HEADER SIGALING PROTEIN 15-MAY-16 5JYU TITLE NMR STRUCTURE OF PSEUDO RECEIVER DOMAIN OF CIKA FROM TITLE 2 THERMOSYNECHOCOCCUS ELONGATUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TWO-COMPONENT SENSOR HISTIDINE KINASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS ELONGATUS (STRAIN BP-1); SOURCE 3 ORGANISM_TAXID: 197221; SOURCE 4 STRAIN: BP-1; SOURCE 5 GENE: TLL0899; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS CIRCADIAN CLOCK, SIGNALING PROTEIN, SIGALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR R.D.TSENG,A.L.LIWANG REVDAT 3 25-DEC-19 5JYU 1 REMARK REVDAT 2 20-SEP-17 5JYU 1 REMARK REVDAT 1 29-MAR-17 5JYU 0 JRNL AUTH R.TSENG,N.F.GOULARTE,A.CHAVAN,J.LUU,S.E.COHEN,Y.G.CHANG, JRNL AUTH 2 J.HEISLER,S.LI,A.K.MICHAEL,S.TRIPATHI,S.S.GOLDEN,A.LIWANG, JRNL AUTH 3 C.L.PARTCH JRNL TITL STRUCTURAL BASIS OF THE DAY-NIGHT TRANSITION IN A BACTERIAL JRNL TITL 2 CIRCADIAN CLOCK. JRNL REF SCIENCE V. 355 1174 2017 JRNL REFN ESSN 1095-9203 JRNL PMID 28302851 JRNL DOI 10.1126/SCIENCE.AAG2516 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH 2.39 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JYU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000220396. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 25 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1500 UM [U-99% 13C; U-99% 15N] REMARK 210 PSEUDO RECEIVER DOMAIN OF CIKA, REMARK 210 95% H2O/5% D2O; 1500 UM [U-99% REMARK 210 13C; U-99% 15N] PSEUDO RECEIVER REMARK 210 DOMAIN OF CIKA, 99.96% D2O; 300 REMARK 210 UM [U-99% 13C; U-99% 15N] PSEUDO REMARK 210 RECEIVER DOMAIN OF CIKA, 90% H2O/ REMARK 210 10% D2O; 450 UM [U-99% 13C; U-99% REMARK 210 15N] PSEUDO RECEIVER DOMAIN OF REMARK 210 CIKA, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCACB; 3D HN(COCA)CB; 3D REMARK 210 HNCO; 3D HN(CA)CO; 3D HBHA(CO)NH; REMARK 210 3D H(CCO)NH; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY; 3D HCCH-COSY; REMARK 210 3D IPAP-HNCO(CA); 2D 1H-15N HSQC; REMARK 210 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XIPP, MARS, NMRPIPE, X-PLOR NIH REMARK 210 2.39 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 645 -72.99 -126.87 REMARK 500 1 THR A 655 108.16 -44.03 REMARK 500 2 ASP A 645 -32.62 -145.51 REMARK 500 2 THR A 655 103.84 -31.38 REMARK 500 4 SER A 620 137.34 -172.36 REMARK 500 4 ASP A 645 -37.21 -136.84 REMARK 500 4 THR A 655 104.80 -33.58 REMARK 500 4 SER A 693 -114.68 49.82 REMARK 500 5 THR A 655 109.84 -43.86 REMARK 500 5 LEU A 724 -102.18 57.79 REMARK 500 6 SER A 620 148.27 -172.44 REMARK 500 6 ASP A 645 -28.32 -144.17 REMARK 500 6 THR A 655 104.02 -31.10 REMARK 500 6 LYS A 694 83.10 63.20 REMARK 500 7 VAL A 644 41.87 -108.18 REMARK 500 7 ASP A 645 -31.86 -156.90 REMARK 500 7 THR A 655 109.39 -43.11 REMARK 500 8 ASP A 645 -33.26 -176.75 REMARK 500 8 LEU A 654 30.10 -99.64 REMARK 500 8 THR A 655 104.38 -30.78 REMARK 500 9 SER A 620 146.68 -172.49 REMARK 500 9 ASP A 645 -47.60 -134.92 REMARK 500 9 THR A 655 104.12 -30.30 REMARK 500 9 LYS A 694 80.45 63.13 REMARK 500 10 ASP A 645 -34.83 -155.92 REMARK 500 10 LEU A 654 30.79 -98.62 REMARK 500 10 THR A 655 104.52 -30.33 REMARK 500 11 SER A 620 139.39 -172.19 REMARK 500 11 THR A 655 104.25 -31.08 REMARK 500 11 ASN A 696 -67.41 -109.41 REMARK 500 11 GLN A 698 25.42 174.58 REMARK 500 12 ASP A 645 -25.87 -150.35 REMARK 500 12 GLN A 698 77.15 -117.08 REMARK 500 13 ASP A 645 -39.84 -135.03 REMARK 500 13 THR A 655 109.17 -42.96 REMARK 500 13 THR A 722 37.95 37.29 REMARK 500 14 ASP A 645 -35.90 -154.59 REMARK 500 14 THR A 655 104.76 -32.16 REMARK 500 14 THR A 722 -96.76 33.69 REMARK 500 15 ASP A 645 -34.66 -151.32 REMARK 500 15 THR A 655 109.89 -46.40 REMARK 500 15 LEU A 724 -70.93 -135.96 REMARK 500 16 ASP A 645 -33.75 -143.17 REMARK 500 16 THR A 655 105.05 -35.03 REMARK 500 17 ASP A 645 -37.14 -150.58 REMARK 500 17 THR A 655 109.72 -43.36 REMARK 500 18 ASP A 645 -31.68 -179.41 REMARK 500 18 THR A 655 109.92 -44.79 REMARK 500 19 SER A 620 137.90 -171.36 REMARK 500 19 ASP A 645 -34.71 -137.15 REMARK 500 REMARK 500 THIS ENTRY HAS 55 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30092 RELATED DB: BMRB REMARK 900 RELATED ID: 5JYV RELATED DB: PDB REMARK 900 RELATED ID: 5JYT RELATED DB: PDB DBREF 5JYU A 613 729 UNP Q8DKG0 Q8DKG0_THEEB 613 729 SEQRES 1 A 117 GLU GLY ARG ILE VAL LEU VAL SER GLU ASP GLU ALA THR SEQRES 2 A 117 SER THR LEU ILE CYS SER ILE LEU THR THR ALA GLY TYR SEQRES 3 A 117 GLN VAL ILE TRP LEU VAL ASP GLY GLU VAL GLU ARG LEU SEQRES 4 A 117 LEU ALA LEU THR PRO ILE ALA VAL LEU LEU ALA GLU PRO SEQRES 5 A 117 PHE SER TYR GLY ASP VAL GLN GLU LEU VAL ASP GLN LEU SEQRES 6 A 117 ARG GLN ARG CYS THR PRO GLU GLN LEU LYS ILE PHE ILE SEQRES 7 A 117 LEU GLY SER LYS GLY ASN TYR GLN GLY VAL ASP ARG TYR SEQRES 8 A 117 ILE PRO LEU PRO ILE HIS PRO GLU SER PHE LEU GLN GLN SEQRES 9 A 117 VAL THR MET GLY LEU THR SER LEU ALA THR SER ALA GLN HELIX 1 AA1 ASP A 622 ALA A 636 1 15 HELIX 2 AA2 GLU A 647 LEU A 654 1 8 HELIX 3 AA3 ASP A 669 CYS A 681 1 13 HELIX 4 AA4 HIS A 709 THR A 722 1 14 HELIX 5 AA5 SER A 723 ALA A 725 5 3 SHEET 1 AA1 5 TYR A 638 LEU A 643 0 SHEET 2 AA1 5 GLY A 614 VAL A 619 1 N LEU A 618 O LEU A 643 SHEET 3 AA1 5 ALA A 658 ALA A 662 1 O LEU A 660 N VAL A 619 SHEET 4 AA1 5 LYS A 687 GLY A 692 1 O LEU A 691 N LEU A 661 SHEET 5 AA1 5 ARG A 702 PRO A 705 1 O ILE A 704 N ILE A 690 CISPEP 1 GLU A 663 PRO A 664 1 -0.41 CISPEP 2 LEU A 706 PRO A 707 1 -1.09 CISPEP 3 GLU A 663 PRO A 664 2 -0.97 CISPEP 4 LEU A 706 PRO A 707 2 -1.74 CISPEP 5 GLU A 663 PRO A 664 3 -0.91 CISPEP 6 LEU A 706 PRO A 707 3 -1.31 CISPEP 7 GLU A 663 PRO A 664 4 -1.20 CISPEP 8 LEU A 706 PRO A 707 4 -1.16 CISPEP 9 GLU A 663 PRO A 664 5 -1.08 CISPEP 10 LEU A 706 PRO A 707 5 -1.27 CISPEP 11 GLU A 663 PRO A 664 6 -0.89 CISPEP 12 LEU A 706 PRO A 707 6 -0.47 CISPEP 13 GLU A 663 PRO A 664 7 -0.80 CISPEP 14 LEU A 706 PRO A 707 7 -0.19 CISPEP 15 GLU A 663 PRO A 664 8 -0.79 CISPEP 16 LEU A 706 PRO A 707 8 -0.26 CISPEP 17 GLU A 663 PRO A 664 9 -0.85 CISPEP 18 LEU A 706 PRO A 707 9 -0.24 CISPEP 19 GLU A 663 PRO A 664 10 -1.20 CISPEP 20 LEU A 706 PRO A 707 10 -1.14 CISPEP 21 GLU A 663 PRO A 664 11 -1.38 CISPEP 22 LEU A 706 PRO A 707 11 -0.30 CISPEP 23 GLU A 663 PRO A 664 12 -0.89 CISPEP 24 LEU A 706 PRO A 707 12 -1.23 CISPEP 25 GLU A 663 PRO A 664 13 -1.02 CISPEP 26 LEU A 706 PRO A 707 13 -1.30 CISPEP 27 GLU A 663 PRO A 664 14 -0.93 CISPEP 28 LEU A 706 PRO A 707 14 0.12 CISPEP 29 GLU A 663 PRO A 664 15 -0.29 CISPEP 30 LEU A 706 PRO A 707 15 -0.11 CISPEP 31 GLU A 663 PRO A 664 16 -1.37 CISPEP 32 LEU A 706 PRO A 707 16 -0.19 CISPEP 33 GLU A 663 PRO A 664 17 -0.57 CISPEP 34 LEU A 706 PRO A 707 17 -0.78 CISPEP 35 GLU A 663 PRO A 664 18 -0.88 CISPEP 36 LEU A 706 PRO A 707 18 -1.22 CISPEP 37 GLU A 663 PRO A 664 19 -1.70 CISPEP 38 LEU A 706 PRO A 707 19 -0.29 CISPEP 39 GLU A 663 PRO A 664 20 -0.75 CISPEP 40 LEU A 706 PRO A 707 20 -0.14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 153 0 0 5 5 0 0 6 0 0 0 9 END