HEADER PEPTIDE BINDING PROTEIN 06-JAN-16 5HFE TITLE THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95 (G330T, H372A TITLE 2 DOUBLE MUTANT) IN COMPLEX WITH A C-TERMINAL PEPTIDE DERIVED FROM TITLE 3 CRIPT COMPND MOL_ID: 1; COMPND 2 MOLECULE: DISKS LARGE HOMOLOG 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PDZ-3 DOMAIN (UNP RESIDUES 302-402); COMPND 5 SYNONYM: POSTSYNAPTIC DENSITY PROTEIN 95,PSD-95,SYNAPSE-ASSOCIATED COMPND 6 PROTEIN 90,SAP90; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: CYSTEINE-RICH PDZ-BINDING PROTEIN; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: PDZ3-BINDING DOMAIN (UNP RESIDUES 93-101); COMPND 13 SYNONYM: CYSTEINE-RICH INTERACTOR OF PDZ THREE,CYSTEINE-RICH COMPND 14 INTERACTOR OF PDZ3; COMPND 15 ENGINEERED: YES; COMPND 16 OTHER_DETAILS: SYNTHESIZED USING STANDARD FMOC CHEMISTRY, HPCL COMPND 17 PURIFIED, AND LYOPHILIZED. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: DLG4, DLGH4, PSD95; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-4T-1; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 14 ORGANISM_COMMON: RAT; SOURCE 15 ORGANISM_TAXID: 10116 KEYWDS PDZ, GLGF, DHR, ADHESION, SYNAPSE, SYNAPTIC DENSITY, PEPTIDE-BINDING KEYWDS 2 DOMAIN, PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.I.WHITE,A.S.RAMAN,R.RANGANATHAN REVDAT 1 11-JAN-17 5HFE 0 JRNL AUTH K.I.WHITE,A.S.RAMAN,R.RANGANATHAN JRNL TITL THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95 JRNL TITL 2 (G330T, H372A DOUBLE MUTANT) IN COMPLEX WITH A C-TERMINAL JRNL TITL 3 PEPTIDE DERIVED FROM CRIPT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2026 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.480 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 11944 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1195 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1478 - 3.7434 1.00 1322 148 0.1768 0.1999 REMARK 3 2 3.7434 - 2.9715 1.00 1227 136 0.1613 0.1839 REMARK 3 3 2.9715 - 2.5960 1.00 1209 134 0.1615 0.2100 REMARK 3 4 2.5960 - 2.3587 1.00 1174 131 0.1663 0.2098 REMARK 3 5 2.3587 - 2.1896 1.00 1181 130 0.1669 0.2082 REMARK 3 6 2.1896 - 2.0605 1.00 1186 132 0.1770 0.2303 REMARK 3 7 2.0605 - 1.9573 1.00 1169 130 0.1825 0.2321 REMARK 3 8 1.9573 - 1.8721 1.00 1163 130 0.2067 0.2443 REMARK 3 9 1.8721 - 1.8001 0.95 1118 124 0.2858 0.3280 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.530 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 1080 REMARK 3 ANGLE : 1.414 1473 REMARK 3 CHIRALITY : 0.083 163 REMARK 3 PLANARITY : 0.008 205 REMARK 3 DIHEDRAL : 15.186 405 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 299:325) REMARK 3 ORIGIN FOR THE GROUP (A): 45.1570 66.7224 38.0435 REMARK 3 T TENSOR REMARK 3 T11: 0.1529 T22: 0.1338 REMARK 3 T33: 0.1435 T12: -0.0119 REMARK 3 T13: -0.0284 T23: 0.0347 REMARK 3 L TENSOR REMARK 3 L11: 0.2307 L22: 0.0267 REMARK 3 L33: 0.0989 L12: 0.0105 REMARK 3 L13: -0.1419 L23: 0.0299 REMARK 3 S TENSOR REMARK 3 S11: 0.0137 S12: 0.0855 S13: 0.1408 REMARK 3 S21: 0.0897 S22: 0.0109 S23: -0.0294 REMARK 3 S31: -0.1732 S32: 0.0400 S33: 0.0504 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 326:338) REMARK 3 ORIGIN FOR THE GROUP (A): 37.2002 52.8201 29.2695 REMARK 3 T TENSOR REMARK 3 T11: 0.1829 T22: 0.1399 REMARK 3 T33: 0.1487 T12: -0.0354 REMARK 3 T13: 0.0109 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.0149 L22: 0.0036 REMARK 3 L33: -0.0008 L12: -0.0017 REMARK 3 L13: 0.0032 L23: 0.0001 REMARK 3 S TENSOR REMARK 3 S11: -0.1323 S12: 0.1237 S13: -0.1515 REMARK 3 S21: 0.1786 S22: 0.1002 S23: 0.0669 REMARK 3 S31: 0.0631 S32: -0.0545 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 339:354) REMARK 3 ORIGIN FOR THE GROUP (A): 45.4228 66.4998 30.6708 REMARK 3 T TENSOR REMARK 3 T11: 0.1636 T22: 0.1091 REMARK 3 T33: 0.1536 T12: -0.0278 REMARK 3 T13: 0.0126 T23: 0.0351 REMARK 3 L TENSOR REMARK 3 L11: 0.1739 L22: 0.0121 REMARK 3 L33: 0.1614 L12: 0.0227 REMARK 3 L13: 0.1597 L23: 0.0271 REMARK 3 S TENSOR REMARK 3 S11: 0.1720 S12: 0.0295 S13: 0.0927 REMARK 3 S21: 0.2839 S22: -0.1649 S23: -0.0969 REMARK 3 S31: 0.0096 S32: 0.1765 S33: 0.0180 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 355:396) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5693 59.9633 32.1539 REMARK 3 T TENSOR REMARK 3 T11: 0.1089 T22: 0.1689 REMARK 3 T33: 0.1064 T12: 0.0011 REMARK 3 T13: -0.0087 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 0.2127 L22: 0.1038 REMARK 3 L33: 0.4105 L12: 0.0258 REMARK 3 L13: -0.2920 L23: 0.0305 REMARK 3 S TENSOR REMARK 3 S11: -0.0270 S12: 0.0736 S13: -0.0033 REMARK 3 S21: 0.0324 S22: 0.0502 S23: 0.0227 REMARK 3 S31: 0.0895 S32: -0.1920 S33: -0.0091 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 397:415) REMARK 3 ORIGIN FOR THE GROUP (A): 51.3564 50.8540 36.2422 REMARK 3 T TENSOR REMARK 3 T11: 0.2245 T22: 0.1769 REMARK 3 T33: 0.1776 T12: 0.0217 REMARK 3 T13: -0.0057 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.0415 L22: 0.0522 REMARK 3 L33: 0.0321 L12: 0.0501 REMARK 3 L13: -0.0396 L23: -0.0378 REMARK 3 S TENSOR REMARK 3 S11: -0.0577 S12: 0.0294 S13: 0.0339 REMARK 3 S21: 0.0451 S22: 0.0367 S23: -0.0511 REMARK 3 S31: 0.2335 S32: 0.1816 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7392 52.7643 23.1293 REMARK 3 T TENSOR REMARK 3 T11: 0.2864 T22: 0.1960 REMARK 3 T33: 0.1967 T12: -0.0116 REMARK 3 T13: 0.0117 T23: -0.0306 REMARK 3 L TENSOR REMARK 3 L11: 0.0484 L22: 0.0388 REMARK 3 L33: 0.0393 L12: -0.0285 REMARK 3 L13: 0.0189 L23: -0.0379 REMARK 3 S TENSOR REMARK 3 S11: -0.0489 S12: 0.1996 S13: 0.0286 REMARK 3 S21: -0.0268 S22: -0.0679 S23: 0.0004 REMARK 3 S31: 0.2999 S32: 0.0040 S33: -0.0022 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HFE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000216948. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11944 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 40.138 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 18.10 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 50.5390 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.59400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.815 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1BE9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEPTIDE WAS INCLUDED IN PROTEIN BUFFER REMARK 280 TO A FINAL MOLAR RATIO OF 2:1 RELATIVE TO PROTEIN. RESERVOIR REMARK 280 SOLUTION CONTAINED 1.25 M SODIUM CITRATE, PH 7.0. EQUAL AMOUNTS REMARK 280 (1.5 MICROLITERS) OF PROTEIN (9 MG/ML) AND RESERVOIR SOLUTION REMARK 280 WERE MIXED AND EQUILLIBRATED AGAINST 500 MICROLITERS OF REMARK 280 CRYSTALLIZATION BUFFER., VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 44.87550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.87550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.87550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.87550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.87550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.87550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 44.87550 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 44.87550 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 44.87550 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 44.87550 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 44.87550 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 44.87550 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 44.87550 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 44.87550 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 44.87550 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 44.87550 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 44.87550 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 44.87550 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 67.31325 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 22.43775 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 22.43775 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 67.31325 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 67.31325 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 67.31325 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 22.43775 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 22.43775 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 67.31325 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 22.43775 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 67.31325 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 22.43775 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 67.31325 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 22.43775 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 22.43775 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 22.43775 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 67.31325 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 22.43775 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 67.31325 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 67.31325 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 67.31325 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 22.43775 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 22.43775 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 67.31325 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 67.31325 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 22.43775 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 22.43775 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 22.43775 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 22.43775 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 67.31325 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 22.43775 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 67.31325 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 22.43775 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 67.31325 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 67.31325 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 67.31325 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 585 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 101 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 109 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 331 CG CD OE1 OE2 REMARK 470 ARG A 399 CD NE CZ NH1 NH2 REMARK 470 LYS B 2 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 305 HH12 ARG A 411 1.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 407 CB - CG - OD2 ANGL. DEV. = 7.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 320 55.05 -118.47 REMARK 500 SER A 320 54.88 -118.47 REMARK 500 ASN B 3 -16.49 71.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 302 GLY A 303 -123.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1BE9 RELATED DB: PDB REMARK 900 RELATED ID: 5HDY RELATED DB: PDB REMARK 900 RELATED ID: 5HEB RELATED DB: PDB REMARK 900 RELATED ID: 5HED RELATED DB: PDB REMARK 900 RELATED ID: 5HET RELATED DB: PDB REMARK 900 RELATED ID: 5HEY RELATED DB: PDB REMARK 900 RELATED ID: 5HF1 RELATED DB: PDB REMARK 900 RELATED ID: 5HF4 RELATED DB: PDB REMARK 900 RELATED ID: 5HFB RELATED DB: PDB REMARK 900 RELATED ID: 5HFC RELATED DB: PDB REMARK 900 RELATED ID: 5HFD RELATED DB: PDB REMARK 900 RELATED ID: 5HFF RELATED DB: PDB DBREF 5HFE A 302 402 UNP P31016 DLG4_RAT 302 402 DBREF 5HFE B 1 9 UNP Q792Q4 CRIPT_RAT 93 101 SEQADV 5HFE GLY A 297 UNP P31016 EXPRESSION TAG SEQADV 5HFE SER A 298 UNP P31016 EXPRESSION TAG SEQADV 5HFE PRO A 299 UNP P31016 EXPRESSION TAG SEQADV 5HFE GLU A 300 UNP P31016 EXPRESSION TAG SEQADV 5HFE PHE A 301 UNP P31016 EXPRESSION TAG SEQADV 5HFE THR A 330 UNP P31016 GLY 330 ENGINEERED MUTATION SEQADV 5HFE ALA A 372 UNP P31016 HIS 372 ENGINEERED MUTATION SEQADV 5HFE ASN A 403 UNP P31016 EXPRESSION TAG SEQADV 5HFE SER A 404 UNP P31016 EXPRESSION TAG SEQADV 5HFE ARG A 405 UNP P31016 EXPRESSION TAG SEQADV 5HFE VAL A 406 UNP P31016 EXPRESSION TAG SEQADV 5HFE ASP A 407 UNP P31016 EXPRESSION TAG SEQADV 5HFE SER A 408 UNP P31016 EXPRESSION TAG SEQADV 5HFE SER A 409 UNP P31016 EXPRESSION TAG SEQADV 5HFE GLY A 410 UNP P31016 EXPRESSION TAG SEQADV 5HFE ARG A 411 UNP P31016 EXPRESSION TAG SEQADV 5HFE ILE A 412 UNP P31016 EXPRESSION TAG SEQADV 5HFE VAL A 413 UNP P31016 EXPRESSION TAG SEQADV 5HFE THR A 414 UNP P31016 EXPRESSION TAG SEQADV 5HFE ASP A 415 UNP P31016 EXPRESSION TAG SEQRES 1 A 119 GLY SER PRO GLU PHE LEU GLY GLU GLU ASP ILE PRO ARG SEQRES 2 A 119 GLU PRO ARG ARG ILE VAL ILE HIS ARG GLY SER THR GLY SEQRES 3 A 119 LEU GLY PHE ASN ILE VAL GLY THR GLU ASP GLY GLU GLY SEQRES 4 A 119 ILE PHE ILE SER PHE ILE LEU ALA GLY GLY PRO ALA ASP SEQRES 5 A 119 LEU SER GLY GLU LEU ARG LYS GLY ASP GLN ILE LEU SER SEQRES 6 A 119 VAL ASN GLY VAL ASP LEU ARG ASN ALA SER ALA GLU GLN SEQRES 7 A 119 ALA ALA ILE ALA LEU LYS ASN ALA GLY GLN THR VAL THR SEQRES 8 A 119 ILE ILE ALA GLN TYR LYS PRO GLU GLU TYR SER ARG PHE SEQRES 9 A 119 GLU ALA ASN SER ARG VAL ASP SER SER GLY ARG ILE VAL SEQRES 10 A 119 THR ASP SEQRES 1 B 9 THR LYS ASN TYR LYS GLN THR SER VAL FORMUL 3 HOH *125(H2 O) HELIX 1 AA1 PHE A 301 GLU A 305 5 5 HELIX 2 AA2 GLY A 345 GLY A 351 1 7 HELIX 3 AA3 SER A 371 ASN A 381 1 11 HELIX 4 AA4 LYS A 393 ARG A 399 1 7 SHEET 1 AA1 4 ARG A 312 HIS A 317 0 SHEET 2 AA1 4 THR A 385 TYR A 392 -1 O ILE A 388 N ILE A 314 SHEET 3 AA1 4 ASP A 357 VAL A 362 -1 N GLN A 358 O GLN A 391 SHEET 4 AA1 4 VAL A 365 ASP A 366 -1 O VAL A 365 N VAL A 362 SHEET 1 AA2 3 PHE A 337 ILE A 341 0 SHEET 2 AA2 3 PHE A 325 THR A 330 -1 N VAL A 328 O PHE A 337 SHEET 3 AA2 3 TYR B 4 SER B 8 -1 O LYS B 5 N GLY A 329 SHEET 1 AA3 2 SER A 404 VAL A 406 0 SHEET 2 AA3 2 ILE A 412 THR A 414 -1 O VAL A 413 N ARG A 405 CISPEP 1 GLY A 297 SER A 298 0 6.46 CRYST1 89.751 89.751 89.751 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011142 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011142 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011142 0.00000 MASTER 477 0 0 4 9 0 0 6 0 0 0 11 END