HEADER DNA BINDING PROTEIN 02-FEB-16 5HZ7 TITLE HIGH-RESOLUTION CRYSTAL STRUCTURE OF THE MINOR DNA-BINDING PILIN COMP TITLE 2 FROM NEISSERIA MENINGITIDIS IN FUSION WITH MBP COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMP; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: COMP AS A C-TERMINAL FUSION TO MALTOSE BINDING PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS; SOURCE 3 ORGANISM_TAXID: 487; SOURCE 4 GENE: COMP; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TYPE IV PILIN, DNA TRANSFORMATION, DNA-BINDING, NEISSERIACEAE, DNA KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.-L.BERRY REVDAT 5 29-JUL-20 5HZ7 1 COMPND REMARK HET HETNAM REVDAT 5 2 1 HETSYN FORMUL LINK SITE REVDAT 5 3 1 ATOM REVDAT 4 30-AUG-17 5HZ7 1 REMARK REVDAT 3 15-JUN-16 5HZ7 1 JRNL REVDAT 2 25-MAY-16 5HZ7 1 JRNL REVDAT 1 18-MAY-16 5HZ7 0 JRNL AUTH J.L.BERRY,Y.XU,P.N.WARD,S.M.LEA,S.J.MATTHEWS,V.PELICIC JRNL TITL A COMPARATIVE STRUCTURE/FUNCTION ANALYSIS OF TWO TYPE IV JRNL TITL 2 PILIN DNA RECEPTORS DEFINES A NOVEL MODE OF DNA BINDING. JRNL REF STRUCTURE V. 24 926 2016 JRNL REFN ISSN 0969-2126 JRNL PMID 27161979 JRNL DOI 10.1016/J.STR.2016.04.001 REMARK 2 REMARK 2 RESOLUTION. 1.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.43 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 88369 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.270 REMARK 3 FREE R VALUE TEST SET COUNT : 2003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 58.0962 - 3.4463 0.98 6400 145 0.1566 0.1729 REMARK 3 2 3.4463 - 2.7354 0.99 6240 140 0.1586 0.1767 REMARK 3 3 2.7354 - 2.3896 1.00 6224 144 0.1500 0.2056 REMARK 3 4 2.3896 - 2.1711 1.00 6209 148 0.1382 0.1733 REMARK 3 5 2.1711 - 2.0155 0.99 6161 143 0.1395 0.1810 REMARK 3 6 2.0155 - 1.8967 1.00 6167 146 0.1423 0.1836 REMARK 3 7 1.8967 - 1.8017 1.00 6159 136 0.1472 0.1942 REMARK 3 8 1.8017 - 1.7232 1.00 6158 146 0.1562 0.2230 REMARK 3 9 1.7232 - 1.6569 1.00 6125 138 0.1639 0.2384 REMARK 3 10 1.6569 - 1.5997 1.00 6154 142 0.1706 0.2451 REMARK 3 11 1.5997 - 1.5497 1.00 6089 152 0.1849 0.2049 REMARK 3 12 1.5497 - 1.5054 0.99 6120 127 0.2059 0.2909 REMARK 3 13 1.5054 - 1.4658 0.99 6100 153 0.2339 0.2858 REMARK 3 14 1.4658 - 1.4300 0.99 6060 143 0.2805 0.3528 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3949 REMARK 3 ANGLE : 0.744 5371 REMARK 3 CHIRALITY : 0.064 597 REMARK 3 PLANARITY : 0.004 693 REMARK 3 DIHEDRAL : 11.439 1414 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HZ7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000217967. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 88446 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.430 REMARK 200 RESOLUTION RANGE LOW (A) : 58.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.09600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1HSJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CACODYLATE, 25% PEG 4000, REMARK 280 PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.78500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.79000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.22000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.79000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.78500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.22000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 LYS A 2 CE NZ REMARK 470 LYS A 26 CD CE NZ REMARK 470 LYS A 35 CD CE NZ REMARK 470 THR A 37 O REMARK 470 LYS A 103 NZ REMARK 470 ILE A 133 CD1 REMARK 470 LEU A 136 CD2 REMARK 470 LYS A 143 CE NZ REMARK 470 LYS A 171 CE NZ REMARK 470 LYS A 180 CD CE NZ REMARK 470 LYS A 190 NZ REMARK 470 THR A 194 OG1 REMARK 470 LEU A 196 CD1 REMARK 470 LYS A 201 CG CD CE NZ REMARK 470 LYS A 203 NZ REMARK 470 ASN A 206 OD1 ND2 REMARK 470 LYS A 252 NZ REMARK 470 GLU A 289 CG CD OE1 OE2 REMARK 470 LYS A 296 CE NZ REMARK 470 ARG A 355 NE CZ NH1 NH2 REMARK 470 ARG A 403 NH2 REMARK 470 LYS A 410 CE NZ REMARK 470 ILE A 429 CD1 REMARK 470 ILE A 464 CD1 REMARK 470 LYS A 466 NZ REMARK 470 LYS A 467 CE NZ REMARK 470 LYS A 484 NZ REMARK 470 LYS A 490 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER A 338 O HOH A 612 1.57 REMARK 500 OD1 ASP A 42 O HOH A 601 1.88 REMARK 500 O HOH A 659 O HOH A 1105 1.98 REMARK 500 O HOH A 836 O HOH A 1094 2.00 REMARK 500 O HOH A 608 O HOH A 1121 2.02 REMARK 500 O HOH A 1062 O HOH A 1155 2.02 REMARK 500 O HOH A 1043 O HOH A 1183 2.03 REMARK 500 O HOH A 1091 O HOH A 1225 2.06 REMARK 500 O HOH A 1109 O HOH A 1281 2.06 REMARK 500 O HOH A 903 O HOH A 941 2.06 REMARK 500 O HOH A 618 O HOH A 777 2.07 REMARK 500 O HOH A 1210 O HOH A 1301 2.07 REMARK 500 O HOH A 712 O HOH A 1119 2.08 REMARK 500 O4 GLC B 3 O5 BGC A 504 2.09 REMARK 500 O HOH A 1040 O HOH A 1071 2.11 REMARK 500 O HOH A 1051 O HOH A 1281 2.12 REMARK 500 O HOH A 973 O HOH A 1278 2.12 REMARK 500 OE2 GLU A 418 O HOH A 602 2.13 REMARK 500 O GLY A 253 O HOH A 603 2.13 REMARK 500 O HOH A 860 O HOH A 1064 2.15 REMARK 500 O HOH A 608 O HOH A 668 2.15 REMARK 500 O HOH A 1032 O HOH A 1055 2.15 REMARK 500 O HOH A 1107 O HOH A 1191 2.17 REMARK 500 O HOH A 1166 O HOH A 1211 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 654 O HOH A 1080 1655 1.92 REMARK 500 O HOH A 1136 O HOH A 1204 1455 1.92 REMARK 500 O HOH A 865 O HOH A 991 3545 2.05 REMARK 500 O HOH A 1110 O HOH A 1144 1455 2.15 REMARK 500 O HOH A 842 O HOH A 1257 3555 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 56 -167.88 -103.62 REMARK 500 ALA A 169 -78.34 -82.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1308 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A1309 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH A1310 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A1311 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH A1312 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A1313 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH A1314 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH A1315 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH A1316 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH A1317 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH A1318 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH A1319 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH A1320 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A1321 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH A1322 DISTANCE = 6.93 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 BGC A 504 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 506 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 79 OE2 REMARK 620 2 ILE A 80 O 110.6 REMARK 620 3 HOH A1252 O 116.6 112.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 505 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 282 OE1 REMARK 620 2 HOH A1078 O 108.0 REMARK 620 3 HOH A1197 O 90.3 97.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 507 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 295 OD1 REMARK 620 2 GLY A 301 O 115.4 REMARK 620 3 HOH A 948 O 81.9 142.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 509 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 319 O REMARK 620 2 HOH A 898 O 134.3 REMARK 620 3 HOH A1195 O 97.8 93.9 REMARK 620 4 HOH A1229 O 118.8 98.5 108.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 508 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 767 O REMARK 620 2 HOH A 770 O 128.1 REMARK 620 3 HOH A1032 O 133.5 93.7 REMARK 620 N 1 2 DBREF 5HZ7 A 1 490 PDB 5HZ7 5HZ7 1 490 SEQRES 1 A 490 MET LYS ILE GLU GLU GLY LYS LEU VAL ILE TRP ILE ASN SEQRES 2 A 490 GLY ASP LYS GLY TYR ASN GLY LEU ALA GLU VAL GLY LYS SEQRES 3 A 490 LYS PHE GLU LYS ASP THR GLY ILE LYS VAL THR VAL GLU SEQRES 4 A 490 HIS PRO ASP LYS LEU GLU GLU LYS PHE PRO GLN VAL ALA SEQRES 5 A 490 ALA THR GLY ASP GLY PRO ASP ILE ILE PHE TRP ALA HIS SEQRES 6 A 490 ASP ARG PHE GLY GLY TYR ALA GLN SER GLY LEU LEU ALA SEQRES 7 A 490 GLU ILE THR PRO ALA ALA ALA PHE GLN ASP LYS LEU TYR SEQRES 8 A 490 PRO PHE THR TRP ASP ALA VAL ARG TYR ASN GLY LYS LEU SEQRES 9 A 490 ILE ALA TYR PRO ILE ALA VAL GLU ALA LEU SER LEU ILE SEQRES 10 A 490 TYR ASN LYS ASP LEU LEU PRO ASN PRO PRO LYS THR TRP SEQRES 11 A 490 GLU GLU ILE PRO ALA LEU ASP LYS GLU LEU LYS ALA LYS SEQRES 12 A 490 GLY LYS SER ALA LEU MET PHE ASN LEU GLN GLU PRO TYR SEQRES 13 A 490 PHE THR TRP PRO LEU ILE ALA ALA ASP GLY GLY TYR ALA SEQRES 14 A 490 PHE LYS TYR ALA ALA GLY LYS TYR ASP ILE LYS ASP VAL SEQRES 15 A 490 GLY VAL ASP ASN ALA GLY ALA LYS ALA GLY LEU THR PHE SEQRES 16 A 490 LEU VAL ASP LEU ILE LYS ASN LYS HIS MET ASN ALA ASP SEQRES 17 A 490 THR ASP TYR SER ILE ALA GLU ALA ALA PHE ASN LYS GLY SEQRES 18 A 490 GLU THR ALA MET THR ILE ASN GLY PRO TRP ALA TRP SER SEQRES 19 A 490 ASN ILE ASP THR SER ALA VAL ASN TYR GLY VAL THR VAL SEQRES 20 A 490 LEU PRO THR PHE LYS GLY GLN PRO SER LYS PRO PHE VAL SEQRES 21 A 490 GLY VAL LEU SER ALA GLY ILE ASN ALA ALA SER PRO ASN SEQRES 22 A 490 LYS GLU LEU ALA LYS GLU PHE LEU GLU ASN TYR LEU LEU SEQRES 23 A 490 THR ASP GLU GLY LEU GLU ALA VAL ASN LYS ASP LYS PRO SEQRES 24 A 490 LEU GLY ALA VAL ALA LEU LYS SER TYR GLU GLU GLU LEU SEQRES 25 A 490 ALA LYS ASP PRO ARG ILE ALA ALA THR MET GLU ASN ALA SEQRES 26 A 490 GLN LYS GLY GLU ILE MET PRO ASN ILE PRO GLN MET SER SEQRES 27 A 490 ALA PHE TRP TYR ALA VAL ARG THR ALA VAL ILE ASN ALA SEQRES 28 A 490 ALA SER GLY ARG GLN THR VAL ASP ALA ALA LEU ALA ALA SEQRES 29 A 490 ALA GLN THR ASN ALA ALA ALA ALA SER GLU PHE GLU LYS SEQRES 30 A 490 ALA LYS ILE ASN ALA VAL ARG ALA ALA LEU LEU GLU ASN SEQRES 31 A 490 ALA HIS PHE MET GLU LYS PHE TYR LEU GLN ASN GLY ARG SEQRES 32 A 490 PHE LYS GLN THR SER THR LYS TRP PRO SER LEU PRO ILE SEQRES 33 A 490 LYS GLU ALA GLU GLY PHE CYS ILE ARG LEU ASN GLY ILE SEQRES 34 A 490 ALA ARG GLY ALA LEU ASP SER LYS PHE MET LEU LYS ALA SEQRES 35 A 490 VAL ALA ILE ASP LYS ASP LYS ASN PRO PHE ILE ILE LYS SEQRES 36 A 490 MET ASN GLU ASN LEU VAL THR PHE ILE CYS LYS LYS SER SEQRES 37 A 490 ALA SER SER CYS SER ASP GLY LEU ASP TYR PHE LYS GLY SEQRES 38 A 490 ASN ASP LYS ASP CYS LYS LEU PHE LYS HET GLC B 1 23 HET GLC B 2 21 HET GLC B 3 22 HET EDO A 502 10 HET EDO A 503 10 HET BGC A 504 22 HET NA A 505 1 HET NA A 506 1 HET NA A 507 1 HET NA A 508 1 HET NA A 509 1 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM NA SODIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 GLC 3(C6 H12 O6) FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 BGC C6 H12 O6 FORMUL 6 NA 5(NA 1+) FORMUL 11 HOH *722(H2 O) HELIX 1 AA1 GLY A 17 GLY A 33 1 17 HELIX 2 AA2 LYS A 43 ALA A 53 1 11 HELIX 3 AA3 ARG A 67 SER A 74 1 8 HELIX 4 AA4 ALA A 83 ASP A 88 1 6 HELIX 5 AA5 TYR A 91 VAL A 98 1 8 HELIX 6 AA6 THR A 129 GLU A 131 5 3 HELIX 7 AA7 GLU A 132 ALA A 142 1 11 HELIX 8 AA8 GLU A 154 ASP A 165 1 12 HELIX 9 AA9 ASN A 186 ASN A 202 1 17 HELIX 10 AB1 ASP A 210 LYS A 220 1 11 HELIX 11 AB2 GLY A 229 TRP A 231 5 3 HELIX 12 AB3 ALA A 232 SER A 239 1 8 HELIX 13 AB4 ASN A 273 TYR A 284 1 12 HELIX 14 AB5 THR A 287 LYS A 298 1 12 HELIX 15 AB6 LEU A 305 ALA A 313 1 9 HELIX 16 AB7 ASP A 315 GLY A 328 1 14 HELIX 17 AB8 GLN A 336 SER A 353 1 18 HELIX 18 AB9 THR A 357 ALA A 371 1 15 HELIX 19 AC1 SER A 373 GLY A 402 1 30 SHEET 1 AA1 2 LYS A 7 LEU A 8 0 SHEET 2 AA1 2 LYS A 35 VAL A 36 1 O LYS A 35 N LEU A 8 SHEET 1 AA2 5 ILE A 10 TRP A 11 0 SHEET 2 AA2 5 ILE A 60 ALA A 64 1 O PHE A 62 N TRP A 11 SHEET 3 AA2 5 PHE A 259 ILE A 267 -1 O GLY A 266 N ILE A 61 SHEET 4 AA2 5 TYR A 107 GLU A 112 -1 N GLU A 112 O GLY A 261 SHEET 5 AA2 5 ALA A 302 VAL A 303 -1 O ALA A 302 N VAL A 111 SHEET 1 AA3 4 ILE A 10 TRP A 11 0 SHEET 2 AA3 4 ILE A 60 ALA A 64 1 O PHE A 62 N TRP A 11 SHEET 3 AA3 4 PHE A 259 ILE A 267 -1 O GLY A 266 N ILE A 61 SHEET 4 AA3 4 GLU A 329 ILE A 330 1 O GLU A 329 N VAL A 260 SHEET 1 AA4 2 ARG A 99 TYR A 100 0 SHEET 2 AA4 2 LYS A 103 LEU A 104 -1 O LYS A 103 N TYR A 100 SHEET 1 AA5 4 SER A 146 LEU A 148 0 SHEET 2 AA5 4 THR A 223 ASN A 228 1 O ALA A 224 N SER A 146 SHEET 3 AA5 4 SER A 115 ASN A 119 -1 N ILE A 117 O THR A 226 SHEET 4 AA5 4 TYR A 243 THR A 246 -1 O THR A 246 N LEU A 116 SHEET 1 AA6 2 TYR A 168 ALA A 173 0 SHEET 2 AA6 2 LYS A 176 GLY A 183 -1 O ASP A 178 N LYS A 171 SHEET 1 AA7 3 GLU A 418 ALA A 419 0 SHEET 2 AA7 3 PHE A 422 ASN A 427 -1 O PHE A 422 N ALA A 419 SHEET 3 AA7 3 TYR A 478 PHE A 479 1 O PHE A 479 N LEU A 426 SHEET 1 AA8 6 GLU A 418 ALA A 419 0 SHEET 2 AA8 6 PHE A 422 ASN A 427 -1 O PHE A 422 N ALA A 419 SHEET 3 AA8 6 MET A 439 ALA A 444 -1 O MET A 439 N ASN A 427 SHEET 4 AA8 6 ILE A 453 ASN A 457 -1 O ILE A 454 N ALA A 442 SHEET 5 AA8 6 THR A 462 LYS A 467 -1 O CYS A 465 N ILE A 453 SHEET 6 AA8 6 LYS A 484 LEU A 488 -1 O LYS A 484 N LYS A 467 SSBOND 1 CYS A 423 CYS A 472 1555 1555 2.03 SSBOND 2 CYS A 465 CYS A 486 1555 1555 2.04 LINK O4 GLC B 1 C1 GLC B 2 1555 1555 1.39 LINK O4 GLC B 2 C1 GLC B 3 1555 1555 1.39 LINK OE2 GLU A 79 NA NA A 506 1555 1555 2.71 LINK O ILE A 80 NA NA A 506 1555 1555 2.80 LINK OE1 GLU A 282 NA NA A 505 1555 1555 2.82 LINK OD1 ASN A 295 NA NA A 507 1555 1555 2.66 LINK O GLY A 301 NA NA A 507 1555 1555 2.85 LINK O ALA A 319 NA NA A 509 1555 1555 2.68 LINK NA NA A 505 O HOH A1078 1555 1555 2.69 LINK NA NA A 505 O HOH A1197 1555 1555 2.81 LINK NA NA A 506 O HOH A1252 1555 1555 2.84 LINK NA NA A 507 O HOH A 948 1555 1555 2.93 LINK NA NA A 508 O HOH A 767 1555 1555 3.13 LINK NA NA A 508 O HOH A 770 1555 1555 2.80 LINK NA NA A 508 O HOH A1032 1555 3555 3.03 LINK NA NA A 509 O HOH A 898 1555 1555 2.48 LINK NA NA A 509 O HOH A1195 1555 1555 2.67 LINK NA NA A 509 O HOH A1229 1555 1555 2.27 CRYST1 63.570 68.440 109.580 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015731 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014611 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009126 0.00000 MASTER 393 0 11 19 28 0 0 6 0 0 0 38 END