355 253.88090 REMARK 350 BIOMT3 48 0.127324 -0.934171 -0.333335 193.25719 REMARK 350 BIOMT1 49 0.475685 -0.110260 0.872678 44.82631 REMARK 350 BIOMT2 49 -0.467091 0.809014 0.356821 85.63354 REMARK 350 BIOMT3 49 -0.745352 -0.577355 0.333335 270.94589 REMARK 350 BIOMT1 50 0.475684 0.110275 0.872677 19.39327 REMARK 350 BIOMT2 50 0.467077 0.809020 -0.356828 -41.57957 REMARK 350 BIOMT3 50 -0.745362 0.577345 0.333331 137.78115 REMARK 350 BIOMT1 51 -0.475684 0.110258 -0.872679 354.67374 REMARK 350 BIOMT2 51 -0.467079 0.809025 0.356814 85.63056 REMARK 350 BIOMT3 51 0.745360 0.577340 -0.333341 -104.51176 REMARK 350 BIOMT1 52 -0.475685 -0.110276 -0.872676 380.10707 REMARK 350 BIOMT2 52 0.467089 0.809009 -0.356836 -41.58014 REMARK 350 BIOMT3 52 0.745353 -0.577359 -0.333324 28.65522 REMARK 350 BIOMT1 53 -0.642356 -0.178423 -0.745348 410.66292 REMARK 350 BIOMT2 53 0.755757 -0.309030 -0.577350 48.04809 REMARK 350 BIOMT3 53 -0.127322 -0.934166 0.333352 188.64266 REMARK 350 BIOMT1 54 -0.745363 -0.000006 -0.666658 404.11416 REMARK 350 BIOMT2 54 -0.000006 -1.000000 0.000015 230.65209 REMARK 350 BIOMT3 54 -0.666658 0.000015 0.745363 154.35335 REMARK 350 BIOMT1 55 -0.642355 0.178409 -0.745353 369.51094 REMARK 350 BIOMT2 55 -0.755760 -0.309004 0.577359 253.87932 REMARK 350 BIOMT3 55 -0.127311 0.934177 0.333325 -26.82605 REMARK 350 BIOMT1 56 0.166658 -0.645506 -0.745350 302.92935 REMARK 350 BIOMT2 56 0.645495 -0.500000 0.577353 -3.99389 REMARK 350 BIOMT3 56 -0.745360 -0.577340 0.333342 270.94524 REMARK 350 BIOMT1 57 -0.642355 -0.755760 -0.127311 425.81352 REMARK 350 BIOMT2 57 0.178409 -0.309004 0.934177 37.58588 REMARK 350 BIOMT3 57 -0.745353 0.577359 0.333325 137.77819 REMARK 350 BIOMT1 58 -0.975683 0.178416 0.127323 363.47117 REMARK 350 BIOMT2 58 0.178416 0.309034 0.934166 -33.69046 REMARK 350 BIOMT3 58 0.127323 0.934166 -0.333351 -22.20923 REMARK 350 BIOMT1 59 -0.372678 0.866022 -0.333344 202.05730 REMARK 350 BIOMT2 59 0.645505 0.500007 0.577335 -119.32143 REMARK 350 BIOMT3 59 0.666659 -0.000015 -0.745363 12.08015 REMARK 350 BIOMT1 60 0.333328 0.356810 -0.872685 164.64040 REMARK 350 BIOMT2 60 0.934176 -0.000004 0.356813 -100.96793 REMARK 350 BIOMT3 60 0.127311 -0.934177 -0.333324 193.25958 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 1 REMARK 465 SER A 2 REMARK 465 TRP A 3 REMARK 465 GLY A 4 REMARK 465 SER A 5 REMARK 465 GLN A 6 REMARK 465 MET A 7 REMARK 465 ASP A 8 REMARK 465 LEU A 9 REMARK 465 THR A 10 REMARK 465 ASP A 11 REMARK 465 PRO A 12 REMARK 465 LEU A 13 REMARK 465 CYS A 14 REMARK 465 ILE A 15 REMARK 465 GLU A 16 REMARK 465 ASP A 17 REMARK 465 ASP A 18 REMARK 465 THR A 19 REMARK 465 GLU A 20 REMARK 465 ASN A 21 REMARK 465 CYS A 22 REMARK 465 LYS A 23 REMARK 465 GLN A 24 REMARK 465 SER A 217 REMARK 465 SER A 218 REMARK 465 ARG A 219 REMARK 465 ALA A 220 REMARK 465 LEU A 221 REMARK 465 ARG A 222 REMARK 465 GLY A 223 REMARK 465 ASP A 224 REMARK 465 MET A 225 REMARK 465 ALA A 226 REMARK 465 ASN A 227 REMARK 465 LEU A 228 REMARK 465 THR A 229 REMARK 465 ASN A 230 REMARK 465 GLN A 231 REMARK 465 SER A 232 REMARK 465 PRO A 233 REMARK 465 TYR A 234 REMARK 465 ALA B 1 REMARK 465 PRO B 2 REMARK 465 ASN B 3 REMARK 465 GLY B 4 REMARK 465 LYS B 5 REMARK 465 LYS B 6 REMARK 465 LYS B 7 REMARK 465 ASN B 8 REMARK 465 TRP B 9 REMARK 465 LYS B 10 REMARK 465 LYS B 11 REMARK 465 ILE B 12 REMARK 465 MET B 13 REMARK 465 THR B 14 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 THR C 3 REMARK 465 ILE C 4 REMARK 465 LYS C 5 REMARK 465 SER C 6 REMARK 465 ILE C 7 REMARK 465 ALA C 8 REMARK 465 ASP C 9 REMARK 465 MET C 10 REMARK 465 ALA C 11 REMARK 465 THR C 12 REMARK 465 GLY C 13 REMARK 465 VAL C 14 REMARK 465 VAL C 15 REMARK 465 SER C 16 REMARK 465 SER C 17 REMARK 465 VAL C 18 REMARK 465 ASP C 19 REMARK 465 SER C 20 REMARK 465 THR C 21 REMARK 465 ILE C 22 REMARK 465 ASN C 23 REMARK 465 ALA C 24 REMARK 465 VAL C 25 REMARK 465 ASN C 26 REMARK 465 GLU C 27 REMARK 465 LYS C 28 REMARK 465 VAL C 29 REMARK 465 GLU C 30 REMARK 465 SER C 31 REMARK 465 ASN C 289 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 54 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 123 CG CD OE1 OE2 REMARK 470 ARG A 124 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 186 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 194 CG CD CE NZ REMARK 470 MET B 15 CG SD CE REMARK 470 GLU B 90 CG CD OE1 OE2 REMARK 470 SER B 110 OG REMARK 470 THR B 246 OG1 CG2 REMARK 470 VAL C 32 CG1 CG2 REMARK 470 LYS C 43 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 80 OE2 GLU A 196 1.05 REMARK 500 CD GLU A 80 OE2 GLU A 196 1.74 REMARK 500 OG1 THR A 158 CE MET B 35 1.85 REMARK 500 OE1 GLU A 80 CD GLU A 196 1.90 REMARK 500 OD2 ASP B 84 NH2 ARG C 132 1.92 REMARK 500 NH2 ARG C 158 OD1 ASP C 236 1.94 REMARK 500 OH TYR A 164 OE2 GLU B 54 1.98 REMARK 500 O LYS C 234 OG SER C 237 2.00 REMARK 500 OG1 THR B 197 O MET B 199 2.01 REMARK 500 O GLY B 31 OG SER B 34 2.10 REMARK 500 NE2 GLN C 135 ND1 HIS C 138 2.11 REMARK 500 CG GLU A 80 OE2 GLU A 196 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR B 99 CE1 TYR B 99 CZ -0.089 REMARK 500 U D 2 O3' U D 3 P -0.098 REMARK 500 U D 3 O3' U D 4 P -0.093 REMARK 500 U D 5 O3' U D 6 P -0.111 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 173 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 CYS A 203 N - CA - C ANGL. DEV. = -18.1 DEGREES REMARK 500 U D 5 C2' - C3' - O3' ANGL. DEV. = -16.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 78 -68.83 -120.66 REMARK 500 GLN A 98 -50.18 -122.18 REMARK 500 THR A 111 131.85 -173.78 REMARK 500 ASP A 174 139.34 -36.76 REMARK 500 ASN A 175 -7.51 -59.86 REMARK 500 CYS A 203 109.17 -167.38 REMARK 500 GLN B 109 -7.34 83.87 REMARK 500 PHE B 135 -177.84 -171.61 REMARK 500 ASN B 185 47.57 -91.65 REMARK 500 PHE B 243 -66.33 -122.49 REMARK 500 ASN C 50 -148.24 -112.76 REMARK 500 VAL C 75 109.65 -54.32 REMARK 500 PRO C 90 172.84 -58.61 REMARK 500 SER C 92 52.38 38.66 REMARK 500 ASN C 97 10.57 58.09 REMARK 500 LYS C 143 -8.80 -57.28 REMARK 500 GLN C 149 1.60 -69.62 REMARK 500 VAL C 210 88.73 -152.74 REMARK 500 GLU C 216 -45.56 -130.81 REMARK 500 PRO C 250 156.03 -46.72 REMARK 500 PRO C 254 170.95 -56.06 REMARK 500 REMARK 500 REMARK: NULL DBREF 5MJV A 1 234 UNP Q66578 POLG_HPE1H 543 776 DBREF 5MJV B 1 253 UNP Q66578 POLG_HPE1H 290 542 DBREF 5MJV C 1 289 UNP Q66578 POLG_HPE1H 1 289 DBREF 5MJV D 1 6 PDB 5MJV 5MJV 1 6 SEQRES 1 A 234 ASN SER TRP GLY SER GLN MET ASP LEU THR ASP PRO LEU SEQRES 2 A 234 CYS ILE GLU ASP ASP THR GLU ASN CYS LYS GLN THR MET SEQRES 3 A 234 SER PRO ASN GLU LEU GLY LEU THR SER ALA GLN ASP ASP SEQRES 4 A 234 GLY PRO LEU GLY GLN GLU LYS PRO ASN TYR PHE LEU ASN SEQRES 5 A 234 PHE ARG SER MET ASN VAL ASP ILE PHE THR VAL SER HIS SEQRES 6 A 234 THR LYS VAL ASP ASN LEU PHE GLY ARG ALA TRP PHE PHE SEQRES 7 A 234 MET GLU HIS THR PHE THR ASN GLU GLY GLN TRP ARG VAL SEQRES 8 A 234 PRO LEU GLU PHE PRO LYS GLN GLY HIS GLY SER LEU SER SEQRES 9 A 234 LEU LEU PHE ALA TYR PHE THR GLY GLU LEU ASN ILE HIS SEQRES 10 A 234 VAL LEU PHE LEU SER GLU ARG GLY PHE LEU ARG VAL ALA SEQRES 11 A 234 HIS THR TYR ASP THR SER ASN ASP ARG VAL ASN PHE LEU SEQRES 12 A 234 SER SER ASN GLY VAL ILE THR VAL PRO ALA GLY GLU GLN SEQRES 13 A 234 MET THR LEU SER ALA PRO TYR TYR SER ASN LYS PRO LEU SEQRES 14 A 234 ARG THR VAL ARG ASP ASN ASN SER LEU GLY TYR LEU MET SEQRES 15 A 234 CYS LYS PRO PHE LEU THR GLY THR SER THR GLY LYS ILE SEQRES 16 A 234 GLU VAL TYR LEU SER LEU ARG CYS PRO ASN PHE PHE PHE SEQRES 17 A 234 PRO LEU PRO ALA PRO LYS VAL THR SER SER ARG ALA LEU SEQRES 18 A 234 ARG GLY ASP MET ALA ASN LEU THR ASN GLN SER PRO TYR SEQRES 1 B 253 ALA PRO ASN GLY LYS LYS LYS ASN TRP LYS LYS ILE MET SEQRES 2 B 253 THR MET SER THR LYS TYR LYS TRP THR ARG THR LYS ILE SEQRES 3 B 253 ASP ILE ALA GLU GLY PRO GLY SER MET ASN MET ALA ASN SEQRES 4 B 253 VAL LEU CYS THR THR GLY ALA GLN SER VAL ALA LEU VAL SEQRES 5 B 253 GLY GLU ARG ALA PHE TYR ASP PRO ARG THR ALA GLY SER SEQRES 6 B 253 LYS SER ARG PHE ASP ASP LEU VAL LYS ILE ALA GLN LEU SEQRES 7 B 253 PHE SER VAL MET ALA ASP SER THR THR PRO SER GLU ASN SEQRES 8 B 253 HIS GLY VAL ASP ALA LYS GLY TYR PHE LYS TRP SER ALA SEQRES 9 B 253 THR THR ALA PRO GLN SER ILE VAL HIS ARG ASN ILE VAL SEQRES 10 B 253 TYR LEU ARG LEU PHE PRO ASN LEU ASN VAL PHE VAL ASN SEQRES 11 B 253 SER TYR SER TYR PHE ARG GLY SER LEU VAL LEU ARG LEU SEQRES 12 B 253 SER VAL TYR ALA SER THR PHE ASN ARG GLY ARG LEU ARG SEQRES 13 B 253 MET GLY PHE PHE PRO ASN ALA THR THR ASP SER THR SER SEQRES 14 B 253 THR LEU ASP ASN ALA ILE TYR THR ILE CYS ASP ILE GLY SEQRES 15 B 253 SER ASP ASN SER PHE GLU ILE THR ILE PRO TYR SER PHE SEQRES 16 B 253 SER THR TRP MET ARG LYS THR ASN GLY HIS PRO ILE GLY SEQRES 17 B 253 LEU PHE GLN ILE GLU VAL LEU ASN ARG LEU THR TYR ASN SEQRES 18 B 253 SER SER SER PRO SER GLU VAL TYR CYS ILE VAL GLN GLY SEQRES 19 B 253 LYS MET GLY GLN ASP ALA ARG PHE PHE CYS PRO THR GLY SEQRES 20 B 253 SER VAL VAL THR PHE GLN SEQRES 1 C 289 MET GLU THR ILE LYS SER ILE ALA ASP MET ALA THR GLY SEQRES 2 C 289 VAL VAL SER SER VAL ASP SER THR ILE ASN ALA VAL ASN SEQRES 3 C 289 GLU LYS VAL GLU SER VAL GLY ASN GLU ILE GLY GLY ASN SEQRES 4 C 289 LEU LEU THR LYS VAL ALA ASP ASP ALA SER ASN ILE LEU SEQRES 5 C 289 GLY PRO ASN CYS PHE ALA THR THR ALA GLU PRO GLU ASN SEQRES 6 C 289 LYS ASN VAL VAL GLN ALA THR THR THR VAL ASN THR THR SEQRES 7 C 289 ASN LEU THR GLN HIS PRO SER ALA PRO THR MET PRO PHE SEQRES 8 C 289 SER PRO ASP PHE SER ASN VAL ASP ASN PHE HIS SER MET SEQRES 9 C 289 ALA TYR ASP ILE THR THR GLY ASP LYS ASN PRO SER LYS SEQRES 10 C 289 LEU VAL ARG LEU GLU THR HIS GLU TRP THR PRO SER TRP SEQRES 11 C 289 ALA ARG GLY TYR GLN ILE THR HIS VAL GLU LEU PRO LYS SEQRES 12 C 289 VAL PHE TRP ASP HIS GLN ASP LYS PRO ALA TYR GLY GLN SEQRES 13 C 289 SER ARG TYR PHE ALA ALA VAL ARG CYS GLY PHE HIS PHE SEQRES 14 C 289 GLN VAL GLN VAL ASN VAL ASN GLN GLY THR ALA GLY SER SEQRES 15 C 289 ALA LEU VAL VAL TYR GLU PRO LYS PRO VAL VAL THR TYR SEQRES 16 C 289 ASP SER LYS LEU GLU PHE GLY ALA PHE THR ASN LEU PRO SEQRES 17 C 289 HIS VAL LEU MET ASN LEU ALA GLU THR THR GLN ALA ASP SEQRES 18 C 289 LEU CYS ILE PRO TYR VAL ALA ASP THR ASN TYR VAL LYS SEQRES 19 C 289 THR ASP SER SER ASP LEU GLY GLN LEU LYS VAL TYR VAL SEQRES 20 C 289 TRP THR PRO LEU SER ILE PRO THR GLY SER ALA ASN GLN SEQRES 21 C 289 VAL ASP VAL THR ILE LEU GLY SER LEU LEU GLN LEU ASP SEQRES 22 C 289 PHE GLN ASN PRO ARG VAL PHE ALA GLN ASP VAL ASN ILE SEQRES 23 C 289 TYR ASP ASN SEQRES 1 D 6 G U U U U U HELIX 1 AA1 SER A 27 LEU A 31 5 5 HELIX 2 AA2 SER A 35 ASP A 39 5 5 HELIX 3 AA3 LYS A 67 PHE A 72 1 6 HELIX 4 AA4 GLY A 99 PHE A 107 5 9 HELIX 5 AA5 ASN A 137 ASN A 141 5 5 HELIX 6 AA6 PHE A 142 GLY A 147 1 6 HELIX 7 AA7 ASN B 39 THR B 44 1 6 HELIX 8 AA8 PRO B 60 GLY B 64 5 5 HELIX 9 AA9 LEU B 72 GLN B 77 1 6 HELIX 10 AB1 TYR B 118 LEU B 121 5 4 HELIX 11 AB2 PHE B 122 ASN B 130 1 9 HELIX 12 AB3 GLY C 37 ALA C 48 1 12 HELIX 13 AB4 THR C 109 ASN C 114 1 6 HELIX 14 AB5 PRO C 115 LYS C 117 5 3 HELIX 15 AB6 PRO C 142 ASP C 147 5 6 HELIX 16 AB7 ALA C 153 ARG C 158 1 6 HELIX 17 AB8 PRO C 189 TYR C 195 1 7 HELIX 18 AB9 ALA C 203 LEU C 207 5 5 SHEET 1 AA1 5 LEU A 33 THR A 34 0 SHEET 2 AA1 5 SER B 186 ILE B 191 -1 O SER B 186 N THR A 34 SHEET 3 AA1 5 LEU B 139 TYR B 146 -1 N LEU B 143 O PHE B 187 SHEET 4 AA1 5 GLU B 227 MET B 236 -1 O ILE B 231 N SER B 144 SHEET 5 AA1 5 SER B 80 VAL B 81 -1 N SER B 80 O GLY B 234 SHEET 1 AA2 5 LEU A 33 THR A 34 0 SHEET 2 AA2 5 SER B 186 ILE B 191 -1 O SER B 186 N THR A 34 SHEET 3 AA2 5 LEU B 139 TYR B 146 -1 N LEU B 143 O PHE B 187 SHEET 4 AA2 5 GLU B 227 MET B 236 -1 O ILE B 231 N SER B 144 SHEET 5 AA2 5 TYR B 99 SER B 103 -1 N TRP B 102 O VAL B 228 SHEET 1 AA3 5 TRP A 76 PHE A 83 0 SHEET 2 AA3 5 GLY A 193 PRO A 204 -1 O ILE A 195 N HIS A 81 SHEET 3 AA3 5 GLY A 112 LEU A 121 -1 N HIS A 117 O TYR A 198 SHEET 4 AA3 5 GLN A 156 ALA A 161 -1 O LEU A 159 N ILE A 116 SHEET 5 AA3 5 GLN B 47 SER B 48 1 O GLN B 47 N SER A 160 SHEET 1 AA4 4 TRP A 89 LEU A 93 0 SHEET 2 AA4 4 LEU A 178 PRO A 185 -1 O CYS A 183 N TRP A 89 SHEET 3 AA4 4 PHE A 126 THR A 132 -1 N ARG A 128 O LYS A 184 SHEET 4 AA4 4 ILE A 149 PRO A 152 -1 O VAL A 151 N LEU A 127 SHEET 1 AA5 2 TYR A 109 PHE A 110 0 SHEET 2 AA5 2 ARG A 170 THR A 171 -1 O ARG A 170 N PHE A 110 SHEET 1 AA6 4 ILE B 111 VAL B 117 0 SHEET 2 AA6 4 GLY B 208 THR B 219 -1 O PHE B 210 N ASN B 115 SHEET 3 AA6 4 ARG B 152 PRO B 161 -1 N ARG B 152 O THR B 219 SHEET 4 AA6 4 ILE B 175 ASP B 180 -1 O CYS B 179 N LEU B 155 SHEET 1 AA7 3 ARG B 200 LYS B 201 0 SHEET 2 AA7 3 TYR B 134 ARG B 136 -1 N PHE B 135 O ARG B 200 SHEET 3 AA7 3 ARG B 241 PHE B 242 -1 O ARG B 241 N ARG B 136 SHEET 1 AA8 2 GLN C 70 THR C 74 0 SHEET 2 AA8 2 THR C 77 THR C 81 -1 O ASN C 79 N THR C 72 SHEET 1 AA9 4 VAL C 119 TRP C 126 0 SHEET 2 AA9 4 VAL C 261 GLN C 271 -1 O VAL C 263 N HIS C 124 SHEET 3 AA9 4 GLY C 166 VAL C 173 -1 N GLN C 172 O THR C 264 SHEET 4 AA9 4 GLN C 219 ILE C 224 -1 O ILE C 224 N PHE C 167 SHEET 1 AB1 4 GLN C 135 LEU C 141 0 SHEET 2 AB1 4 GLY C 241 SER C 252 -1 O VAL C 245 N ILE C 136 SHEET 3 AB1 4 ALA C 180 GLU C 188 -1 N GLU C 188 O GLN C 242 SHEET 4 AB1 4 HIS C 209 ASN C 213 -1 O MET C 212 N ALA C 183 SHEET 1 AB2 2 ALA C 162 VAL C 163 0 SHEET 2 AB2 2 VAL C 233 LYS C 234 -1 O VAL C 233 N VAL C 163 CISPEP 1 GLY A 40 PRO A 41 0 -0.13 CISPEP 2 GLY C 33 ASN C 34 0 -3.57 CISPEP 3 LEU C 141 PRO C 142 0 -0.09 CRYST1 399.500 399.500 332.860 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.002503 0.001445 0.000000 0.00000 SCALE2 0.000000 0.002890 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003004 0.00000 MASTER 657 0 0 18 40 0 0 6 0 0 0 62 END