HEADER TRANSFERASE 20-MAY-16 5K3Y TITLE CRYSTAL STRUCTURE OF AURORAB/INCENP IN COMPLEX WITH BI 811283 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AURORA KINASE B-A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AURORA/IPL1-RELATED KINASE 2-A,XAIRK2-A,SERINE/THREONINE- COMPND 5 PROTEIN KINASE 12-A,SERINE/THREONINE-PROTEIN KINASE AURORA-B-A, COMPND 6 XAURORA-B; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: INNER CENTROMERE PROTEIN A; COMPND 11 CHAIN: C, D; COMPND 12 SYNONYM: XINCENP,MITOTIC PHOSPHOPROTEIN 130; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 3 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8355; SOURCE 5 GENE: AURKB-A, AIRK2-A; SOURCE 6 EXPRESSION_SYSTEM: ENTEROBACTERIA PHAGE L1; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 268588; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 10 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 11 ORGANISM_TAXID: 8355; SOURCE 12 GENE: INCENP-A; SOURCE 13 EXPRESSION_SYSTEM: ENTEROBACTERIA PHAGE L1; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 268588 KEYWDS KINASE, INHIBITOR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.BADER,S.K.ZAHN,A.ZOEPHEL REVDAT 2 19-OCT-16 5K3Y 1 JRNL REVDAT 1 17-AUG-16 5K3Y 0 JRNL AUTH P.SINI,U.GURTLER,S.K.ZAHN,C.BAUMANN,D.RUDOLPH, JRNL AUTH 2 R.BAUMGARTINGER,E.STRAUSS,C.HASLINGER,U.TONTSCH-GRUNT, JRNL AUTH 3 I.C.WAIZENEGGER,F.SOLCA,G.BADER,A.ZOEPHEL,M.TREU,U.REISER, JRNL AUTH 4 P.GARIN-CHESA,G.BOEHMELT,N.KRAUT,J.QUANT,G.R.ADOLF JRNL TITL PHARMACOLOGICAL PROFILE OF BI 847325, AN ORALLY JRNL TITL 2 BIOAVAILABLE, ATP-COMPETITIVE INHIBITOR OF MEK AND AURORA JRNL TITL 3 KINASES. JRNL REF MOL.CANCER THER. V. 15 2388 2016 JRNL REFN ESSN 1538-8514 JRNL PMID 27496137 JRNL DOI 10.1158/1535-7163.MCT-16-0066 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.11.6 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 91285 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 4543 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.64 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.44 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 6855 REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6515 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE : 0.2450 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.96 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 340 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5117 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 102 REMARK 3 SOLVENT ATOMS : 612 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.53970 REMARK 3 B22 (A**2) : 0.76130 REMARK 3 B33 (A**2) : -0.22160 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.10110 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.200 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.088 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.084 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.085 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.082 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5424 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7331 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1976 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 124 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 777 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5424 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 645 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6674 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 0.88 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.73 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.31 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 3.3369 -0.1013 15.4093 REMARK 3 T TENSOR REMARK 3 T11: -0.0823 T22: 0.0024 REMARK 3 T33: -0.0566 T12: 0.0114 REMARK 3 T13: -0.0061 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.6771 L22: 0.6492 REMARK 3 L33: 0.9175 L12: 0.0862 REMARK 3 L13: -0.0617 L23: -0.2585 REMARK 3 S TENSOR REMARK 3 S11: 0.0140 S12: 0.1310 S13: 0.0266 REMARK 3 S21: -0.0538 S22: -0.0734 S23: -0.0076 REMARK 3 S31: -0.0297 S32: -0.0206 S33: 0.0594 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 27.3342 54.6324 55.8021 REMARK 3 T TENSOR REMARK 3 T11: -0.0326 T22: -0.0338 REMARK 3 T33: -0.0372 T12: 0.0033 REMARK 3 T13: -0.0067 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 0.2736 L22: 0.3995 REMARK 3 L33: 1.3071 L12: -0.1268 REMARK 3 L13: 0.3932 L23: -0.3256 REMARK 3 S TENSOR REMARK 3 S11: -0.0671 S12: -0.0022 S13: 0.0310 REMARK 3 S21: 0.1133 S22: -0.0002 S23: -0.0467 REMARK 3 S31: -0.0469 S32: 0.0883 S33: 0.0673 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 35.1889 43.3627 69.5299 REMARK 3 T TENSOR REMARK 3 T11: 0.0133 T22: -0.0877 REMARK 3 T33: -0.0795 T12: 0.0940 REMARK 3 T13: 0.0103 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 1.8595 L22: 1.0119 REMARK 3 L33: 3.5244 L12: -0.6526 REMARK 3 L13: 1.0033 L23: 1.0009 REMARK 3 S TENSOR REMARK 3 S11: 0.0616 S12: -0.0015 S13: -0.0830 REMARK 3 S21: 0.1492 S22: -0.0251 S23: -0.0151 REMARK 3 S31: 0.1131 S32: 0.0310 S33: -0.0365 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 15.7857 14.9017 8.0885 REMARK 3 T TENSOR REMARK 3 T11: -0.0994 T22: 0.0383 REMARK 3 T33: 0.0119 T12: 0.0063 REMARK 3 T13: -0.0351 T23: 0.1059 REMARK 3 L TENSOR REMARK 3 L11: 0.1200 L22: 1.8387 REMARK 3 L33: 1.7111 L12: -1.3523 REMARK 3 L13: 1.5692 L23: -2.1533 REMARK 3 S TENSOR REMARK 3 S11: 0.0069 S12: 0.0050 S13: 0.0456 REMARK 3 S21: -0.0478 S22: -0.0908 S23: -0.0859 REMARK 3 S31: -0.2731 S32: 0.1509 S33: 0.0840 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5K3Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221682. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9801 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 109777 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.497 REMARK 200 RESOLUTION RANGE LOW (A) : 44.151 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : 0.11500 REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.60700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350, 0.1M BIS-TRIS PROPANE PH REMARK 280 8.0, 2 MM TCEP, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.64750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 77 REMARK 465 THR A 78 REMARK 465 ALA A 79 REMARK 465 LEU A 80 REMARK 465 ALA A 81 REMARK 465 GLU A 82 REMARK 465 MET A 83 REMARK 465 PRO A 84 REMARK 465 LYS A 85 REMARK 465 ARG A 86 REMARK 465 LYS A 87 REMARK 465 THR A 248 REMARK 465 GLN A 356 REMARK 465 GLY B 77 REMARK 465 THR B 78 REMARK 465 THR B 248 REMARK 465 MET C 789 REMARK 465 ASP C 790 REMARK 465 GLU C 791 REMARK 465 SER C 792 REMARK 465 GLN C 793 REMARK 465 PRO C 794 REMARK 465 ARG C 795 REMARK 465 LYS C 796 REMARK 465 PRO C 797 REMARK 465 ILE C 798 REMARK 465 PRO C 799 REMARK 465 ALA C 800 REMARK 465 TRP C 801 REMARK 465 ALA C 802 REMARK 465 ASN C 838 REMARK 465 LYS C 839 REMARK 465 SER C 840 REMARK 465 LYS C 841 REMARK 465 PRO C 842 REMARK 465 ARG C 843 REMARK 465 TYR C 844 REMARK 465 PHE C 845 REMARK 465 LYS C 846 REMARK 465 ARG C 847 REMARK 465 MET D 789 REMARK 465 ASP D 790 REMARK 465 GLU D 791 REMARK 465 SER D 792 REMARK 465 GLN D 793 REMARK 465 PRO D 794 REMARK 465 ARG D 795 REMARK 465 LYS D 796 REMARK 465 PRO D 797 REMARK 465 ILE D 798 REMARK 465 PRO D 799 REMARK 465 ALA D 800 REMARK 465 TRP D 801 REMARK 465 ALA D 802 REMARK 465 SER D 803 REMARK 465 GLY D 804 REMARK 465 LYS D 841 REMARK 465 PRO D 842 REMARK 465 ARG D 843 REMARK 465 TYR D 844 REMARK 465 PHE D 845 REMARK 465 LYS D 846 REMARK 465 ARG D 847 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 158 -174.88 -171.87 REMARK 500 ASP A 162 -159.03 -129.57 REMARK 500 ASP A 216 46.00 -148.80 REMARK 500 ASN B 158 -176.55 -171.34 REMARK 500 ASP B 216 42.81 -148.45 REMARK 500 ASP B 267 -163.54 -128.02 REMARK 500 LYS C 817 75.93 -119.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 771 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH B 772 DISTANCE = 7.16 ANGSTROMS REMARK 525 HOH D 927 DISTANCE = 7.92 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TPO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6Q4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TPO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6Q4 B 402 DBREF 5K3Y A 78 356 UNP Q6DE08 AUKBA_XENLA 78 356 DBREF 5K3Y B 78 356 UNP Q6DE08 AUKBA_XENLA 78 356 DBREF 5K3Y C 790 847 UNP O13024 INCEA_XENLA 790 847 DBREF 5K3Y D 790 847 UNP O13024 INCEA_XENLA 790 847 SEQADV 5K3Y GLY A 77 UNP Q6DE08 EXPRESSION TAG SEQADV 5K3Y VAL A 96 UNP Q6DE08 GLY 96 CONFLICT SEQADV 5K3Y GLY B 77 UNP Q6DE08 EXPRESSION TAG SEQADV 5K3Y VAL B 96 UNP Q6DE08 GLY 96 CONFLICT SEQADV 5K3Y MET C 789 UNP O13024 INITIATING METHIONINE SEQADV 5K3Y MET D 789 UNP O13024 INITIATING METHIONINE SEQRES 1 A 280 GLY THR ALA LEU ALA GLU MET PRO LYS ARG LYS PHE THR SEQRES 2 A 280 ILE ASP ASP PHE ASP ILE VAL ARG PRO LEU GLY LYS GLY SEQRES 3 A 280 LYS PHE GLY ASN VAL TYR LEU ALA ARG GLU LYS GLN ASN SEQRES 4 A 280 LYS PHE ILE MET ALA LEU LYS VAL LEU PHE LYS SER GLN SEQRES 5 A 280 LEU GLU LYS GLU GLY VAL GLU HIS GLN LEU ARG ARG GLU SEQRES 6 A 280 ILE GLU ILE GLN SER HIS LEU ARG HIS PRO ASN ILE LEU SEQRES 7 A 280 ARG MET TYR ASN TYR PHE HIS ASP ARG LYS ARG ILE TYR SEQRES 8 A 280 LEU MET LEU GLU PHE ALA PRO ARG GLY GLU LEU TYR LYS SEQRES 9 A 280 GLU LEU GLN LYS HIS GLY ARG PHE ASP GLU GLN ARG SER SEQRES 10 A 280 ALA THR PHE MET GLU GLU LEU ALA ASP ALA LEU HIS TYR SEQRES 11 A 280 CYS HIS GLU ARG LYS VAL ILE HIS ARG ASP ILE LYS PRO SEQRES 12 A 280 GLU ASN LEU LEU MET GLY TYR LYS GLY GLU LEU LYS ILE SEQRES 13 A 280 ALA ASP PHE GLY TRP SER VAL HIS ALA PRO SER LEU ARG SEQRES 14 A 280 ARG ARG THR MET CYS GLY THR LEU ASP TYR LEU PRO PRO SEQRES 15 A 280 GLU MET ILE GLU GLY LYS THR HIS ASP GLU LYS VAL ASP SEQRES 16 A 280 LEU TRP CYS ALA GLY VAL LEU CYS TYR GLU PHE LEU VAL SEQRES 17 A 280 GLY MET PRO PRO PHE ASP SER PRO SER HIS THR GLU THR SEQRES 18 A 280 HIS ARG ARG ILE VAL ASN VAL ASP LEU LYS PHE PRO PRO SEQRES 19 A 280 PHE LEU SER ASP GLY SER LYS ASP LEU ILE SER LYS LEU SEQRES 20 A 280 LEU ARG TYR HIS PRO PRO GLN ARG LEU PRO LEU LYS GLY SEQRES 21 A 280 VAL MET GLU HIS PRO TRP VAL LYS ALA ASN SER ARG ARG SEQRES 22 A 280 VAL LEU PRO PRO VAL TYR GLN SEQRES 1 B 280 GLY THR ALA LEU ALA GLU MET PRO LYS ARG LYS PHE THR SEQRES 2 B 280 ILE ASP ASP PHE ASP ILE VAL ARG PRO LEU GLY LYS GLY SEQRES 3 B 280 LYS PHE GLY ASN VAL TYR LEU ALA ARG GLU LYS GLN ASN SEQRES 4 B 280 LYS PHE ILE MET ALA LEU LYS VAL LEU PHE LYS SER GLN SEQRES 5 B 280 LEU GLU LYS GLU GLY VAL GLU HIS GLN LEU ARG ARG GLU SEQRES 6 B 280 ILE GLU ILE GLN SER HIS LEU ARG HIS PRO ASN ILE LEU SEQRES 7 B 280 ARG MET TYR ASN TYR PHE HIS ASP ARG LYS ARG ILE TYR SEQRES 8 B 280 LEU MET LEU GLU PHE ALA PRO ARG GLY GLU LEU TYR LYS SEQRES 9 B 280 GLU LEU GLN LYS HIS GLY ARG PHE ASP GLU GLN ARG SER SEQRES 10 B 280 ALA THR PHE MET GLU GLU LEU ALA ASP ALA LEU HIS TYR SEQRES 11 B 280 CYS HIS GLU ARG LYS VAL ILE HIS ARG ASP ILE LYS PRO SEQRES 12 B 280 GLU ASN LEU LEU MET GLY TYR LYS GLY GLU LEU LYS ILE SEQRES 13 B 280 ALA ASP PHE GLY TRP SER VAL HIS ALA PRO SER LEU ARG SEQRES 14 B 280 ARG ARG THR MET CYS GLY THR LEU ASP TYR LEU PRO PRO SEQRES 15 B 280 GLU MET ILE GLU GLY LYS THR HIS ASP GLU LYS VAL ASP SEQRES 16 B 280 LEU TRP CYS ALA GLY VAL LEU CYS TYR GLU PHE LEU VAL SEQRES 17 B 280 GLY MET PRO PRO PHE ASP SER PRO SER HIS THR GLU THR SEQRES 18 B 280 HIS ARG ARG ILE VAL ASN VAL ASP LEU LYS PHE PRO PRO SEQRES 19 B 280 PHE LEU SER ASP GLY SER LYS ASP LEU ILE SER LYS LEU SEQRES 20 B 280 LEU ARG TYR HIS PRO PRO GLN ARG LEU PRO LEU LYS GLY SEQRES 21 B 280 VAL MET GLU HIS PRO TRP VAL LYS ALA ASN SER ARG ARG SEQRES 22 B 280 VAL LEU PRO PRO VAL TYR GLN SEQRES 1 C 59 MET ASP GLU SER GLN PRO ARG LYS PRO ILE PRO ALA TRP SEQRES 2 C 59 ALA SER GLY ASN LEU LEU THR GLN ALA ILE ARG GLN GLN SEQRES 3 C 59 TYR TYR LYS PRO ILE ASP VAL ASP ARG MET TYR GLY THR SEQRES 4 C 59 ILE ASP SER PRO LYS LEU GLU GLU LEU PHE ASN LYS SER SEQRES 5 C 59 LYS PRO ARG TYR PHE LYS ARG SEQRES 1 D 59 MET ASP GLU SER GLN PRO ARG LYS PRO ILE PRO ALA TRP SEQRES 2 D 59 ALA SER GLY ASN LEU LEU THR GLN ALA ILE ARG GLN GLN SEQRES 3 D 59 TYR TYR LYS PRO ILE ASP VAL ASP ARG MET TYR GLY THR SEQRES 4 D 59 ILE ASP SER PRO LYS LEU GLU GLU LEU PHE ASN LYS SER SEQRES 5 D 59 LYS PRO ARG TYR PHE LYS ARG HET TPO A 401 11 HET 6Q4 A 402 40 HET TPO B 401 11 HET 6Q4 B 402 40 HETNAM TPO PHOSPHOTHREONINE HETNAM 6Q4 N-METHYL-N-(1-METHYLPIPERIDIN-4-YL)-4-{[4-({(1R,2S)-2- HETNAM 2 6Q4 [(PROPAN-2-YL)CARBAMOYL]CYCLOPENTYL}AMINO)-5- HETNAM 3 6Q4 (TRIFLUOROMETHYL)PYRIMIDIN-2-YL]AMINO}BENZAMIDE HETSYN TPO PHOSPHONOTHREONINE FORMUL 5 TPO 2(C4 H10 N O6 P) FORMUL 6 6Q4 2(C28 H38 F3 N7 O2) FORMUL 9 HOH *612(H2 O) HELIX 1 AA1 THR A 89 ASP A 91 5 3 HELIX 2 AA2 LYS A 126 GLY A 133 1 8 HELIX 3 AA3 VAL A 134 SER A 146 1 13 HELIX 4 AA4 LEU A 178 GLY A 186 1 9 HELIX 5 AA5 ASP A 189 GLU A 209 1 21 HELIX 6 AA6 LYS A 218 GLU A 220 5 3 HELIX 7 AA7 THR A 252 LEU A 256 5 5 HELIX 8 AA8 PRO A 257 GLU A 262 1 6 HELIX 9 AA9 LYS A 269 GLY A 285 1 17 HELIX 10 AB1 SER A 293 ASN A 303 1 11 HELIX 11 AB2 SER A 313 LEU A 324 1 12 HELIX 12 AB3 HIS A 327 ARG A 331 5 5 HELIX 13 AB4 PRO A 333 GLU A 339 1 7 HELIX 14 AB5 HIS A 340 SER A 347 1 8 HELIX 15 AB6 THR B 89 ASP B 91 5 3 HELIX 16 AB7 LYS B 126 GLU B 132 1 7 HELIX 17 AB8 VAL B 134 SER B 146 1 13 HELIX 18 AB9 LEU B 178 GLY B 186 1 9 HELIX 19 AC1 ASP B 189 ARG B 210 1 22 HELIX 20 AC2 LYS B 218 GLU B 220 5 3 HELIX 21 AC3 THR B 252 LEU B 256 5 5 HELIX 22 AC4 PRO B 257 GLU B 262 1 6 HELIX 23 AC5 LYS B 269 GLY B 285 1 17 HELIX 24 AC6 SER B 293 ASN B 303 1 11 HELIX 25 AC7 SER B 313 LEU B 324 1 12 HELIX 26 AC8 HIS B 327 ARG B 331 5 5 HELIX 27 AC9 PRO B 333 HIS B 340 1 8 HELIX 28 AD1 HIS B 340 SER B 347 1 8 HELIX 29 AD2 GLY C 804 LYS C 817 1 14 HELIX 30 AD3 ASP C 820 TYR C 825 1 6 HELIX 31 AD4 LYS C 832 PHE C 837 1 6 HELIX 32 AD5 LEU D 806 LYS D 817 1 12 HELIX 33 AD6 ASP D 820 TYR D 825 1 6 HELIX 34 AD7 LYS D 832 LEU D 836 5 5 SHEET 1 AA1 5 PHE A 93 LYS A 101 0 SHEET 2 AA1 5 ASN A 106 GLU A 112 -1 O LEU A 109 N ARG A 97 SHEET 3 AA1 5 PHE A 117 PHE A 125 -1 O VAL A 123 N ASN A 106 SHEET 4 AA1 5 ARG A 165 LEU A 170 -1 O LEU A 170 N ALA A 120 SHEET 5 AA1 5 MET A 156 HIS A 161 -1 N PHE A 160 O TYR A 167 SHEET 1 AA2 3 GLY A 176 GLU A 177 0 SHEET 2 AA2 3 LEU A 222 MET A 224 -1 O MET A 224 N GLY A 176 SHEET 3 AA2 3 LEU A 230 ILE A 232 -1 O LYS A 231 N LEU A 223 SHEET 1 AA3 2 VAL A 212 ILE A 213 0 SHEET 2 AA3 2 VAL A 239 HIS A 240 -1 O VAL A 239 N ILE A 213 SHEET 1 AA4 5 PHE B 93 GLY B 102 0 SHEET 2 AA4 5 GLY B 105 GLU B 112 -1 O LEU B 109 N ARG B 97 SHEET 3 AA4 5 PHE B 117 PHE B 125 -1 O LEU B 121 N TYR B 108 SHEET 4 AA4 5 ARG B 165 LEU B 170 -1 O LEU B 170 N ALA B 120 SHEET 5 AA4 5 MET B 156 HIS B 161 -1 N PHE B 160 O TYR B 167 SHEET 1 AA5 3 GLY B 176 GLU B 177 0 SHEET 2 AA5 3 LEU B 222 MET B 224 -1 O MET B 224 N GLY B 176 SHEET 3 AA5 3 LEU B 230 ILE B 232 -1 O LYS B 231 N LEU B 223 SHEET 1 AA6 2 VAL B 212 ILE B 213 0 SHEET 2 AA6 2 VAL B 239 HIS B 240 -1 O VAL B 239 N ILE B 213 LINK C ARG A 247 N TPO A 401 1555 1555 1.35 LINK N MET A 249 C TPO A 401 1555 1555 1.35 LINK C ARG B 247 N TPO B 401 1555 1555 1.34 LINK N MET B 249 C TPO B 401 1555 1555 1.34 SITE 1 AC1 9 ARG A 215 ARG A 246 ARG A 247 MET A 249 SITE 2 AC1 9 CYS A 250 HIS A 266 HOH A 592 HOH A 596 SITE 3 AC1 9 LYS D 817 SITE 1 AC2 15 LEU A 99 GLY A 100 VAL A 107 ALA A 120 SITE 2 AC2 15 LEU A 154 LEU A 170 GLU A 171 PHE A 172 SITE 3 AC2 15 ALA A 173 GLY A 176 GLU A 177 LEU A 223 SITE 4 AC2 15 ALA A 233 HOH A 537 HOH A 569 SITE 1 AC3 10 ARG B 140 ARG B 215 ARG B 246 ARG B 247 SITE 2 AC3 10 MET B 249 CYS B 250 MET B 260 HIS B 266 SITE 3 AC3 10 HOH B 604 HOH B 660 SITE 1 AC4 14 LYS B 101 GLY B 102 VAL B 107 ALA B 120 SITE 2 AC4 14 LEU B 154 LEU B 170 GLU B 171 PHE B 172 SITE 3 AC4 14 ALA B 173 GLY B 176 GLU B 220 LEU B 223 SITE 4 AC4 14 HOH B 519 HOH B 622 CRYST1 45.907 67.295 116.618 90.00 96.19 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021783 0.000000 0.002363 0.00000 SCALE2 0.000000 0.014860 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008625 0.00000 MASTER 408 0 4 34 20 0 14 6 0 0 0 54 END