HEADER OXIDOREDUCTASE 19-AUG-16 5GT9 TITLE THE X-RAY STRUCTURE OF 7BETA-HYDROXYSTEROID DEHYDROGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXIDOREDUCTASE, SHORT CHAIN DEHYDROGENASE/REDUCTASE FAMILY COMPND 3 PROTEIN; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COLLINSELLA AEROFACIENS ATCC 25986; SOURCE 3 ORGANISM_TAXID: 411903; SOURCE 4 STRAIN: ATCC 25986; SOURCE 5 ATCC: 25986; SOURCE 6 GENE: COLAER_02088; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS SHORT CHAIN DEHYDROGENASE, STEROID SUBSTRATES, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR F.WANG,R.WANG,Z.LV,Q.CHEN,X.HUO REVDAT 1 17-MAY-17 5GT9 0 JRNL AUTH R.WANG,J.WU,D.K.JIN,Y.CHEN,Z.LV,Q.CHEN,Q.MIAO,X.HUO,F.WANG JRNL TITL STRUCTURE OF NADP(+)-BOUND 7 BETA-HYDROXYSTEROID JRNL TITL 2 DEHYDROGENASE REVEALS TWO COFACTOR-BINDING MODES JRNL REF ACTA CRYSTALLOGR F STRUCT V. 73 246 2017 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 2053-230X JRNL PMID 28471355 JRNL DOI 10.1107/S2053230X17004460 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 48520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2566 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3335 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.1770 REMARK 3 BIN FREE R VALUE SET COUNT : 176 REMARK 3 BIN FREE R VALUE : 0.2430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4019 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 202 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.107 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.104 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.953 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4244 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3965 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5756 ; 1.809 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9146 ; 0.843 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 535 ; 6.625 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 183 ;35.784 ;24.536 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 718 ;15.099 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;16.520 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 630 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4792 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 963 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2110 ; 1.723 ; 1.465 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2109 ; 1.721 ; 1.464 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2637 ; 2.474 ; 2.190 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2638 ; 2.473 ; 2.191 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2134 ; 2.921 ; 1.809 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2135 ; 2.921 ; 1.809 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3114 ; 4.398 ; 2.584 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4899 ; 5.509 ;12.590 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4843 ; 5.506 ;12.461 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5GT9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1300001396. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97911 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51175 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5FYD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM MALONATE PH 7.0, 12% W/V REMARK 280 POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.65500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.36500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.36500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.82750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.36500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.36500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 128.48250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.36500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.36500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 42.82750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.36500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.36500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 128.48250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 85.65500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 263 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 53 OE1 GLU A 59 1.89 REMARK 500 NZ LYS A 61 O HOH A 401 1.98 REMARK 500 O HOH B 401 O HOH B 478 1.99 REMARK 500 O HOH A 509 O HOH A 511 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET A 88 CA MET A 88 C 0.179 REMARK 500 GLU B 109 CD GLU B 109 OE1 -0.081 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 88 CG - SD - CE ANGL. DEV. = -19.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 116 -57.89 -123.93 REMARK 500 SER A 149 162.56 74.30 REMARK 500 ASN A 153 52.33 -158.27 REMARK 500 PRO A 202 23.52 -65.12 REMARK 500 LEU B 3 -33.38 -134.92 REMARK 500 SER B 96 115.38 -161.50 REMARK 500 VAL B 116 -61.88 -122.31 REMARK 500 SER B 149 158.27 77.54 REMARK 500 ASN B 153 30.49 -151.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP B 301 DBREF 5GT9 A 1 263 UNP A4ECA9 A4ECA9_9ACTN 1 263 DBREF 5GT9 B 1 263 UNP A4ECA9 A4ECA9_9ACTN 1 263 SEQRES 1 A 263 MET ASN LEU ARG GLU LYS TYR GLY GLU TRP GLY LEU ILE SEQRES 2 A 263 LEU GLY ALA THR GLU GLY VAL GLY LYS ALA PHE CYS GLU SEQRES 3 A 263 LYS ILE ALA ALA GLY GLY MET ASN VAL VAL MET VAL GLY SEQRES 4 A 263 ARG ARG GLU GLU LYS LEU ASN VAL LEU ALA GLY GLU ILE SEQRES 5 A 263 ARG GLU THR TYR GLY VAL GLU THR LYS VAL VAL ARG ALA SEQRES 6 A 263 ASP PHE SER GLN PRO GLY ALA ALA GLU THR VAL PHE ALA SEQRES 7 A 263 ALA THR GLU GLY LEU ASP MET GLY PHE MET SER TYR VAL SEQRES 8 A 263 ALA CYS LEU HIS SER PHE GLY LYS ILE GLN ASP THR PRO SEQRES 9 A 263 TRP GLU LYS HIS GLU ALA MET ILE ASN VAL ASN VAL VAL SEQRES 10 A 263 THR PHE LEU LYS CYS PHE HIS HIS TYR MET ARG ILE PHE SEQRES 11 A 263 ALA ALA GLN ASP ARG GLY ALA VAL ILE ASN VAL SER SER SEQRES 12 A 263 MET THR GLY ILE SER SER SER PRO TRP ASN GLY GLN TYR SEQRES 13 A 263 GLY ALA GLY LYS ALA PHE ILE LEU LYS MET THR GLU ALA SEQRES 14 A 263 VAL ALA CYS GLU CYS GLU GLY THR GLY VAL ASP VAL GLU SEQRES 15 A 263 VAL ILE THR LEU GLY THR THR LEU THR PRO SER LEU LEU SEQRES 16 A 263 SER ASN LEU PRO GLY GLY PRO GLN GLY GLU ALA VAL MET SEQRES 17 A 263 LYS ILE ALA LEU THR PRO GLU GLU CYS VAL ASP GLU ALA SEQRES 18 A 263 PHE GLU LYS LEU GLY LYS GLU LEU SER VAL ILE ALA GLY SEQRES 19 A 263 GLN ARG ASN LYS ASP SER VAL HIS ASP TRP LYS ALA ASN SEQRES 20 A 263 HIS THR GLU ASP GLU TYR ILE ARG TYR MET GLY SER PHE SEQRES 21 A 263 TYR ARG ASP SEQRES 1 B 263 MET ASN LEU ARG GLU LYS TYR GLY GLU TRP GLY LEU ILE SEQRES 2 B 263 LEU GLY ALA THR GLU GLY VAL GLY LYS ALA PHE CYS GLU SEQRES 3 B 263 LYS ILE ALA ALA GLY GLY MET ASN VAL VAL MET VAL GLY SEQRES 4 B 263 ARG ARG GLU GLU LYS LEU ASN VAL LEU ALA GLY GLU ILE SEQRES 5 B 263 ARG GLU THR TYR GLY VAL GLU THR LYS VAL VAL ARG ALA SEQRES 6 B 263 ASP PHE SER GLN PRO GLY ALA ALA GLU THR VAL PHE ALA SEQRES 7 B 263 ALA THR GLU GLY LEU ASP MET GLY PHE MET SER TYR VAL SEQRES 8 B 263 ALA CYS LEU HIS SER PHE GLY LYS ILE GLN ASP THR PRO SEQRES 9 B 263 TRP GLU LYS HIS GLU ALA MET ILE ASN VAL ASN VAL VAL SEQRES 10 B 263 THR PHE LEU LYS CYS PHE HIS HIS TYR MET ARG ILE PHE SEQRES 11 B 263 ALA ALA GLN ASP ARG GLY ALA VAL ILE ASN VAL SER SER SEQRES 12 B 263 MET THR GLY ILE SER SER SER PRO TRP ASN GLY GLN TYR SEQRES 13 B 263 GLY ALA GLY LYS ALA PHE ILE LEU LYS MET THR GLU ALA SEQRES 14 B 263 VAL ALA CYS GLU CYS GLU GLY THR GLY VAL ASP VAL GLU SEQRES 15 B 263 VAL ILE THR LEU GLY THR THR LEU THR PRO SER LEU LEU SEQRES 16 B 263 SER ASN LEU PRO GLY GLY PRO GLN GLY GLU ALA VAL MET SEQRES 17 B 263 LYS ILE ALA LEU THR PRO GLU GLU CYS VAL ASP GLU ALA SEQRES 18 B 263 PHE GLU LYS LEU GLY LYS GLU LEU SER VAL ILE ALA GLY SEQRES 19 B 263 GLN ARG ASN LYS ASP SER VAL HIS ASP TRP LYS ALA ASN SEQRES 20 B 263 HIS THR GLU ASP GLU TYR ILE ARG TYR MET GLY SER PHE SEQRES 21 B 263 TYR ARG ASP HET NAP A 301 48 HET NAP B 301 48 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 5 HOH *202(H2 O) HELIX 1 AA1 ASN A 2 GLY A 8 1 7 HELIX 2 AA2 GLU A 18 GLY A 31 1 14 HELIX 3 AA3 ARG A 41 GLY A 57 1 17 HELIX 4 AA4 GLY A 71 THR A 80 1 10 HELIX 5 AA5 LYS A 99 THR A 103 5 5 HELIX 6 AA6 PRO A 104 VAL A 116 1 13 HELIX 7 AA7 VAL A 116 ASP A 134 1 19 HELIX 8 AA8 MET A 144 SER A 149 1 6 HELIX 9 AA9 ASN A 153 GLU A 175 1 23 HELIX 10 AB1 THR A 191 SER A 196 1 6 HELIX 11 AB2 PRO A 202 LYS A 209 1 8 HELIX 12 AB3 THR A 213 LEU A 225 1 13 HELIX 13 AB4 GLY A 234 HIS A 248 1 15 HELIX 14 AB5 THR A 249 SER A 259 1 11 HELIX 15 AB6 GLU B 18 GLY B 31 1 14 HELIX 16 AB7 ARG B 41 GLY B 57 1 17 HELIX 17 AB8 GLY B 71 GLU B 81 1 11 HELIX 18 AB9 LYS B 99 THR B 103 5 5 HELIX 19 AC1 PRO B 104 VAL B 116 1 13 HELIX 20 AC2 VAL B 116 ASP B 134 1 19 HELIX 21 AC3 MET B 144 SER B 149 1 6 HELIX 22 AC4 ASN B 153 CYS B 174 1 22 HELIX 23 AC5 THR B 191 SER B 196 1 6 HELIX 24 AC6 GLY B 201 LYS B 209 1 9 HELIX 25 AC7 THR B 213 LEU B 225 1 13 HELIX 26 AC8 GLY B 234 HIS B 248 1 15 HELIX 27 AC9 THR B 249 GLY B 258 1 10 SHEET 1 AA1 7 THR A 60 ARG A 64 0 SHEET 2 AA1 7 ASN A 34 GLY A 39 1 N MET A 37 O LYS A 61 SHEET 3 AA1 7 TRP A 10 LEU A 14 1 N GLY A 11 O VAL A 36 SHEET 4 AA1 7 MET A 85 TYR A 90 1 O GLY A 86 N TRP A 10 SHEET 5 AA1 7 GLY A 136 SER A 143 1 O ALA A 137 N MET A 88 SHEET 6 AA1 7 VAL A 179 LEU A 186 1 O ILE A 184 N SER A 142 SHEET 7 AA1 7 SER A 230 ILE A 232 1 O VAL A 231 N THR A 185 SHEET 1 AA2 7 THR B 60 ARG B 64 0 SHEET 2 AA2 7 ASN B 34 GLY B 39 1 N MET B 37 O LYS B 61 SHEET 3 AA2 7 TRP B 10 LEU B 14 1 N GLY B 11 O VAL B 36 SHEET 4 AA2 7 MET B 85 TYR B 90 1 O GLY B 86 N TRP B 10 SHEET 5 AA2 7 GLY B 136 SER B 143 1 O VAL B 141 N TYR B 90 SHEET 6 AA2 7 VAL B 179 LEU B 186 1 O ILE B 184 N SER B 142 SHEET 7 AA2 7 SER B 230 ILE B 232 1 O VAL B 231 N THR B 185 CISPEP 1 GLY A 201 PRO A 202 0 -5.12 SITE 1 AC1 26 GLY A 15 THR A 17 GLU A 18 GLY A 19 SITE 2 AC1 26 VAL A 20 GLY A 21 GLY A 39 ARG A 40 SITE 3 AC1 26 ARG A 41 ALA A 65 ASP A 66 PHE A 67 SITE 4 AC1 26 VAL A 91 ALA A 92 PRO A 192 HOH A 408 SITE 5 AC1 26 HOH A 431 HOH A 472 HOH A 480 HOH A 484 SITE 6 AC1 26 SER B 240 ASP B 243 TRP B 244 HIS B 248 SITE 7 AC1 26 TYR B 256 HOH B 405 SITE 1 AC2 30 GLY B 15 THR B 17 GLU B 18 GLY B 19 SITE 2 AC2 30 VAL B 20 ARG B 40 ARG B 41 ALA B 65 SITE 3 AC2 30 ASP B 66 PHE B 67 SER B 68 VAL B 91 SITE 4 AC2 30 ALA B 92 CYS B 93 VAL B 141 SER B 143 SITE 5 AC2 30 TYR B 156 LYS B 160 LEU B 186 GLY B 187 SITE 6 AC2 30 THR B 188 THR B 189 THR B 191 SER B 193 SITE 7 AC2 30 HOH B 408 HOH B 414 HOH B 444 HOH B 446 SITE 8 AC2 30 HOH B 450 HOH B 464 CRYST1 72.730 72.730 171.310 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013749 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013749 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005837 0.00000 MASTER 350 0 2 27 14 0 15 6 0 0 0 42 END