HEADER TOXIN 31-MAR-16 5J43 TITLE CDIA-CT FROM UROPATHOGENIC ESCHERICHIA COLI IN COMPLEX WITH CYSK COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTEINE SYNTHASE A; COMPND 3 CHAIN: E, A; COMPND 4 SYNONYM: CSASE A,O-ACETYLSERINE (THIOL)-LYASE A,OAS-TL A,O- COMPND 5 ACETYLSERINE SULFHYDRYLASE A,SULFATE STARVATION-INDUCED PROTEIN 5, COMPND 6 SSI5; COMPND 7 EC: 2.5.1.47; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: TRNA NUCLEASE CDIA; COMPND 11 CHAIN: F, B; COMPND 12 SYNONYM: TRNASE CDIA,TOXIN CDIA; COMPND 13 EC: 3.1.-.-; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O157:H7; SOURCE 3 ORGANISM_TAXID: 83334; SOURCE 4 GENE: CYSK, Z3680, ECS3286; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O6:K15:H31 (STRAIN 536 / SOURCE 10 UPEC); SOURCE 11 ORGANISM_TAXID: 362663; SOURCE 12 STRAIN: 536 / UPEC; SOURCE 13 GENE: CDIA, ECP_4580; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS COMPLEX, TOXIN, ENDONUCLEASE EXPDTA X-RAY DIFFRACTION AUTHOR R.P.MORSE,C.W.GOULDING,P.M.JOHNSON REVDAT 3 03-MAY-17 5J43 1 HET HETNAM REVDAT 2 12-APR-17 5J43 1 JRNL REVDAT 1 27-JUL-16 5J43 0 JRNL AUTH P.M.JOHNSON,C.M.BECK,R.P.MORSE,F.GARZA-SANCHEZ,D.A.LOW, JRNL AUTH 2 C.S.HAYES,C.W.GOULDING JRNL TITL UNRAVELING THE ESSENTIAL ROLE OF CYSK IN CDI TOXIN JRNL TITL 2 ACTIVATION. JRNL REF PROC. NATL. ACAD. SCI. V. 113 9792 2016 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 27531961 JRNL DOI 10.1073/PNAS.1607112113 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 39640 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1978 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.9248 - 6.5014 0.99 2702 148 0.1608 0.1788 REMARK 3 2 6.5014 - 5.1628 0.98 2677 142 0.1950 0.1929 REMARK 3 3 5.1628 - 4.5109 1.00 2678 152 0.1617 0.1804 REMARK 3 4 4.5109 - 4.0987 0.99 2719 145 0.1712 0.1959 REMARK 3 5 4.0987 - 3.8051 1.00 2704 142 0.1875 0.2004 REMARK 3 6 3.8051 - 3.5809 0.99 2693 144 0.1968 0.2265 REMARK 3 7 3.5809 - 3.4016 0.99 2687 141 0.2081 0.2673 REMARK 3 8 3.4016 - 3.2536 0.99 2707 141 0.2236 0.2357 REMARK 3 9 3.2536 - 3.1284 0.99 2698 134 0.2429 0.2648 REMARK 3 10 3.1284 - 3.0204 0.99 2678 131 0.2474 0.3036 REMARK 3 11 3.0204 - 2.9260 0.99 2660 139 0.2543 0.2541 REMARK 3 12 2.9260 - 2.8424 0.99 2739 145 0.2556 0.3329 REMARK 3 13 2.8424 - 2.7676 0.99 2647 138 0.2749 0.3603 REMARK 3 14 2.7676 - 2.7001 0.98 2673 136 0.3019 0.3107 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6298 REMARK 3 ANGLE : 1.225 8513 REMARK 3 CHIRALITY : 0.047 991 REMARK 3 PLANARITY : 0.008 1106 REMARK 3 DIHEDRAL : 13.014 2375 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5J43 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000201352. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 70 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM (IMOSFLM: 7.2.1) REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39863 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 64.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX (PHASER-MR: 1.10.1_2155) REMARK 200 STARTING MODEL: 1OAS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM SULFATE, 0.1 M BIS-TRIS REMARK 280 PROPANE, PH 7.9, 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 182.68500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 91.34250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 274.02750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET E 1 REMARK 465 PHE E 316 REMARK 465 THR E 317 REMARK 465 GLU E 318 REMARK 465 LYS E 319 REMARK 465 GLU E 320 REMARK 465 LEU E 321 REMARK 465 GLN E 322 REMARK 465 GLN E 323 REMARK 465 MET F -11 REMARK 465 ALA F -10 REMARK 465 LYS F -9 REMARK 465 SER F -8 REMARK 465 HIS F -7 REMARK 465 HIS F -6 REMARK 465 HIS F -5 REMARK 465 HIS F -4 REMARK 465 HIS F -3 REMARK 465 HIS F -2 REMARK 465 THR F -1 REMARK 465 SER F 0 REMARK 465 VAL F 1 REMARK 465 GLU F 2 REMARK 465 ASN F 3 REMARK 465 ASN F 4 REMARK 465 ALA F 5 REMARK 465 LEU F 6 REMARK 465 SER F 7 REMARK 465 LEU F 8 REMARK 465 VAL F 9 REMARK 465 ALA F 10 REMARK 465 ARG F 11 REMARK 465 GLY F 12 REMARK 465 CYS F 13 REMARK 465 ALA F 14 REMARK 465 VAL F 15 REMARK 465 ALA F 16 REMARK 465 ALA F 17 REMARK 465 PRO F 18 REMARK 465 CYS F 19 REMARK 465 ARG F 20 REMARK 465 THR F 21 REMARK 465 LYS F 22 REMARK 465 VAL F 23 REMARK 465 ALA F 24 REMARK 465 GLU F 25 REMARK 465 GLN F 26 REMARK 465 LEU F 27 REMARK 465 LEU F 28 REMARK 465 GLU F 29 REMARK 465 ILE F 30 REMARK 465 GLY F 31 REMARK 465 ALA F 32 REMARK 465 LYS F 33 REMARK 465 ALA F 34 REMARK 465 GLY F 35 REMARK 465 MET F 36 REMARK 465 ALA F 37 REMARK 465 GLY F 38 REMARK 465 LEU F 39 REMARK 465 ALA F 40 REMARK 465 GLY F 41 REMARK 465 ALA F 42 REMARK 465 ALA F 43 REMARK 465 VAL F 44 REMARK 465 LYS F 45 REMARK 465 ASP F 46 REMARK 465 MET F 47 REMARK 465 ALA F 48 REMARK 465 ASP F 49 REMARK 465 ARG F 50 REMARK 465 MET F 51 REMARK 465 THR F 52 REMARK 465 SER F 53 REMARK 465 ASP F 54 REMARK 465 GLU F 55 REMARK 465 LEU F 56 REMARK 465 GLU F 57 REMARK 465 HIS F 58 REMARK 465 LEU F 59 REMARK 465 ILE F 60 REMARK 465 THR F 61 REMARK 465 LEU F 62 REMARK 465 GLN F 63 REMARK 465 MET F 64 REMARK 465 MET F 65 REMARK 465 GLY F 66 REMARK 465 ASN F 67 REMARK 465 ASP F 68 REMARK 465 GLU F 69 REMARK 465 ILE F 70 REMARK 465 THR F 71 REMARK 465 THR F 72 REMARK 465 LYS F 73 REMARK 465 TYR F 74 REMARK 465 LEU F 75 REMARK 465 SER F 76 REMARK 465 SER F 77 REMARK 465 LEU F 78 REMARK 465 HIS F 79 REMARK 465 ASP F 80 REMARK 465 LYS F 81 REMARK 465 TYR F 82 REMARK 465 GLY F 83 REMARK 465 SER F 84 REMARK 465 GLY F 85 REMARK 465 ALA F 86 REMARK 465 ALA F 87 REMARK 465 SER F 88 REMARK 465 ASN F 89 REMARK 465 PRO F 90 REMARK 465 ASN F 91 REMARK 465 ILE F 92 REMARK 465 GLY F 93 REMARK 465 LYS F 94 REMARK 465 ASP F 95 REMARK 465 LEU F 96 REMARK 465 THR F 97 REMARK 465 ASP F 98 REMARK 465 ALA F 99 REMARK 465 GLU F 100 REMARK 465 LYS F 101 REMARK 465 VAL F 102 REMARK 465 GLU F 103 REMARK 465 LEU F 104 REMARK 465 GLY F 105 REMARK 465 GLY F 106 REMARK 465 SER F 107 REMARK 465 GLY F 108 REMARK 465 SER F 109 REMARK 465 GLY F 110 REMARK 465 THR F 111 REMARK 465 GLY F 112 REMARK 465 THR F 113 REMARK 465 PRO F 114 REMARK 465 PRO F 115 REMARK 465 PRO F 116 REMARK 465 SER F 117 REMARK 465 GLU F 118 REMARK 465 ASN F 119 REMARK 465 ASP F 120 REMARK 465 PRO F 121 REMARK 465 LYS F 122 REMARK 465 GLN F 123 REMARK 465 GLN F 124 REMARK 465 ASN F 125 REMARK 465 GLU F 126 REMARK 465 MET A 1 REMARK 465 LEU A 315 REMARK 465 PHE A 316 REMARK 465 THR A 317 REMARK 465 GLU A 318 REMARK 465 LYS A 319 REMARK 465 GLU A 320 REMARK 465 LEU A 321 REMARK 465 GLN A 322 REMARK 465 GLN A 323 REMARK 465 MET B -11 REMARK 465 ALA B -10 REMARK 465 LYS B -9 REMARK 465 SER B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 THR B -1 REMARK 465 SER B 0 REMARK 465 VAL B 1 REMARK 465 GLU B 2 REMARK 465 ASN B 3 REMARK 465 ASN B 4 REMARK 465 ALA B 5 REMARK 465 LEU B 6 REMARK 465 SER B 7 REMARK 465 LEU B 8 REMARK 465 VAL B 9 REMARK 465 ALA B 10 REMARK 465 ARG B 11 REMARK 465 GLY B 12 REMARK 465 CYS B 13 REMARK 465 ALA B 14 REMARK 465 VAL B 15 REMARK 465 ALA B 16 REMARK 465 ALA B 17 REMARK 465 PRO B 18 REMARK 465 CYS B 19 REMARK 465 ARG B 20 REMARK 465 THR B 21 REMARK 465 LYS B 22 REMARK 465 VAL B 23 REMARK 465 ALA B 24 REMARK 465 GLU B 25 REMARK 465 GLN B 26 REMARK 465 LEU B 27 REMARK 465 LEU B 28 REMARK 465 GLU B 29 REMARK 465 ILE B 30 REMARK 465 GLY B 31 REMARK 465 ALA B 32 REMARK 465 LYS B 33 REMARK 465 ALA B 34 REMARK 465 GLY B 35 REMARK 465 MET B 36 REMARK 465 ALA B 37 REMARK 465 GLY B 38 REMARK 465 LEU B 39 REMARK 465 ALA B 40 REMARK 465 GLY B 41 REMARK 465 ALA B 42 REMARK 465 ALA B 43 REMARK 465 VAL B 44 REMARK 465 LYS B 45 REMARK 465 ASP B 46 REMARK 465 MET B 47 REMARK 465 ALA B 48 REMARK 465 ASP B 49 REMARK 465 ARG B 50 REMARK 465 MET B 51 REMARK 465 THR B 52 REMARK 465 SER B 53 REMARK 465 ASP B 54 REMARK 465 GLU B 55 REMARK 465 LEU B 56 REMARK 465 GLU B 57 REMARK 465 HIS B 58 REMARK 465 LEU B 59 REMARK 465 ILE B 60 REMARK 465 THR B 61 REMARK 465 LEU B 62 REMARK 465 GLN B 63 REMARK 465 MET B 64 REMARK 465 MET B 65 REMARK 465 GLY B 66 REMARK 465 ASN B 67 REMARK 465 ASP B 68 REMARK 465 GLU B 69 REMARK 465 ILE B 70 REMARK 465 THR B 71 REMARK 465 THR B 72 REMARK 465 LYS B 73 REMARK 465 TYR B 74 REMARK 465 LEU B 75 REMARK 465 SER B 76 REMARK 465 SER B 77 REMARK 465 LEU B 78 REMARK 465 HIS B 79 REMARK 465 ASP B 80 REMARK 465 LYS B 81 REMARK 465 TYR B 82 REMARK 465 GLY B 83 REMARK 465 SER B 84 REMARK 465 GLY B 85 REMARK 465 ALA B 86 REMARK 465 ALA B 87 REMARK 465 SER B 88 REMARK 465 ASN B 89 REMARK 465 PRO B 90 REMARK 465 ASN B 91 REMARK 465 ILE B 92 REMARK 465 GLY B 93 REMARK 465 LYS B 94 REMARK 465 ASP B 95 REMARK 465 LEU B 96 REMARK 465 THR B 97 REMARK 465 ASP B 98 REMARK 465 ALA B 99 REMARK 465 GLU B 100 REMARK 465 LYS B 101 REMARK 465 VAL B 102 REMARK 465 GLU B 103 REMARK 465 LEU B 104 REMARK 465 GLY B 105 REMARK 465 GLY B 106 REMARK 465 SER B 107 REMARK 465 GLY B 108 REMARK 465 SER B 109 REMARK 465 GLY B 110 REMARK 465 THR B 111 REMARK 465 GLY B 112 REMARK 465 THR B 113 REMARK 465 PRO B 114 REMARK 465 PRO B 115 REMARK 465 PRO B 116 REMARK 465 SER B 117 REMARK 465 GLU B 118 REMARK 465 ASN B 119 REMARK 465 ASP B 120 REMARK 465 PRO B 121 REMARK 465 LYS B 122 REMARK 465 GLN B 123 REMARK 465 GLN B 124 REMARK 465 ASN B 125 REMARK 465 GLU B 126 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP E 314 CG OD1 OD2 REMARK 470 LEU E 315 CG CD1 CD2 REMARK 470 VAL F 168 CG1 CG2 REMARK 470 LYS F 170 CG CD CE NZ REMARK 470 GLU F 171 CG CD OE1 OE2 REMARK 470 ASN F 172 CG OD1 ND2 REMARK 470 TYR F 175 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP A 314 CG OD1 OD2 REMARK 470 VAL B 168 CG1 CG2 REMARK 470 LYS B 170 CG CD CE NZ REMARK 470 GLU B 171 CG CD OE1 OE2 REMARK 470 ASN B 172 CG OD1 ND2 REMARK 470 TYR B 175 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TRP B 176 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 176 CZ3 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE E 39 37.39 70.53 REMARK 500 GLN E 142 70.07 56.69 REMARK 500 THR E 156 -63.99 -125.16 REMARK 500 TRP F 176 -20.71 79.17 REMARK 500 PHE A 39 36.52 70.31 REMARK 500 GLN A 142 70.16 57.47 REMARK 500 THR A 156 -64.09 -124.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5J5V RELATED DB: PDB REMARK 900 RELATED ID: 5J4A RELATED DB: PDB DBREF 5J43 E 1 323 UNP P0ABK6 CYSK_ECO57 1 323 DBREF 5J43 F 1 227 UNP Q0T963 CDIA_ECOL5 3016 3242 DBREF 5J43 A 1 323 UNP P0ABK6 CYSK_ECO57 1 323 DBREF 5J43 B 1 227 UNP Q0T963 CDIA_ECOL5 3016 3242 SEQADV 5J43 GLY E 2 UNP P0ABK6 SER 2 CONFLICT SEQADV 5J43 MET F -11 UNP Q0T963 INITIATING METHIONINE SEQADV 5J43 ALA F -10 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 LYS F -9 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 SER F -8 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 HIS F -7 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 HIS F -6 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 HIS F -5 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 HIS F -4 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 HIS F -3 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 HIS F -2 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 THR F -1 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 SER F 0 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 ALA F 178 UNP Q0T963 HIS 3193 ENGINEERED MUTATION SEQADV 5J43 GLY A 2 UNP P0ABK6 SER 2 CONFLICT SEQADV 5J43 MET B -11 UNP Q0T963 INITIATING METHIONINE SEQADV 5J43 ALA B -10 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 LYS B -9 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 SER B -8 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 HIS B -7 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 HIS B -6 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 HIS B -5 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 HIS B -4 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 HIS B -3 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 HIS B -2 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 THR B -1 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 SER B 0 UNP Q0T963 EXPRESSION TAG SEQADV 5J43 ALA B 178 UNP Q0T963 HIS 3193 ENGINEERED MUTATION SEQRES 1 E 323 MET GLY LYS ILE PHE GLU ASP ASN SER LEU THR ILE GLY SEQRES 2 E 323 HIS THR PRO LEU VAL ARG LEU ASN ARG ILE GLY ASN GLY SEQRES 3 E 323 ARG ILE LEU ALA LYS VAL GLU SER ARG ASN PRO SER PHE SEQRES 4 E 323 SER VAL LLP CYS ARG ILE GLY ALA ASN MET ILE TRP ASP SEQRES 5 E 323 ALA GLU LYS ARG GLY VAL LEU LYS PRO GLY VAL GLU LEU SEQRES 6 E 323 VAL GLU PRO THR SER GLY ASN THR GLY ILE ALA LEU ALA SEQRES 7 E 323 TYR VAL ALA ALA ALA ARG GLY TYR LYS LEU THR LEU THR SEQRES 8 E 323 MET PRO GLU THR MET SER ILE GLU ARG ARG LYS LEU LEU SEQRES 9 E 323 LYS ALA LEU GLY ALA ASN LEU VAL LEU THR GLU GLY ALA SEQRES 10 E 323 LYS GLY MET LYS GLY ALA ILE GLN LYS ALA GLU GLU ILE SEQRES 11 E 323 VAL ALA SER ASN PRO GLU LYS TYR LEU LEU LEU GLN GLN SEQRES 12 E 323 PHE SER ASN PRO ALA ASN PRO GLU ILE HIS GLU LYS THR SEQRES 13 E 323 THR GLY PRO GLU ILE TRP GLU ASP THR ASP GLY GLN VAL SEQRES 14 E 323 ASP VAL PHE ILE ALA GLY VAL GLY THR GLY GLY THR LEU SEQRES 15 E 323 THR GLY VAL SER ARG TYR ILE LYS GLY THR LYS GLY LYS SEQRES 16 E 323 THR ASP LEU ILE SER VAL ALA VAL GLU PRO THR ASP SER SEQRES 17 E 323 PRO VAL ILE ALA GLN ALA LEU ALA GLY GLU GLU ILE LYS SEQRES 18 E 323 PRO GLY PRO HIS LYS ILE GLN GLY ILE GLY ALA GLY PHE SEQRES 19 E 323 ILE PRO ALA ASN LEU ASP LEU LYS LEU VAL ASP LYS VAL SEQRES 20 E 323 ILE GLY ILE THR ASN GLU GLU ALA ILE SER THR ALA ARG SEQRES 21 E 323 ARG LEU MET GLU GLU GLU GLY ILE LEU ALA GLY ILE SER SEQRES 22 E 323 SER GLY ALA ALA VAL ALA ALA ALA LEU LYS LEU GLN GLU SEQRES 23 E 323 ASP GLU SER PHE THR ASN LYS ASN ILE VAL VAL ILE LEU SEQRES 24 E 323 PRO SER SER GLY GLU ARG TYR LEU SER THR ALA LEU PHE SEQRES 25 E 323 ALA ASP LEU PHE THR GLU LYS GLU LEU GLN GLN SEQRES 1 F 239 MET ALA LYS SER HIS HIS HIS HIS HIS HIS THR SER VAL SEQRES 2 F 239 GLU ASN ASN ALA LEU SER LEU VAL ALA ARG GLY CYS ALA SEQRES 3 F 239 VAL ALA ALA PRO CYS ARG THR LYS VAL ALA GLU GLN LEU SEQRES 4 F 239 LEU GLU ILE GLY ALA LYS ALA GLY MET ALA GLY LEU ALA SEQRES 5 F 239 GLY ALA ALA VAL LYS ASP MET ALA ASP ARG MET THR SER SEQRES 6 F 239 ASP GLU LEU GLU HIS LEU ILE THR LEU GLN MET MET GLY SEQRES 7 F 239 ASN ASP GLU ILE THR THR LYS TYR LEU SER SER LEU HIS SEQRES 8 F 239 ASP LYS TYR GLY SER GLY ALA ALA SER ASN PRO ASN ILE SEQRES 9 F 239 GLY LYS ASP LEU THR ASP ALA GLU LYS VAL GLU LEU GLY SEQRES 10 F 239 GLY SER GLY SER GLY THR GLY THR PRO PRO PRO SER GLU SEQRES 11 F 239 ASN ASP PRO LYS GLN GLN ASN GLU LYS THR VAL ASP LYS SEQRES 12 F 239 LEU ASN GLN LYS GLN GLU SER ALA ILE LYS LYS ILE ASP SEQRES 13 F 239 ASN THR ILE LYS ASN ALA LEU LYS ASP HIS ASP ILE ILE SEQRES 14 F 239 GLY THR LEU LYS ASP MET ASP GLY LYS PRO VAL PRO LYS SEQRES 15 F 239 GLU ASN GLY GLY TYR TRP ASP ALA MET GLN GLU MET GLN SEQRES 16 F 239 ASN THR LEU ARG GLY LEU ARG ASN HIS ALA ASP THR LEU SEQRES 17 F 239 LYS ASN VAL ASN ASN PRO GLU ALA GLN ALA ALA TYR GLY SEQRES 18 F 239 ARG ALA THR ASP ALA ILE ASN LYS ILE GLU SER ALA LEU SEQRES 19 F 239 LYS GLY TYR GLY ILE SEQRES 1 A 323 MET GLY LYS ILE PHE GLU ASP ASN SER LEU THR ILE GLY SEQRES 2 A 323 HIS THR PRO LEU VAL ARG LEU ASN ARG ILE GLY ASN GLY SEQRES 3 A 323 ARG ILE LEU ALA LYS VAL GLU SER ARG ASN PRO SER PHE SEQRES 4 A 323 SER VAL LLP CYS ARG ILE GLY ALA ASN MET ILE TRP ASP SEQRES 5 A 323 ALA GLU LYS ARG GLY VAL LEU LYS PRO GLY VAL GLU LEU SEQRES 6 A 323 VAL GLU PRO THR SER GLY ASN THR GLY ILE ALA LEU ALA SEQRES 7 A 323 TYR VAL ALA ALA ALA ARG GLY TYR LYS LEU THR LEU THR SEQRES 8 A 323 MET PRO GLU THR MET SER ILE GLU ARG ARG LYS LEU LEU SEQRES 9 A 323 LYS ALA LEU GLY ALA ASN LEU VAL LEU THR GLU GLY ALA SEQRES 10 A 323 LYS GLY MET LYS GLY ALA ILE GLN LYS ALA GLU GLU ILE SEQRES 11 A 323 VAL ALA SER ASN PRO GLU LYS TYR LEU LEU LEU GLN GLN SEQRES 12 A 323 PHE SER ASN PRO ALA ASN PRO GLU ILE HIS GLU LYS THR SEQRES 13 A 323 THR GLY PRO GLU ILE TRP GLU ASP THR ASP GLY GLN VAL SEQRES 14 A 323 ASP VAL PHE ILE ALA GLY VAL GLY THR GLY GLY THR LEU SEQRES 15 A 323 THR GLY VAL SER ARG TYR ILE LYS GLY THR LYS GLY LYS SEQRES 16 A 323 THR ASP LEU ILE SER VAL ALA VAL GLU PRO THR ASP SER SEQRES 17 A 323 PRO VAL ILE ALA GLN ALA LEU ALA GLY GLU GLU ILE LYS SEQRES 18 A 323 PRO GLY PRO HIS LYS ILE GLN GLY ILE GLY ALA GLY PHE SEQRES 19 A 323 ILE PRO ALA ASN LEU ASP LEU LYS LEU VAL ASP LYS VAL SEQRES 20 A 323 ILE GLY ILE THR ASN GLU GLU ALA ILE SER THR ALA ARG SEQRES 21 A 323 ARG LEU MET GLU GLU GLU GLY ILE LEU ALA GLY ILE SER SEQRES 22 A 323 SER GLY ALA ALA VAL ALA ALA ALA LEU LYS LEU GLN GLU SEQRES 23 A 323 ASP GLU SER PHE THR ASN LYS ASN ILE VAL VAL ILE LEU SEQRES 24 A 323 PRO SER SER GLY GLU ARG TYR LEU SER THR ALA LEU PHE SEQRES 25 A 323 ALA ASP LEU PHE THR GLU LYS GLU LEU GLN GLN SEQRES 1 B 239 MET ALA LYS SER HIS HIS HIS HIS HIS HIS THR SER VAL SEQRES 2 B 239 GLU ASN ASN ALA LEU SER LEU VAL ALA ARG GLY CYS ALA SEQRES 3 B 239 VAL ALA ALA PRO CYS ARG THR LYS VAL ALA GLU GLN LEU SEQRES 4 B 239 LEU GLU ILE GLY ALA LYS ALA GLY MET ALA GLY LEU ALA SEQRES 5 B 239 GLY ALA ALA VAL LYS ASP MET ALA ASP ARG MET THR SER SEQRES 6 B 239 ASP GLU LEU GLU HIS LEU ILE THR LEU GLN MET MET GLY SEQRES 7 B 239 ASN ASP GLU ILE THR THR LYS TYR LEU SER SER LEU HIS SEQRES 8 B 239 ASP LYS TYR GLY SER GLY ALA ALA SER ASN PRO ASN ILE SEQRES 9 B 239 GLY LYS ASP LEU THR ASP ALA GLU LYS VAL GLU LEU GLY SEQRES 10 B 239 GLY SER GLY SER GLY THR GLY THR PRO PRO PRO SER GLU SEQRES 11 B 239 ASN ASP PRO LYS GLN GLN ASN GLU LYS THR VAL ASP LYS SEQRES 12 B 239 LEU ASN GLN LYS GLN GLU SER ALA ILE LYS LYS ILE ASP SEQRES 13 B 239 ASN THR ILE LYS ASN ALA LEU LYS ASP HIS ASP ILE ILE SEQRES 14 B 239 GLY THR LEU LYS ASP MET ASP GLY LYS PRO VAL PRO LYS SEQRES 15 B 239 GLU ASN GLY GLY TYR TRP ASP ALA MET GLN GLU MET GLN SEQRES 16 B 239 ASN THR LEU ARG GLY LEU ARG ASN HIS ALA ASP THR LEU SEQRES 17 B 239 LYS ASN VAL ASN ASN PRO GLU ALA GLN ALA ALA TYR GLY SEQRES 18 B 239 ARG ALA THR ASP ALA ILE ASN LYS ILE GLU SER ALA LEU SEQRES 19 B 239 LYS GLY TYR GLY ILE MODRES 5J43 LLP E 42 LYS MODIFIED RESIDUE MODRES 5J43 LLP A 42 LYS MODIFIED RESIDUE HET LLP E 42 24 HET LLP A 42 24 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE FORMUL 1 LLP 2(C14 H22 N3 O7 P) FORMUL 5 HOH *110(H2 O) HELIX 1 AA1 ASP E 7 ILE E 12 5 6 HELIX 2 AA2 LLP E 42 ARG E 56 1 15 HELIX 3 AA3 GLY E 71 ARG E 84 1 14 HELIX 4 AA4 SER E 97 LEU E 107 1 11 HELIX 5 AA5 GLU E 115 ALA E 117 5 3 HELIX 6 AA6 LYS E 118 ASN E 134 1 17 HELIX 7 AA7 PRO E 147 THR E 156 1 10 HELIX 8 AA8 THR E 156 ASP E 166 1 11 HELIX 9 AA9 GLY E 179 LYS E 190 1 12 HELIX 10 AB1 PRO E 209 ALA E 216 1 8 HELIX 11 AB2 ASP E 240 VAL E 244 5 5 HELIX 12 AB3 THR E 251 GLY E 267 1 17 HELIX 13 AB4 GLY E 271 GLN E 285 1 15 HELIX 14 AB5 SER E 302 LEU E 307 5 6 HELIX 15 AB6 ASN F 133 ALA F 150 1 18 HELIX 16 AB7 LYS F 152 ASP F 164 1 13 HELIX 17 AB8 ASP F 177 LYS F 197 1 21 HELIX 18 AB9 ASN F 201 LYS F 223 1 23 HELIX 19 AC1 ASP A 7 ILE A 12 5 6 HELIX 20 AC2 LLP A 42 ARG A 56 1 15 HELIX 21 AC3 GLY A 71 ARG A 84 1 14 HELIX 22 AC4 SER A 97 LEU A 107 1 11 HELIX 23 AC5 GLU A 115 ALA A 117 5 3 HELIX 24 AC6 LYS A 118 ASN A 134 1 17 HELIX 25 AC7 PRO A 147 THR A 156 1 10 HELIX 26 AC8 THR A 156 ASP A 166 1 11 HELIX 27 AC9 GLY A 179 LYS A 190 1 12 HELIX 28 AD1 PRO A 209 ALA A 216 1 8 HELIX 29 AD2 ASP A 240 VAL A 244 5 5 HELIX 30 AD3 THR A 251 GLY A 267 1 17 HELIX 31 AD4 GLY A 271 GLN A 285 1 15 HELIX 32 AD5 SER A 302 LEU A 307 5 6 HELIX 33 AD6 ASN B 133 ALA B 150 1 18 HELIX 34 AD7 LYS B 152 ASP B 164 1 13 HELIX 35 AD8 ASP B 177 LYS B 197 1 21 HELIX 36 AD9 ASN B 201 LYS B 223 1 23 SHEET 1 AA1 6 LEU E 17 ARG E 19 0 SHEET 2 AA1 6 ILE E 28 VAL E 32 -1 O ALA E 30 N VAL E 18 SHEET 3 AA1 6 ILE E 295 LEU E 299 1 O ILE E 295 N LEU E 29 SHEET 4 AA1 6 VAL E 171 GLY E 175 1 N ILE E 173 O VAL E 296 SHEET 5 AA1 6 ILE E 199 PRO E 205 1 O ILE E 199 N PHE E 172 SHEET 6 AA1 6 LYS E 246 ILE E 250 1 O LYS E 246 N ALA E 202 SHEET 1 AA2 4 ASN E 110 THR E 114 0 SHEET 2 AA2 4 LEU E 88 PRO E 93 1 N LEU E 88 O ASN E 110 SHEET 3 AA2 4 GLU E 64 PRO E 68 1 N LEU E 65 O THR E 89 SHEET 4 AA2 4 TYR E 138 LEU E 140 1 O LEU E 139 N VAL E 66 SHEET 1 AA3 6 LEU A 17 ARG A 19 0 SHEET 2 AA3 6 ILE A 28 VAL A 32 -1 O ALA A 30 N VAL A 18 SHEET 3 AA3 6 ILE A 295 LEU A 299 1 O ILE A 295 N LEU A 29 SHEET 4 AA3 6 VAL A 171 GLY A 175 1 N VAL A 171 O VAL A 296 SHEET 5 AA3 6 ILE A 199 PRO A 205 1 O VAL A 201 N PHE A 172 SHEET 6 AA3 6 LYS A 246 ILE A 250 1 O LYS A 246 N ALA A 202 SHEET 1 AA4 4 ASN A 110 THR A 114 0 SHEET 2 AA4 4 LEU A 88 PRO A 93 1 N LEU A 90 O ASN A 110 SHEET 3 AA4 4 GLU A 64 PRO A 68 1 N LEU A 65 O THR A 89 SHEET 4 AA4 4 TYR A 138 LEU A 140 1 O LEU A 139 N VAL A 66 LINK C VAL E 41 N LLP E 42 1555 1555 1.33 LINK C LLP E 42 N CYS E 43 1555 1555 1.34 LINK C VAL A 41 N LLP A 42 1555 1555 1.33 LINK C LLP A 42 N CYS A 43 1555 1555 1.34 CISPEP 1 PRO F 167 VAL F 168 0 -7.33 CISPEP 2 LYS B 170 GLU B 171 0 -2.98 CISPEP 3 TRP B 176 ASP B 177 0 -16.58 CRYST1 64.010 64.010 365.370 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015623 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015623 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002737 0.00000 MASTER 557 0 2 36 20 0 0 6 0 0 0 88 END