HEADER HYDROLASE/INHIBITOR 13-JUL-16 5KV8 TITLE CRYSTAL STRUCTURE OF A HPIV HAEMAGGLUTININ-NEURAMINIDASE-INHIBITOR TITLE 2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ-NEURAMINIDASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.2.1.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN PARAINFLUENZA VIRUS 3; SOURCE 3 ORGANISM_TAXID: 11216; SOURCE 4 ATCC: VR-93; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: SF9 CELLS KEYWDS HAEMAGGLUTININ-NEURAMINIDASE, HYDROLASE, VIRAL PROTEIN, HOST CELL KEYWDS 2 SURFACE RECEPTOR BINDING, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.DIRR,I.M.EL-DEEB,L.M.G.CHAVAS,P.GUILLON,M.VON ITZSTEIN REVDAT 5 29-JUL-20 5KV8 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE ATOM REVDAT 4 22-APR-20 5KV8 1 COMPND REMARK HET HETNAM REVDAT 4 2 1 SITE ATOM REVDAT 3 01-JAN-20 5KV8 1 REMARK REVDAT 2 27-SEP-17 5KV8 1 REMARK REVDAT 1 12-JUL-17 5KV8 0 JRNL AUTH L.DIRR,I.M.EL-DEEB,L.M.G.CHAVAS,P.GUILLON,M.V.ITZSTEIN JRNL TITL THE IMPACT OF THE BUTTERFLY EFFECT ON HUMAN PARAINFLUENZA JRNL TITL 2 VIRUS HAEMAGGLUTININ-NEURAMINIDASE INHIBITOR DESIGN. JRNL REF SCI REP V. 7 4507 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28674426 JRNL DOI 10.1038/S41598-017-04656-Y REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.920 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 61585 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 6008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.7964 - 6.0510 1.00 3717 193 0.1766 0.1924 REMARK 3 2 6.0510 - 4.8045 1.00 3748 181 0.1446 0.1768 REMARK 3 3 4.8045 - 4.1977 1.00 3692 224 0.1242 0.1505 REMARK 3 4 4.1977 - 3.8141 1.00 3754 163 0.1358 0.1472 REMARK 3 5 3.8141 - 3.5408 1.00 3709 214 0.1391 0.1757 REMARK 3 6 3.5408 - 3.3321 1.00 3712 220 0.1407 0.1700 REMARK 3 7 3.3321 - 3.1653 1.00 3708 183 0.1471 0.1955 REMARK 3 8 3.1653 - 3.0276 1.00 3763 204 0.1469 0.1926 REMARK 3 9 3.0276 - 2.9110 1.00 3704 194 0.1550 0.2044 REMARK 3 10 2.9110 - 2.8106 1.00 3707 194 0.1481 0.1859 REMARK 3 11 2.8106 - 2.7227 1.00 3701 207 0.1537 0.1932 REMARK 3 12 2.7227 - 2.6449 1.00 3718 211 0.1555 0.2077 REMARK 3 13 2.6449 - 2.5753 1.00 3744 208 0.1605 0.1957 REMARK 3 14 2.5753 - 2.5124 1.00 3695 221 0.1595 0.1710 REMARK 3 15 2.5124 - 2.4553 1.00 3688 220 0.1645 0.2386 REMARK 3 16 2.4553 - 2.4031 1.00 3732 202 0.1727 0.2016 REMARK 3 17 2.4031 - 2.3550 1.00 3722 193 0.1756 0.2491 REMARK 3 18 2.3550 - 2.3106 1.00 3724 185 0.1801 0.2571 REMARK 3 19 2.3106 - 2.2693 1.00 3710 204 0.1814 0.2580 REMARK 3 20 2.2693 - 2.2308 1.00 3753 200 0.1841 0.2143 REMARK 3 21 2.2308 - 2.1949 1.00 3701 158 0.1833 0.2421 REMARK 3 22 2.1949 - 2.1611 1.00 3751 189 0.1894 0.2519 REMARK 3 23 2.1611 - 2.1293 1.00 3798 169 0.1955 0.2491 REMARK 3 24 2.1293 - 2.0993 1.00 3670 209 0.1944 0.2443 REMARK 3 25 2.0993 - 2.0710 1.00 3781 199 0.2000 0.2385 REMARK 3 26 2.0710 - 2.0441 1.00 3684 214 0.2145 0.2867 REMARK 3 27 2.0441 - 2.0185 1.00 3742 221 0.2161 0.2573 REMARK 3 28 2.0185 - 1.9942 1.00 3625 217 0.2197 0.2703 REMARK 3 29 1.9942 - 1.9710 1.00 3715 236 0.2450 0.2821 REMARK 3 30 1.9710 - 1.9488 0.98 3699 175 0.2635 0.3035 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7131 REMARK 3 ANGLE : 1.223 9690 REMARK 3 CHIRALITY : 0.053 1122 REMARK 3 PLANARITY : 0.005 1211 REMARK 3 DIHEDRAL : 13.766 2624 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5KV8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1000217130. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.6 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61585 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.949 REMARK 200 RESOLUTION RANGE LOW (A) : 45.784 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.79300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.5 REMARK 200 STARTING MODEL: 4XJQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRATE BUFFER, 0.2 M AMMONIUM REMARK 280 SULPHATE, 20% PEG 3000, PH 4.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.78500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.69300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.30600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.69300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.78500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.30600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 142 REMARK 465 HIS A 573 REMARK 465 HIS A 574 REMARK 465 HIS A 575 REMARK 465 HIS A 576 REMARK 465 HIS A 577 REMARK 465 HIS A 578 REMARK 465 THR B 160 REMARK 465 SER B 161 REMARK 465 LYS B 386 REMARK 465 GLY B 387 REMARK 465 LEU B 388 REMARK 465 ASN B 389 REMARK 465 SER B 572 REMARK 465 HIS B 573 REMARK 465 HIS B 574 REMARK 465 HIS B 575 REMARK 465 HIS B 576 REMARK 465 HIS B 577 REMARK 465 HIS B 578 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1005 O HOH A 1043 1.90 REMARK 500 O LEU A 555 O HOH A 701 1.92 REMARK 500 O HOH B 937 O HOH B 970 1.93 REMARK 500 OG SER A 554 O4 SO4 B 610 1.99 REMARK 500 OG SER A 195 O HOH A 702 2.00 REMARK 500 O HOH B 879 O HOH B 983 2.02 REMARK 500 N THR A 143 O HOH A 703 2.09 REMARK 500 OH TYR A 405 O HOH A 704 2.09 REMARK 500 O3 NDG B 601 O HOH B 701 2.10 REMARK 500 O HOH A 899 O HOH A 1046 2.12 REMARK 500 O6 NDG B 603 O HOH B 702 2.13 REMARK 500 NE2 GLN B 215 O HOH B 703 2.15 REMARK 500 O HOH A 1022 O HOH A 1038 2.16 REMARK 500 OE2 GLU A 549 O HOH A 705 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 273 O6 NDG B 602 2544 2.18 REMARK 500 OE1 GLN B 215 OG SER B 390 4545 2.18 REMARK 500 O HOH A 972 O HOH A 994 2554 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 180 61.33 -112.99 REMARK 500 ASN A 199 -168.01 -121.82 REMARK 500 ASN A 262 -107.21 53.49 REMARK 500 VAL A 322 -54.38 75.65 REMARK 500 TYR A 405 -179.07 -69.23 REMARK 500 TRP A 406 123.09 -35.85 REMARK 500 SER A 427 -148.90 -126.33 REMARK 500 SER A 456 -148.02 -145.76 REMARK 500 SER A 468 18.07 -147.28 REMARK 500 THR A 475 -148.51 -167.42 REMARK 500 LYS A 500 34.94 -154.01 REMARK 500 ARG A 522 -94.84 -151.12 REMARK 500 ASN A 523 -153.78 -170.15 REMARK 500 TYR A 539 -113.08 54.84 REMARK 500 HIS B 144 150.63 -47.94 REMARK 500 LEU B 180 68.75 -101.75 REMARK 500 ASN B 199 -162.86 -122.61 REMARK 500 ASN B 262 -106.32 53.66 REMARK 500 VAL B 322 -53.24 72.66 REMARK 500 TYR B 405 -179.84 -68.13 REMARK 500 TRP B 406 122.25 -33.94 REMARK 500 GLU B 409 153.75 -48.74 REMARK 500 SER B 427 -148.50 -127.62 REMARK 500 ASP B 444 59.04 -140.23 REMARK 500 SER B 456 -146.46 -148.96 REMARK 500 TRP B 465 129.38 -38.28 REMARK 500 SER B 468 13.22 -146.27 REMARK 500 THR B 475 -145.84 -169.09 REMARK 500 LYS B 500 31.81 -150.59 REMARK 500 ARG B 522 -93.95 -152.28 REMARK 500 ASN B 523 -159.22 -171.51 REMARK 500 TYR B 539 -112.29 53.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NDG A 601 REMARK 610 NDG A 602 REMARK 610 NDG A 603 REMARK 610 BMA A 604 REMARK 610 NDG A 610 REMARK 610 NDG B 601 REMARK 610 NDG B 602 REMARK 610 NDG B 603 REMARK 610 BMA B 604 REMARK 610 NDG B 611 REMARK 610 MAN B 612 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 605 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 279 O REMARK 620 2 ASP A 279 OD1 74.7 REMARK 620 3 SER A 282 O 80.4 153.1 REMARK 620 4 SER A 282 OG 79.4 112.8 71.5 REMARK 620 5 GLY A 284 O 153.7 112.6 86.0 117.3 REMARK 620 6 ALA A 316 O 79.7 81.2 84.7 150.5 76.7 REMARK 620 7 HOH A 735 O 129.9 77.2 127.9 74.5 76.0 135.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 605 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 279 O REMARK 620 2 ASP B 279 OD1 73.9 REMARK 620 3 SER B 282 O 76.9 149.2 REMARK 620 4 SER B 282 OG 74.5 112.2 68.3 REMARK 620 5 GLY B 284 O 156.4 116.6 87.5 116.2 REMARK 620 6 ALA B 316 O 77.2 80.7 83.5 143.7 83.6 REMARK 620 7 HOH B 738 O 124.1 77.7 128.2 73.2 79.5 142.8 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4XJQ RELATED DB: PDB REMARK 900 4XJQ CONTAINS THE SAME PROTEIN AS APO FORM. REMARK 900 RELATED ID: 4XJR RELATED DB: PDB REMARK 900 4XJR CONTAINS THE SAME PROTEIN COMPLEXED WITH OEL. REMARK 900 RELATED ID: 5KV9 RELATED DB: PDB DBREF 5KV8 A 142 572 UNP G8G134 G8G134_9PARA 142 572 DBREF 5KV8 B 142 572 UNP G8G134 G8G134_9PARA 142 572 SEQADV 5KV8 HIS A 573 UNP G8G134 EXPRESSION TAG SEQADV 5KV8 HIS A 574 UNP G8G134 EXPRESSION TAG SEQADV 5KV8 HIS A 575 UNP G8G134 EXPRESSION TAG SEQADV 5KV8 HIS A 576 UNP G8G134 EXPRESSION TAG SEQADV 5KV8 HIS A 577 UNP G8G134 EXPRESSION TAG SEQADV 5KV8 HIS A 578 UNP G8G134 EXPRESSION TAG SEQADV 5KV8 HIS B 573 UNP G8G134 EXPRESSION TAG SEQADV 5KV8 HIS B 574 UNP G8G134 EXPRESSION TAG SEQADV 5KV8 HIS B 575 UNP G8G134 EXPRESSION TAG SEQADV 5KV8 HIS B 576 UNP G8G134 EXPRESSION TAG SEQADV 5KV8 HIS B 577 UNP G8G134 EXPRESSION TAG SEQADV 5KV8 HIS B 578 UNP G8G134 EXPRESSION TAG SEQRES 1 A 437 ILE THR HIS ASP VAL GLY ILE LYS PRO LEU ASN PRO ASP SEQRES 2 A 437 ASP PHE TRP ARG CYS THR SER GLY LEU PRO SER LEU MET SEQRES 3 A 437 LYS THR PRO LYS ILE ARG LEU MET PRO GLY PRO GLY LEU SEQRES 4 A 437 LEU ALA MET PRO THR THR VAL ASP GLY CYS VAL ARG THR SEQRES 5 A 437 PRO SER LEU VAL ILE ASN ASP LEU ILE TYR ALA TYR THR SEQRES 6 A 437 SER ASN LEU ILE THR ARG GLY CYS GLN ASP ILE GLY LYS SEQRES 7 A 437 SER TYR GLN VAL LEU GLN ILE GLY ILE ILE THR VAL ASN SEQRES 8 A 437 SER ASP LEU VAL PRO ASP LEU ASN PRO ARG ILE SER HIS SEQRES 9 A 437 THR PHE ASN ILE ASN ASP ASN ARG LYS SER CYS SER LEU SEQRES 10 A 437 ALA LEU LEU ASN THR ASP VAL TYR GLN LEU CYS SER THR SEQRES 11 A 437 PRO LYS VAL ASP GLU ARG SER ASP TYR ALA SER SER GLY SEQRES 12 A 437 ILE GLU ASP ILE VAL LEU ASP ILE VAL ASN HIS ASP GLY SEQRES 13 A 437 SER ILE SER THR THR ARG PHE LYS ASN ASN ASN ILE SER SEQRES 14 A 437 PHE ASP GLN PRO TYR ALA ALA LEU TYR PRO SER VAL GLY SEQRES 15 A 437 PRO GLY ILE TYR TYR LYS GLY LYS ILE ILE PHE LEU GLY SEQRES 16 A 437 TYR GLY GLY LEU GLU HIS PRO ILE ASN GLU ASN ALA ILE SEQRES 17 A 437 CYS ASN THR THR GLY CYS PRO GLY LYS THR GLN ARG ASP SEQRES 18 A 437 CYS ASN GLN ALA SER HIS SER PRO TRP PHE SER ASP ARG SEQRES 19 A 437 ARG MET VAL ASN SER ILE ILE VAL VAL ASP LYS GLY LEU SEQRES 20 A 437 ASN SER ILE PRO LYS LEU LYS VAL TRP THR ILE SER MET SEQRES 21 A 437 ARG GLN ASN TYR TRP GLY SER GLU GLY ARG LEU LEU LEU SEQRES 22 A 437 LEU GLY ASN LYS ILE TYR ILE TYR THR ARG SER THR SER SEQRES 23 A 437 TRP HIS SER LYS LEU GLN LEU GLY ILE ILE ASP ILE THR SEQRES 24 A 437 ASP TYR SER ASP ILE ARG ILE LYS TRP THR TRP HIS ASN SEQRES 25 A 437 VAL LEU SER ARG PRO GLY ASN ASN GLU CYS PRO TRP GLY SEQRES 26 A 437 HIS SER CYS PRO ASP GLY CYS ILE THR GLY VAL TYR THR SEQRES 27 A 437 ASP ALA TYR PRO LEU ASN PRO THR GLY SER ILE VAL SER SEQRES 28 A 437 SER VAL ILE LEU ASP SER GLN LYS SER ARG VAL ASN PRO SEQRES 29 A 437 VAL ILE THR TYR SER THR ALA THR GLU ARG VAL ASN GLU SEQRES 30 A 437 LEU ALA ILE ARG ASN LYS THR LEU SER ALA GLY TYR THR SEQRES 31 A 437 THR THR SER CYS ILE THR HIS TYR ASN LYS GLY TYR CYS SEQRES 32 A 437 PHE HIS ILE VAL GLU ILE ASN HIS LYS SER LEU ASP THR SEQRES 33 A 437 PHE GLN PRO MET LEU PHE LYS THR GLU ILE PRO LYS SER SEQRES 34 A 437 CYS SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 437 ILE THR HIS ASP VAL GLY ILE LYS PRO LEU ASN PRO ASP SEQRES 2 B 437 ASP PHE TRP ARG CYS THR SER GLY LEU PRO SER LEU MET SEQRES 3 B 437 LYS THR PRO LYS ILE ARG LEU MET PRO GLY PRO GLY LEU SEQRES 4 B 437 LEU ALA MET PRO THR THR VAL ASP GLY CYS VAL ARG THR SEQRES 5 B 437 PRO SER LEU VAL ILE ASN ASP LEU ILE TYR ALA TYR THR SEQRES 6 B 437 SER ASN LEU ILE THR ARG GLY CYS GLN ASP ILE GLY LYS SEQRES 7 B 437 SER TYR GLN VAL LEU GLN ILE GLY ILE ILE THR VAL ASN SEQRES 8 B 437 SER ASP LEU VAL PRO ASP LEU ASN PRO ARG ILE SER HIS SEQRES 9 B 437 THR PHE ASN ILE ASN ASP ASN ARG LYS SER CYS SER LEU SEQRES 10 B 437 ALA LEU LEU ASN THR ASP VAL TYR GLN LEU CYS SER THR SEQRES 11 B 437 PRO LYS VAL ASP GLU ARG SER ASP TYR ALA SER SER GLY SEQRES 12 B 437 ILE GLU ASP ILE VAL LEU ASP ILE VAL ASN HIS ASP GLY SEQRES 13 B 437 SER ILE SER THR THR ARG PHE LYS ASN ASN ASN ILE SER SEQRES 14 B 437 PHE ASP GLN PRO TYR ALA ALA LEU TYR PRO SER VAL GLY SEQRES 15 B 437 PRO GLY ILE TYR TYR LYS GLY LYS ILE ILE PHE LEU GLY SEQRES 16 B 437 TYR GLY GLY LEU GLU HIS PRO ILE ASN GLU ASN ALA ILE SEQRES 17 B 437 CYS ASN THR THR GLY CYS PRO GLY LYS THR GLN ARG ASP SEQRES 18 B 437 CYS ASN GLN ALA SER HIS SER PRO TRP PHE SER ASP ARG SEQRES 19 B 437 ARG MET VAL ASN SER ILE ILE VAL VAL ASP LYS GLY LEU SEQRES 20 B 437 ASN SER ILE PRO LYS LEU LYS VAL TRP THR ILE SER MET SEQRES 21 B 437 ARG GLN ASN TYR TRP GLY SER GLU GLY ARG LEU LEU LEU SEQRES 22 B 437 LEU GLY ASN LYS ILE TYR ILE TYR THR ARG SER THR SER SEQRES 23 B 437 TRP HIS SER LYS LEU GLN LEU GLY ILE ILE ASP ILE THR SEQRES 24 B 437 ASP TYR SER ASP ILE ARG ILE LYS TRP THR TRP HIS ASN SEQRES 25 B 437 VAL LEU SER ARG PRO GLY ASN ASN GLU CYS PRO TRP GLY SEQRES 26 B 437 HIS SER CYS PRO ASP GLY CYS ILE THR GLY VAL TYR THR SEQRES 27 B 437 ASP ALA TYR PRO LEU ASN PRO THR GLY SER ILE VAL SER SEQRES 28 B 437 SER VAL ILE LEU ASP SER GLN LYS SER ARG VAL ASN PRO SEQRES 29 B 437 VAL ILE THR TYR SER THR ALA THR GLU ARG VAL ASN GLU SEQRES 30 B 437 LEU ALA ILE ARG ASN LYS THR LEU SER ALA GLY TYR THR SEQRES 31 B 437 THR THR SER CYS ILE THR HIS TYR ASN LYS GLY TYR CYS SEQRES 32 B 437 PHE HIS ILE VAL GLU ILE ASN HIS LYS SER LEU ASP THR SEQRES 33 B 437 PHE GLN PRO MET LEU PHE LYS THR GLU ILE PRO LYS SER SEQRES 34 B 437 CYS SER HIS HIS HIS HIS HIS HIS HET NDG A 601 14 HET NDG A 602 14 HET NDG A 603 14 HET BMA A 604 11 HET CA A 605 1 HET 6Y6 A 606 29 HET EDO A 607 4 HET EDO A 608 4 HET EDO A 609 4 HET NDG A 610 14 HET CIT A 611 13 HET NDG B 601 14 HET NDG B 602 14 HET NDG B 603 14 HET BMA B 604 11 HET CA B 605 1 HET 6Y6 B 606 29 HET EDO B 607 4 HET EDO B 608 4 HET EDO B 609 4 HET SO4 B 610 5 HET NDG B 611 14 HET MAN B 612 11 HET GOL B 613 6 HETNAM NDG 2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM CA CALCIUM ION HETNAM 6Y6 2,6-ANHYDRO-3,4,5-TRIDEOXY-4-[4-(METHOXYMETHYL)-1H-1,2, HETNAM 2 6Y6 3-TRIAZOL-1-YL]-5-[(2-METHYLPROPANOYL)AMINO]-D- HETNAM 3 6Y6 GLYCERO-D-GALACTO -NON-2-ENONIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM CIT CITRIC ACID HETNAM SO4 SULFATE ION HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NDG 8(C8 H15 N O6) FORMUL 6 BMA 2(C6 H12 O6) FORMUL 7 CA 2(CA 2+) FORMUL 8 6Y6 2(C17 H26 N4 O8) FORMUL 9 EDO 6(C2 H6 O2) FORMUL 13 CIT C6 H8 O7 FORMUL 23 SO4 O4 S 2- FORMUL 25 MAN C6 H12 O6 FORMUL 26 GOL C3 H8 O3 FORMUL 27 HOH *645(H2 O) HELIX 1 AA1 ASN A 152 TRP A 157 1 6 HELIX 2 AA2 ASP A 275 SER A 282 1 8 HELIX 3 AA3 LYS A 305 ILE A 309 5 5 HELIX 4 AA4 THR A 359 SER A 367 1 9 HELIX 5 AA5 HIS A 368 SER A 373 5 6 HELIX 6 AA6 LEU A 388 SER A 390 5 3 HELIX 7 AA7 ASN B 152 TRP B 157 1 6 HELIX 8 AA8 ASP B 275 SER B 282 1 8 HELIX 9 AA9 LYS B 305 ILE B 309 5 5 HELIX 10 AB1 THR B 359 ALA B 366 1 8 HELIX 11 AB2 SER B 367 HIS B 368 5 2 HELIX 12 AB3 SER B 369 SER B 373 5 5 SHEET 1 AA1 4 ILE A 148 PRO A 150 0 SHEET 2 AA1 4 ALA A 528 HIS A 538 -1 O THR A 537 N LYS A 149 SHEET 3 AA1 4 LYS A 541 HIS A 552 -1 O ILE A 547 N THR A 532 SHEET 4 AA1 4 THR A 557 GLU A 566 -1 O PHE A 563 N HIS A 546 SHEET 1 AA2 2 LEU A 163 LEU A 166 0 SHEET 2 AA2 2 LYS A 569 SER A 572 -1 O SER A 572 N LEU A 163 SHEET 1 AA3 4 CYS A 190 ILE A 198 0 SHEET 2 AA3 4 TYR A 203 ILE A 210 -1 O ILE A 210 N CYS A 190 SHEET 3 AA3 4 TYR A 221 VAL A 231 -1 O GLN A 225 N TYR A 205 SHEET 4 AA3 4 PRO A 237 PHE A 247 -1 O PHE A 247 N GLN A 222 SHEET 1 AA4 4 LYS A 254 LEU A 261 0 SHEET 2 AA4 4 ASP A 264 SER A 270 -1 O TYR A 266 N ALA A 259 SHEET 3 AA4 4 ILE A 288 VAL A 293 -1 O VAL A 289 N CYS A 269 SHEET 4 AA4 4 ILE A 299 PHE A 304 -1 O PHE A 304 N ILE A 288 SHEET 1 AA5 5 SER A 310 PHE A 311 0 SHEET 2 AA5 5 PRO A 392 THR A 398 1 O VAL A 396 N SER A 310 SHEET 3 AA5 5 MET A 377 LYS A 386 -1 N VAL A 383 O LYS A 395 SHEET 4 AA5 5 LYS A 331 LEU A 340 -1 N PHE A 334 O ILE A 382 SHEET 5 AA5 5 TYR A 315 PRO A 320 -1 N ALA A 316 O GLY A 339 SHEET 1 AA6 5 SER A 310 PHE A 311 0 SHEET 2 AA6 5 PRO A 392 THR A 398 1 O VAL A 396 N SER A 310 SHEET 3 AA6 5 MET A 377 LYS A 386 -1 N VAL A 383 O LYS A 395 SHEET 4 AA6 5 LYS A 331 LEU A 340 -1 N PHE A 334 O ILE A 382 SHEET 5 AA6 5 ILE A 326 TYR A 328 -1 N TYR A 328 O LYS A 331 SHEET 1 AA7 4 GLY A 410 LEU A 415 0 SHEET 2 AA7 4 LYS A 418 THR A 423 -1 O TYR A 420 N LEU A 413 SHEET 3 AA7 4 GLN A 433 ASP A 438 -1 O GLY A 435 N ILE A 421 SHEET 4 AA7 4 ARG A 446 TRP A 449 -1 O ARG A 446 N ASP A 438 SHEET 1 AA8 4 ALA A 481 PRO A 483 0 SHEET 2 AA8 4 VAL A 491 LEU A 496 -1 O SER A 492 N TYR A 482 SHEET 3 AA8 4 PRO A 505 SER A 510 -1 O THR A 508 N SER A 493 SHEET 4 AA8 4 ARG A 515 ALA A 520 -1 O LEU A 519 N ILE A 507 SHEET 1 AA9 4 ILE B 148 PRO B 150 0 SHEET 2 AA9 4 ALA B 528 HIS B 538 -1 O THR B 537 N LYS B 149 SHEET 3 AA9 4 LYS B 541 HIS B 552 -1 O TYR B 543 N ILE B 536 SHEET 4 AA9 4 THR B 557 GLU B 566 -1 O PHE B 563 N HIS B 546 SHEET 1 AB1 2 SER B 165 LEU B 166 0 SHEET 2 AB1 2 LYS B 569 SER B 570 -1 O SER B 570 N SER B 165 SHEET 1 AB2 4 CYS B 190 ILE B 198 0 SHEET 2 AB2 4 TYR B 203 ILE B 210 -1 O ASN B 208 N ARG B 192 SHEET 3 AB2 4 TYR B 221 VAL B 231 -1 O GLN B 225 N TYR B 205 SHEET 4 AB2 4 PRO B 237 PHE B 247 -1 O ASP B 238 N THR B 230 SHEET 1 AB3 4 LYS B 254 LEU B 261 0 SHEET 2 AB3 4 ASP B 264 SER B 270 -1 O TYR B 266 N ALA B 259 SHEET 3 AB3 4 ILE B 288 VAL B 293 -1 O ASP B 291 N GLN B 267 SHEET 4 AB3 4 ILE B 299 PHE B 304 -1 O PHE B 304 N ILE B 288 SHEET 1 AB4 5 SER B 310 PHE B 311 0 SHEET 2 AB4 5 LYS B 393 THR B 398 1 O VAL B 396 N SER B 310 SHEET 3 AB4 5 MET B 377 ASP B 385 -1 N VAL B 383 O LYS B 395 SHEET 4 AB4 5 LYS B 331 LEU B 340 -1 N PHE B 334 O ILE B 382 SHEET 5 AB4 5 TYR B 315 PRO B 320 -1 N TYR B 319 O TYR B 337 SHEET 1 AB5 5 SER B 310 PHE B 311 0 SHEET 2 AB5 5 LYS B 393 THR B 398 1 O VAL B 396 N SER B 310 SHEET 3 AB5 5 MET B 377 ASP B 385 -1 N VAL B 383 O LYS B 395 SHEET 4 AB5 5 LYS B 331 LEU B 340 -1 N PHE B 334 O ILE B 382 SHEET 5 AB5 5 ILE B 326 TYR B 328 -1 N TYR B 328 O LYS B 331 SHEET 1 AB6 4 GLY B 410 LEU B 415 0 SHEET 2 AB6 4 LYS B 418 THR B 423 -1 O TYR B 420 N LEU B 413 SHEET 3 AB6 4 GLN B 433 ASP B 438 -1 O GLY B 435 N ILE B 421 SHEET 4 AB6 4 ARG B 446 TRP B 449 -1 O ARG B 446 N ASP B 438 SHEET 1 AB7 4 ALA B 481 PRO B 483 0 SHEET 2 AB7 4 ILE B 490 LEU B 496 -1 O SER B 492 N TYR B 482 SHEET 3 AB7 4 PRO B 505 THR B 511 -1 O THR B 508 N SER B 493 SHEET 4 AB7 4 ARG B 515 ALA B 520 -1 O LEU B 519 N ILE B 507 SSBOND 1 CYS A 159 CYS A 571 1555 1555 2.02 SSBOND 2 CYS A 190 CYS A 214 1555 1555 2.05 SSBOND 3 CYS A 256 CYS A 269 1555 1555 2.04 SSBOND 4 CYS A 350 CYS A 363 1555 1555 2.02 SSBOND 5 CYS A 355 CYS A 469 1555 1555 2.03 SSBOND 6 CYS A 463 CYS A 473 1555 1555 2.05 SSBOND 7 CYS A 535 CYS A 544 1555 1555 2.05 SSBOND 8 CYS B 159 CYS B 571 1555 1555 2.01 SSBOND 9 CYS B 190 CYS B 214 1555 1555 2.03 SSBOND 10 CYS B 256 CYS B 269 1555 1555 2.05 SSBOND 11 CYS B 350 CYS B 363 1555 1555 2.02 SSBOND 12 CYS B 355 CYS B 469 1555 1555 2.03 SSBOND 13 CYS B 463 CYS B 473 1555 1555 2.05 SSBOND 14 CYS B 535 CYS B 544 1555 1555 2.05 LINK O ASP A 279 CA CA A 605 1555 1555 2.27 LINK OD1 ASP A 279 CA CA A 605 1555 1555 2.43 LINK O SER A 282 CA CA A 605 1555 1555 2.37 LINK OG SER A 282 CA CA A 605 1555 1555 2.56 LINK O GLY A 284 CA CA A 605 1555 1555 2.39 LINK O ALA A 316 CA CA A 605 1555 1555 2.36 LINK CA CA A 605 O HOH A 735 1555 1555 2.57 LINK O ASP B 279 CA CA B 605 1555 1555 2.43 LINK OD1 ASP B 279 CA CA B 605 1555 1555 2.44 LINK O SER B 282 CA CA B 605 1555 1555 2.45 LINK OG SER B 282 CA CA B 605 1555 1555 2.65 LINK O GLY B 284 CA CA B 605 1555 1555 2.30 LINK O ALA B 316 CA CA B 605 1555 1555 2.27 LINK CA CA B 605 O HOH B 738 1555 1555 2.35 CISPEP 1 THR A 169 PRO A 170 0 -4.44 CISPEP 2 THR B 169 PRO B 170 0 -7.05 CRYST1 81.570 98.612 103.386 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012259 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010141 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009672 0.00000 MASTER 406 0 24 12 64 0 0 6 0 0 0 68 END