HEADER METAL BINDING PROTEIN 26-MAY-16 5K7J TITLE STRUCTURE OF DESIGNED ZINC BINDING PROTEIN ZE2 BOUND TO ZN2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: IGPS; COMPND 5 EC: 4.1.1.48; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: COMPUTATIONALLY DESIGNED ZINC BINDING PROTEIN USING COMPND 8 PDB ID 1A53 AS A STARTING SCAFFOLD. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS (STRAIN ATCC 35092 / SOURCE 3 DSM 1617 / JCM 11322 / P2); SOURCE 4 ORGANISM_TAXID: 273057; SOURCE 5 STRAIN: ATCC 35092 / DSM 1617 / JCM 11322 / P2; SOURCE 6 GENE: TRPC, SSO0895; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PQE-MBP KEYWDS METALLOPROTEIN, DESIGNED, TIM BARREL, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.L.GUFFY,B.S.DER,B.KUHLMAN REVDAT 5 27-NOV-19 5K7J 1 REMARK REVDAT 4 01-NOV-17 5K7J 1 REMARK REVDAT 3 06-SEP-17 5K7J 1 REMARK REVDAT 2 10-AUG-16 5K7J 1 JRNL REVDAT 1 03-AUG-16 5K7J 0 JRNL AUTH S.L.GUFFY,B.S.DER,B.KUHLMAN JRNL TITL PROBING THE MINIMAL DETERMINANTS OF ZINC BINDING WITH JRNL TITL 2 COMPUTATIONAL PROTEIN DESIGN. JRNL REF PROTEIN ENG.DES.SEL. V. 29 327 2016 JRNL REFN ESSN 1741-0134 JRNL PMID 27358168 JRNL DOI 10.1093/PROTEIN/GZW026 REMARK 2 REMARK 2 RESOLUTION. 1.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 86360 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4579 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.39 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3333 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 50.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2490 REMARK 3 BIN FREE R VALUE SET COUNT : 215 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3866 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 131 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.068 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.072 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.044 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.071 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3976 ; 0.025 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5359 ; 2.403 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 494 ; 6.234 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;38.677 ;23.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 774 ;14.130 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;21.143 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 613 ; 0.160 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2919 ; 0.015 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1946 ; 2.238 ; 1.787 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2426 ; 3.211 ; 2.660 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2030 ; 3.671 ; 2.192 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5K7J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221824. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.07426 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91000 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.390 REMARK 200 RESOLUTION RANGE LOW (A) : 73.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 8.300 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.90600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4, PHASER REMARK 200 STARTING MODEL: 1A53 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.10 M SUCCINATE 22% PEG 3350, PH 7, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.51450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MONOMER DETERMINED BY SIZE EXCLUSION CHROMATOGRAPHY REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 ALA A 181 REMARK 465 ASP A 182 REMARK 465 GLU A 184 REMARK 465 THR A 185 REMARK 465 LEU A 186 REMARK 465 GLU A 187 REMARK 465 ILE A 188 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 ALA B 181 REMARK 465 GLU B 187 REMARK 465 ILE B 188 REMARK 465 SER B 202 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 22 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 139 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 214 CG CD OE1 OE2 REMARK 470 GLU A 219 CG CD OE1 OE2 REMARK 470 ARG B 2 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 184 CG CD OE1 OE2 REMARK 470 THR B 185 OG1 CG2 REMARK 470 GLU B 219 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 146 CD GLU B 146 OE1 0.086 REMARK 500 GLU B 146 CD GLU B 146 OE2 0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 10 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG A 27 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 27 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG A 53 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 LYS A 54 CD - CE - NZ ANGL. DEV. = 23.1 DEGREES REMARK 500 ARG A 74 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 96 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 MET A 153 CG - SD - CE ANGL. DEV. = -20.7 DEGREES REMARK 500 PHE A 175 CB - CG - CD1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG B 35 NE - CZ - NH2 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG B 53 NE - CZ - NH1 ANGL. DEV. = -7.2 DEGREES REMARK 500 ARG B 53 NE - CZ - NH2 ANGL. DEV. = 9.7 DEGREES REMARK 500 MET B 153 CG - SD - CE ANGL. DEV. = -22.9 DEGREES REMARK 500 PHE B 175 CB - CG - CD2 ANGL. DEV. = -5.2 DEGREES REMARK 500 PHE B 229 CB - CG - CD2 ANGL. DEV. = -4.5 DEGREES REMARK 500 LEU B 230 CB - CG - CD1 ANGL. DEV. = 19.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 210 -174.63 66.63 REMARK 500 TYR B 75 -40.20 -134.06 REMARK 500 THR B 185 48.43 -142.32 REMARK 500 HIS B 210 -173.39 69.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 179 NE2 REMARK 620 2 HIS A 183 NE2 93.3 REMARK 620 3 HIS A 210 ND1 112.6 100.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 179 NE2 REMARK 620 2 HIS B 183 NE2 108.4 REMARK 620 3 HIS B 210 ND1 109.2 105.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 301 DBREF 5K7J A 1 247 UNP Q06121 TRPC_SULSO 2 248 DBREF 5K7J B 1 247 UNP Q06121 TRPC_SULSO 2 248 SEQADV 5K7J GLY A -1 UNP Q06121 EXPRESSION TAG SEQADV 5K7J SER A 0 UNP Q06121 EXPRESSION TAG SEQADV 5K7J ALA A 109 UNP Q06121 LYS 110 ENGINEERED MUTATION SEQADV 5K7J GLY A 158 UNP Q06121 GLU 159 ENGINEERED MUTATION SEQADV 5K7J HIS A 179 UNP Q06121 ASN 180 ENGINEERED MUTATION SEQADV 5K7J ALA A 181 UNP Q06121 ARG 182 ENGINEERED MUTATION SEQADV 5K7J HIS A 183 UNP Q06121 LEU 184 ENGINEERED MUTATION SEQADV 5K7J ALA A 209 UNP Q06121 GLU 210 ENGINEERED MUTATION SEQADV 5K7J HIS A 210 UNP Q06121 SER 211 ENGINEERED MUTATION SEQADV 5K7J GLY B -1 UNP Q06121 EXPRESSION TAG SEQADV 5K7J SER B 0 UNP Q06121 EXPRESSION TAG SEQADV 5K7J ALA B 109 UNP Q06121 LYS 110 ENGINEERED MUTATION SEQADV 5K7J GLY B 158 UNP Q06121 GLU 159 ENGINEERED MUTATION SEQADV 5K7J HIS B 179 UNP Q06121 ASN 180 ENGINEERED MUTATION SEQADV 5K7J ALA B 181 UNP Q06121 ARG 182 ENGINEERED MUTATION SEQADV 5K7J HIS B 183 UNP Q06121 LEU 184 ENGINEERED MUTATION SEQADV 5K7J ALA B 209 UNP Q06121 GLU 210 ENGINEERED MUTATION SEQADV 5K7J HIS B 210 UNP Q06121 SER 211 ENGINEERED MUTATION SEQRES 1 A 249 GLY SER PRO ARG TYR LEU LYS GLY TRP LEU LYS ASP VAL SEQRES 2 A 249 VAL GLN LEU SER LEU ARG ARG PRO SER PHE ARG ALA SER SEQRES 3 A 249 ARG GLN ARG PRO ILE ILE SER LEU ASN GLU ARG ILE LEU SEQRES 4 A 249 GLU PHE ASN LYS ARG ASN ILE THR ALA ILE ILE ALA GLU SEQRES 5 A 249 TYR LYS ARG LYS SER PRO SER GLY LEU ASP VAL GLU ARG SEQRES 6 A 249 ASP PRO ILE GLU TYR SER LYS PHE MET GLU ARG TYR ALA SEQRES 7 A 249 VAL GLY LEU SER ILE LEU THR GLU GLU LYS TYR PHE ASN SEQRES 8 A 249 GLY SER TYR GLU THR LEU ARG LYS ILE ALA SER SER VAL SEQRES 9 A 249 SER ILE PRO ILE LEU MET ALA ASP PHE ILE VAL LYS GLU SEQRES 10 A 249 SER GLN ILE ASP ASP ALA TYR ASN LEU GLY ALA ASP THR SEQRES 11 A 249 VAL LEU LEU ILE VAL LYS ILE LEU THR GLU ARG GLU LEU SEQRES 12 A 249 GLU SER LEU LEU GLU TYR ALA ARG SER TYR GLY MET GLU SEQRES 13 A 249 PRO LEU ILE GLY ILE ASN ASP GLU ASN ASP LEU ASP ILE SEQRES 14 A 249 ALA LEU ARG ILE GLY ALA ARG PHE ILE GLY ILE HIS SER SEQRES 15 A 249 ALA ASP HIS GLU THR LEU GLU ILE ASN LYS GLU ASN GLN SEQRES 16 A 249 ARG LYS LEU ILE SER MET ILE PRO SER ASN VAL VAL LYS SEQRES 17 A 249 VAL ALA ALA HIS GLY ILE SER GLU ARG ASN GLU ILE GLU SEQRES 18 A 249 GLU LEU ARG LYS LEU GLY VAL ASN ALA PHE LEU ILE GLY SEQRES 19 A 249 SER SER LEU MET ARG ASN PRO GLU LYS ILE LYS GLU PHE SEQRES 20 A 249 ILE LEU SEQRES 1 B 249 GLY SER PRO ARG TYR LEU LYS GLY TRP LEU LYS ASP VAL SEQRES 2 B 249 VAL GLN LEU SER LEU ARG ARG PRO SER PHE ARG ALA SER SEQRES 3 B 249 ARG GLN ARG PRO ILE ILE SER LEU ASN GLU ARG ILE LEU SEQRES 4 B 249 GLU PHE ASN LYS ARG ASN ILE THR ALA ILE ILE ALA GLU SEQRES 5 B 249 TYR LYS ARG LYS SER PRO SER GLY LEU ASP VAL GLU ARG SEQRES 6 B 249 ASP PRO ILE GLU TYR SER LYS PHE MET GLU ARG TYR ALA SEQRES 7 B 249 VAL GLY LEU SER ILE LEU THR GLU GLU LYS TYR PHE ASN SEQRES 8 B 249 GLY SER TYR GLU THR LEU ARG LYS ILE ALA SER SER VAL SEQRES 9 B 249 SER ILE PRO ILE LEU MET ALA ASP PHE ILE VAL LYS GLU SEQRES 10 B 249 SER GLN ILE ASP ASP ALA TYR ASN LEU GLY ALA ASP THR SEQRES 11 B 249 VAL LEU LEU ILE VAL LYS ILE LEU THR GLU ARG GLU LEU SEQRES 12 B 249 GLU SER LEU LEU GLU TYR ALA ARG SER TYR GLY MET GLU SEQRES 13 B 249 PRO LEU ILE GLY ILE ASN ASP GLU ASN ASP LEU ASP ILE SEQRES 14 B 249 ALA LEU ARG ILE GLY ALA ARG PHE ILE GLY ILE HIS SER SEQRES 15 B 249 ALA ASP HIS GLU THR LEU GLU ILE ASN LYS GLU ASN GLN SEQRES 16 B 249 ARG LYS LEU ILE SER MET ILE PRO SER ASN VAL VAL LYS SEQRES 17 B 249 VAL ALA ALA HIS GLY ILE SER GLU ARG ASN GLU ILE GLU SEQRES 18 B 249 GLU LEU ARG LYS LEU GLY VAL ASN ALA PHE LEU ILE GLY SEQRES 19 B 249 SER SER LEU MET ARG ASN PRO GLU LYS ILE LYS GLU PHE SEQRES 20 B 249 ILE LEU HET ZN A 301 1 HET ZN B 301 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *131(H2 O) HELIX 1 AA1 LYS A 5 ARG A 17 1 13 HELIX 2 AA2 SER A 31 ARG A 42 1 12 HELIX 3 AA3 ASP A 64 ARG A 74 1 11 HELIX 4 AA4 SER A 91 SER A 100 1 10 HELIX 5 AA5 LYS A 114 GLY A 125 1 12 HELIX 6 AA6 LYS A 134 LEU A 136 5 3 HELIX 7 AA7 THR A 137 SER A 150 1 14 HELIX 8 AA8 ASP A 161 ILE A 171 1 11 HELIX 9 AA9 LYS A 190 MET A 199 1 10 HELIX 10 AB1 GLU A 214 LEU A 224 1 11 HELIX 11 AB2 GLY A 232 ASN A 238 1 7 HELIX 12 AB3 GLU A 240 ILE A 246 1 7 HELIX 13 AB4 LYS B 5 ARG B 17 1 13 HELIX 14 AB5 SER B 31 ARG B 42 1 12 HELIX 15 AB6 ASP B 64 ARG B 74 1 11 HELIX 16 AB7 SER B 91 SER B 100 1 10 HELIX 17 AB8 LYS B 114 GLY B 125 1 12 HELIX 18 AB9 LYS B 134 LEU B 136 5 3 HELIX 19 AC1 THR B 137 SER B 150 1 14 HELIX 20 AC2 ASP B 161 ILE B 171 1 11 HELIX 21 AC3 LYS B 190 MET B 199 1 10 HELIX 22 AC4 GLU B 214 LEU B 224 1 11 HELIX 23 AC5 GLY B 232 ASN B 238 1 7 HELIX 24 AC6 GLU B 240 ILE B 246 1 7 SHEET 1 AA1 9 ILE A 47 TYR A 51 0 SHEET 2 AA1 9 GLY A 78 LEU A 82 1 O SER A 80 N TYR A 51 SHEET 3 AA1 9 ILE A 106 ALA A 109 1 O LEU A 107 N LEU A 79 SHEET 4 AA1 9 THR A 128 ILE A 132 1 O THR A 128 N MET A 108 SHEET 5 AA1 9 LEU A 156 ILE A 159 1 O GLY A 158 N LEU A 131 SHEET 6 AA1 9 PHE A 175 HIS A 179 1 O GLY A 177 N ILE A 159 SHEET 7 AA1 9 VAL A 205 ALA A 209 1 O VAL A 207 N ILE A 178 SHEET 8 AA1 9 ALA A 228 ILE A 231 1 O LEU A 230 N ALA A 208 SHEET 9 AA1 9 ILE A 47 TYR A 51 1 N ILE A 48 O PHE A 229 SHEET 1 AA2 9 ILE B 47 TYR B 51 0 SHEET 2 AA2 9 GLY B 78 LEU B 82 1 O SER B 80 N TYR B 51 SHEET 3 AA2 9 ILE B 106 ALA B 109 1 O LEU B 107 N LEU B 79 SHEET 4 AA2 9 THR B 128 ILE B 132 1 O THR B 128 N MET B 108 SHEET 5 AA2 9 LEU B 156 ILE B 159 1 O GLY B 158 N LEU B 131 SHEET 6 AA2 9 PHE B 175 HIS B 179 1 O GLY B 177 N ILE B 157 SHEET 7 AA2 9 VAL B 205 ALA B 209 1 O VAL B 207 N ILE B 178 SHEET 8 AA2 9 ALA B 228 ILE B 231 1 O LEU B 230 N ALA B 208 SHEET 9 AA2 9 ILE B 47 TYR B 51 1 N ILE B 48 O PHE B 229 LINK NE2 HIS A 179 ZN ZN A 301 1555 1555 2.00 LINK NE2 HIS A 183 ZN ZN A 301 1555 1555 2.51 LINK ND1 HIS A 210 ZN ZN A 301 1555 1555 2.02 LINK NE2 HIS B 179 ZN ZN B 301 1555 1555 2.01 LINK NE2 HIS B 183 ZN ZN B 301 1555 1555 1.93 LINK ND1 HIS B 210 ZN ZN B 301 1555 1555 1.99 SITE 1 AC1 3 HIS A 179 HIS A 183 HIS A 210 SITE 1 AC2 3 HIS B 179 HIS B 183 HIS B 210 CRYST1 41.718 79.029 74.077 90.00 95.70 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023970 0.000000 0.002393 0.00000 SCALE2 0.000000 0.012654 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013567 0.00000 MASTER 377 0 2 24 18 0 2 6 0 0 0 40 END