HEADER TRANSFERASE 03-MAR-16 5FY1 TITLE CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY IN TITLE 2 COMPLEX WITH N08619B COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE DEMETHYLASE UTY; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: JMJC DOMAIN, RESIDUES 878-1347; COMPND 5 SYNONYM: UBIQUITOUSLY-TRANSCRIBED TPR PROTEIN ON THE Y CHROMOSOME, U COMPND 6 BIQUITOUSLY-TRANSCRIBED Y CHROMOSOME TETRATRICOPEPTIDE REPEAT COMPND 7 PROTEIN; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9 KEYWDS TRANSFERASE, PANDDA, FRAGMENT SOAKING, X-RAY FRAGMENT SCREENING EXPDTA X-RAY DIFFRACTION AUTHOR R.NOWAK,T.KROJER,C.JOHANSSON,C.GILEADI,K.KUPINSKA,N.M.PEARCE,F.VON AUTHOR 2 DELFT,C.H.ARROWSMITH,C.BOUNTRA,A.EDWARDS,U.OPPERMANN REVDAT 2 24-JAN-18 5FY1 1 JRNL REVDAT 1 16-MAR-16 5FY1 0 JRNL AUTH R.NOWAK,T.KROJER,C.JOHANSSON,C.GILEADI,K.KUPINSKA, JRNL AUTH 2 N.M.PEARCE,F.VON DELFT,C.H.ARROWSMITH,C.BOUNTRA,A.EDWARDS, JRNL AUTH 3 U.OPPERMANN JRNL TITL CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE JRNL TITL 2 DEMETHYLASE UTY IN COMPLEX WITH N08619B JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 114784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5722 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 2.00 REMARK 3 SHRINKAGE RADIUS : 2.00 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DISORDERED SIDE CHAINS WERE REMOVED REMARK 4 REMARK 4 5FY1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1290066353. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92819 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 114896 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 47.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.100 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 1.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: DIMPLE REMARK 200 STARTING MODEL: PDB ENTRY 3ZLI REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH 7.2 -- 25% PEG3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 45.85500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.06500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.04000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.06500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 45.85500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.04000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 877 REMARK 465 LEU A 878 REMARK 465 PRO A 879 REMARK 465 LYS A 1000 REMARK 465 ARG A 1001 REMARK 465 THR A 1002 REMARK 465 GLN A 1003 REMARK 465 HIS A 1004 REMARK 465 LYS A 1005 REMARK 465 ASP A 1006 REMARK 465 HIS A 1007 REMARK 465 SER A 1008 REMARK 465 ASP A 1009 REMARK 465 ASN A 1010 REMARK 465 GLU A 1011 REMARK 465 SER A 1012 REMARK 465 THR A 1013 REMARK 465 SER A 1014 REMARK 465 SER A 1015 REMARK 465 GLU A 1016 REMARK 465 ASN A 1017 REMARK 465 SER A 1018 REMARK 465 GLY A 1019 REMARK 465 ARG A 1020 REMARK 465 ARG A 1021 REMARK 465 ARG A 1022 REMARK 465 SER A 1345 REMARK 465 SER A 1346 REMARK 465 SER A 1347 REMARK 465 ALA A 1348 REMARK 465 GLU A 1349 REMARK 465 ASN A 1350 REMARK 465 LEU A 1351 REMARK 465 TYR A 1352 REMARK 465 PHE A 1353 REMARK 465 GLN A 1354 REMARK 465 MET B 877 REMARK 465 LEU B 878 REMARK 465 PRO B 879 REMARK 465 LYS B 880 REMARK 465 LYS B 1000 REMARK 465 ARG B 1001 REMARK 465 THR B 1002 REMARK 465 GLN B 1003 REMARK 465 HIS B 1004 REMARK 465 LYS B 1005 REMARK 465 ASP B 1006 REMARK 465 HIS B 1007 REMARK 465 SER B 1008 REMARK 465 ASP B 1009 REMARK 465 ASN B 1010 REMARK 465 GLU B 1011 REMARK 465 SER B 1012 REMARK 465 THR B 1013 REMARK 465 SER B 1014 REMARK 465 SER B 1015 REMARK 465 GLU B 1016 REMARK 465 ASN B 1017 REMARK 465 SER B 1018 REMARK 465 GLY B 1019 REMARK 465 ARG B 1020 REMARK 465 ARG B 1021 REMARK 465 ARG B 1022 REMARK 465 LYS B 1023 REMARK 465 GLY B 1024 REMARK 465 TYR B 1352 REMARK 465 PHE B 1353 REMARK 465 GLN B 1354 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 880 CG CD CE NZ REMARK 470 ASP A 881 CG OD1 OD2 REMARK 470 LYS A 882 CG CD CE NZ REMARK 470 LYS A 911 CE NZ REMARK 470 LYS A 934 CD CE NZ REMARK 470 GLU A 938 CG CD OE1 OE2 REMARK 470 LYS A 965 CE NZ REMARK 470 GLU A 971 CG CD OE1 OE2 REMARK 470 GLU A 996 CG CD OE1 OE2 REMARK 470 LYS A1041 CD CE NZ REMARK 470 LYS A1130 CG CD CE NZ REMARK 470 LYS A1234 CG CD CE NZ REMARK 470 LYS A1248 CE NZ REMARK 470 ASP A1272 CG OD1 OD2 REMARK 470 LYS A1299 CE NZ REMARK 470 LYS A1314 CG CD CE NZ REMARK 470 ASP A1329 CG OD1 OD2 REMARK 470 LYS B 882 CD CE NZ REMARK 470 GLU B 893 CG CD OE1 OE2 REMARK 470 ARG B 896 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 900 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 905 CG CD OE1 NE2 REMARK 470 LYS B 925 CE NZ REMARK 470 LYS B 934 CE NZ REMARK 470 GLU B 938 CD OE1 OE2 REMARK 470 LYS B 965 CE NZ REMARK 470 GLU B 971 CG CD OE1 OE2 REMARK 470 ARG B 974 CD NE CZ NH1 NH2 REMARK 470 LYS B 981 CE NZ REMARK 470 GLU B 992 CG CD OE1 OE2 REMARK 470 LYS B1044 CE NZ REMARK 470 LYS B1234 CG CD CE NZ REMARK 470 GLU B1237 CG CD OE1 OE2 REMARK 470 GLN B1251 CG CD OE1 NE2 REMARK 470 GLU B1263 CG CD OE1 OE2 REMARK 470 ASN B1271 CG OD1 ND2 REMARK 470 ASP B1272 CG OD1 OD2 REMARK 470 GLU B1328 CG CD OE1 OE2 REMARK 470 GLN B1332 CG CD OE1 NE2 REMARK 470 LEU B1351 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2156 O HOH A 2159 1.91 REMARK 500 O HOH B 2142 O HOH B 2148 1.95 REMARK 500 O TYR B 1325 O HOH B 2228 2.01 REMARK 500 OH TYR B 1250 O HOH B 2228 2.01 REMARK 500 O HOH B 2121 O HOH B 2122 2.07 REMARK 500 O HOH A 2118 O HOH A 2124 2.08 REMARK 500 O HOH A 2054 O HOH A 2227 2.08 REMARK 500 NE2 HIS A 1071 O HOH A 2133 2.08 REMARK 500 O HOH A 2295 O HOH A 2296 2.09 REMARK 500 O HOH B 2143 O HOH B 2145 2.10 REMARK 500 O HOH B 2238 O HOH B 2239 2.11 REMARK 500 O HOH A 2180 O HOH A 2271 2.12 REMARK 500 O HOH A 2130 O HOH A 2267 2.13 REMARK 500 OE1 GLU B 1145 O HOH B 2174 2.13 REMARK 500 O HOH A 2096 O HOH A 2222 2.14 REMARK 500 O HOH A 2011 O HOH A 2202 2.14 REMARK 500 O HOH A 2162 O HOH A 2164 2.14 REMARK 500 OE2 GLU A 946 NH1 ARG A 948 2.16 REMARK 500 O HOH A 2133 O HOH A 2210 2.17 REMARK 500 O HOH B 2101 O HOH B 2236 2.17 REMARK 500 O HOH B 2168 O HOH B 2257 2.17 REMARK 500 O HOH A 2008 O HOH A 2009 2.18 REMARK 500 O HOH A 2128 O HOH A 2291 2.18 REMARK 500 O HOH B 2245 O HOH B 2246 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN A 1249 O HOH B 2219 4555 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 940 78.33 -152.79 REMARK 500 ALA A 955 -121.38 42.64 REMARK 500 SER A 972 74.61 -152.59 REMARK 500 ASN A1287 -65.90 70.16 REMARK 500 TYR A1301 55.78 21.53 REMARK 500 ASN B 940 73.10 -151.39 REMARK 500 ALA B 955 -119.97 52.11 REMARK 500 MET B1076 -61.35 -105.01 REMARK 500 ASN B1271 94.67 -68.33 REMARK 500 PRO B1274 -175.20 -66.44 REMARK 500 ILE B1280 -60.73 -97.15 REMARK 500 ASN B1287 -73.44 71.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A2345 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1281 SG REMARK 620 2 CYS A1278 SG 104.6 REMARK 620 3 CYS A1308 SG 113.0 105.1 REMARK 620 4 CYS A1305 SG 114.9 112.8 106.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A2346 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A1095 OE2 REMARK 620 2 HOH A2156 O 97.5 REMARK 620 3 HIS A1173 NE2 92.6 104.0 REMARK 620 4 HOH A2148 O 80.2 87.3 167.4 REMARK 620 5 HIS A1093 NE2 91.5 165.8 86.5 83.4 REMARK 620 6 HOH A2149 O 163.4 71.1 101.7 87.1 97.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B2352 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1281 SG REMARK 620 2 CYS B1305 SG 115.3 REMARK 620 3 CYS B1308 SG 105.5 107.4 REMARK 620 4 CYS B1278 SG 109.1 112.8 106.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B2353 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2133 O REMARK 620 2 GLU B1095 OE2 79.0 REMARK 620 3 HIS B1093 NE2 82.6 89.9 REMARK 620 4 HOH B2185 O 96.0 160.9 107.8 REMARK 620 5 HOH B2142 O 98.6 93.2 176.8 69.2 REMARK 620 6 HIS B1173 NE2 162.2 91.1 82.7 98.0 96.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 2345 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 2352 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 2353 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 2346 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0R0 A 2347 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0R0 A 2348 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 2354 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 2349 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 2350 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2355 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2351 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2352 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2353 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2354 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2355 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2356 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2357 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2358 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2356 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2359 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2360 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2361 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2362 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2357 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2358 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2363 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2359 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2360 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2364 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2365 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2366 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2367 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2368 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2361 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2362 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2369 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2370 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2363 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2371 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2364 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FXV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH N05859B REMARK 900 RELATED ID: 5FXW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH FUMARATE REMARK 900 RELATED ID: 5FXX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH OXALOACETATE REMARK 900 RELATED ID: 5FXZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH CITRATE REMARK 900 RELATED ID: 5FY0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH L-MALATE REMARK 900 RELATED ID: 5FY4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN JARID1B IN REMARK 900 COMPLEX WITH SUCCINATE REMARK 900 RELATED ID: 5FY5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN JARID1B IN REMARK 900 COMPLEX WITH FUMARATE REMARK 900 RELATED ID: 5FY7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH SUCCINATE REMARK 900 RELATED ID: 5FY8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN JMJD2A IN COMPLEX WITH D- THREO- REMARK 900 ISOCITRATE REMARK 900 RELATED ID: 5FY9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN JARID1B IN REMARK 900 COMPLEX WITH PYRUVATE REMARK 900 RELATED ID: 5FYB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN JARID1B IN REMARK 900 COMPLEX WITH MC1648 REMARK 900 RELATED ID: 5FYC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN JMJD2A IN COMPLEX WITH SUCCINATE REMARK 900 RELATED ID: 5FYH RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN JMJD2A IN COMPLEX WITH FUMARATE REMARK 900 RELATED ID: 5FYI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN JMJD2A IN COMPLEX WITH PYRUVATE REMARK 900 RELATED ID: 5FYM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH D-2-HYDROXYGLUTARATE DBREF 5FY1 A 878 1347 UNP O14607 UTY_HUMAN 878 1347 DBREF 5FY1 B 878 1347 UNP O14607 UTY_HUMAN 878 1347 SEQADV 5FY1 MET A 877 UNP O14607 EXPRESSION TAG SEQADV 5FY1 ALA A 1348 UNP O14607 EXPRESSION TAG SEQADV 5FY1 GLU A 1349 UNP O14607 EXPRESSION TAG SEQADV 5FY1 ASN A 1350 UNP O14607 EXPRESSION TAG SEQADV 5FY1 LEU A 1351 UNP O14607 EXPRESSION TAG SEQADV 5FY1 TYR A 1352 UNP O14607 EXPRESSION TAG SEQADV 5FY1 PHE A 1353 UNP O14607 EXPRESSION TAG SEQADV 5FY1 GLN A 1354 UNP O14607 EXPRESSION TAG SEQADV 5FY1 MET B 877 UNP O14607 EXPRESSION TAG SEQADV 5FY1 ALA B 1348 UNP O14607 EXPRESSION TAG SEQADV 5FY1 GLU B 1349 UNP O14607 EXPRESSION TAG SEQADV 5FY1 ASN B 1350 UNP O14607 EXPRESSION TAG SEQADV 5FY1 LEU B 1351 UNP O14607 EXPRESSION TAG SEQADV 5FY1 TYR B 1352 UNP O14607 EXPRESSION TAG SEQADV 5FY1 PHE B 1353 UNP O14607 EXPRESSION TAG SEQADV 5FY1 GLN B 1354 UNP O14607 EXPRESSION TAG SEQRES 1 A 478 MET LEU PRO LYS ASP LYS LEU ASN PRO PRO THR PRO SER SEQRES 2 A 478 ILE TYR LEU GLU ASN LYS ARG ASP ALA PHE PHE PRO PRO SEQRES 3 A 478 LEU HIS GLN PHE CYS THR ASN PRO LYS ASN PRO VAL THR SEQRES 4 A 478 VAL ILE ARG GLY LEU ALA GLY ALA LEU LYS LEU ASP LEU SEQRES 5 A 478 GLY LEU PHE SER THR LYS THR LEU VAL GLU ALA ASN ASN SEQRES 6 A 478 GLU HIS MET VAL GLU VAL ARG THR GLN LEU LEU GLN PRO SEQRES 7 A 478 ALA ASP GLU ASN TRP ASP PRO THR GLY THR LYS LYS ILE SEQRES 8 A 478 TRP ARG CYS GLU SER ASN ARG SER HIS THR THR ILE ALA SEQRES 9 A 478 LYS TYR ALA GLN TYR GLN ALA SER SER PHE GLN GLU SER SEQRES 10 A 478 LEU ARG GLU GLU ASN GLU LYS ARG THR GLN HIS LYS ASP SEQRES 11 A 478 HIS SER ASP ASN GLU SER THR SER SER GLU ASN SER GLY SEQRES 12 A 478 ARG ARG ARG LYS GLY PRO PHE LYS THR ILE LYS PHE GLY SEQRES 13 A 478 THR ASN ILE ASP LEU SER ASP ASN LYS LYS TRP LYS LEU SEQRES 14 A 478 GLN LEU HIS GLU LEU THR LYS LEU PRO ALA PHE ALA ARG SEQRES 15 A 478 VAL VAL SER ALA GLY ASN LEU LEU THR HIS VAL GLY HIS SEQRES 16 A 478 THR ILE LEU GLY MET ASN THR VAL GLN LEU TYR MET LYS SEQRES 17 A 478 VAL PRO GLY SER ARG THR PRO GLY HIS GLN GLU ASN ASN SEQRES 18 A 478 ASN PHE CYS SER VAL ASN ILE ASN ILE GLY PRO GLY ASP SEQRES 19 A 478 CYS GLU TRP PHE VAL VAL PRO GLU ASP TYR TRP GLY VAL SEQRES 20 A 478 LEU ASN ASP PHE CYS GLU LYS ASN ASN LEU ASN PHE LEU SEQRES 21 A 478 MET SER SER TRP TRP PRO ASN LEU GLU ASP LEU TYR GLU SEQRES 22 A 478 ALA ASN VAL PRO VAL TYR ARG PHE ILE GLN ARG PRO GLY SEQRES 23 A 478 ASP LEU VAL TRP ILE ASN ALA GLY THR VAL HIS TRP VAL SEQRES 24 A 478 GLN ALA VAL GLY TRP CYS ASN ASN ILE ALA TRP ASN VAL SEQRES 25 A 478 GLY PRO LEU THR ALA CYS GLN TYR LYS LEU ALA VAL GLU SEQRES 26 A 478 ARG TYR GLU TRP ASN LYS LEU LYS SER VAL LYS SER PRO SEQRES 27 A 478 VAL PRO MET VAL HIS LEU SER TRP ASN MET ALA ARG ASN SEQRES 28 A 478 ILE LYS VAL SER ASP PRO LYS LEU PHE GLU MET ILE LYS SEQRES 29 A 478 TYR CYS LEU LEU LYS ILE LEU LYS GLN TYR GLN THR LEU SEQRES 30 A 478 ARG GLU ALA LEU VAL ALA ALA GLY LYS GLU VAL ILE TRP SEQRES 31 A 478 HIS GLY ARG THR ASN ASP GLU PRO ALA HIS TYR CYS SER SEQRES 32 A 478 ILE CYS GLU VAL GLU VAL PHE ASN LEU LEU PHE VAL THR SEQRES 33 A 478 ASN GLU SER ASN THR GLN LYS THR TYR ILE VAL HIS CYS SEQRES 34 A 478 HIS ASP CYS ALA ARG LYS THR SER LYS SER LEU GLU ASN SEQRES 35 A 478 PHE VAL VAL LEU GLU GLN TYR LYS MET GLU ASP LEU ILE SEQRES 36 A 478 GLN VAL TYR ASP GLN PHE THR LEU ALA LEU SER LEU SER SEQRES 37 A 478 SER SER SER ALA GLU ASN LEU TYR PHE GLN SEQRES 1 B 478 MET LEU PRO LYS ASP LYS LEU ASN PRO PRO THR PRO SER SEQRES 2 B 478 ILE TYR LEU GLU ASN LYS ARG ASP ALA PHE PHE PRO PRO SEQRES 3 B 478 LEU HIS GLN PHE CYS THR ASN PRO LYS ASN PRO VAL THR SEQRES 4 B 478 VAL ILE ARG GLY LEU ALA GLY ALA LEU LYS LEU ASP LEU SEQRES 5 B 478 GLY LEU PHE SER THR LYS THR LEU VAL GLU ALA ASN ASN SEQRES 6 B 478 GLU HIS MET VAL GLU VAL ARG THR GLN LEU LEU GLN PRO SEQRES 7 B 478 ALA ASP GLU ASN TRP ASP PRO THR GLY THR LYS LYS ILE SEQRES 8 B 478 TRP ARG CYS GLU SER ASN ARG SER HIS THR THR ILE ALA SEQRES 9 B 478 LYS TYR ALA GLN TYR GLN ALA SER SER PHE GLN GLU SER SEQRES 10 B 478 LEU ARG GLU GLU ASN GLU LYS ARG THR GLN HIS LYS ASP SEQRES 11 B 478 HIS SER ASP ASN GLU SER THR SER SER GLU ASN SER GLY SEQRES 12 B 478 ARG ARG ARG LYS GLY PRO PHE LYS THR ILE LYS PHE GLY SEQRES 13 B 478 THR ASN ILE ASP LEU SER ASP ASN LYS LYS TRP LYS LEU SEQRES 14 B 478 GLN LEU HIS GLU LEU THR LYS LEU PRO ALA PHE ALA ARG SEQRES 15 B 478 VAL VAL SER ALA GLY ASN LEU LEU THR HIS VAL GLY HIS SEQRES 16 B 478 THR ILE LEU GLY MET ASN THR VAL GLN LEU TYR MET LYS SEQRES 17 B 478 VAL PRO GLY SER ARG THR PRO GLY HIS GLN GLU ASN ASN SEQRES 18 B 478 ASN PHE CYS SER VAL ASN ILE ASN ILE GLY PRO GLY ASP SEQRES 19 B 478 CYS GLU TRP PHE VAL VAL PRO GLU ASP TYR TRP GLY VAL SEQRES 20 B 478 LEU ASN ASP PHE CYS GLU LYS ASN ASN LEU ASN PHE LEU SEQRES 21 B 478 MET SER SER TRP TRP PRO ASN LEU GLU ASP LEU TYR GLU SEQRES 22 B 478 ALA ASN VAL PRO VAL TYR ARG PHE ILE GLN ARG PRO GLY SEQRES 23 B 478 ASP LEU VAL TRP ILE ASN ALA GLY THR VAL HIS TRP VAL SEQRES 24 B 478 GLN ALA VAL GLY TRP CYS ASN ASN ILE ALA TRP ASN VAL SEQRES 25 B 478 GLY PRO LEU THR ALA CYS GLN TYR LYS LEU ALA VAL GLU SEQRES 26 B 478 ARG TYR GLU TRP ASN LYS LEU LYS SER VAL LYS SER PRO SEQRES 27 B 478 VAL PRO MET VAL HIS LEU SER TRP ASN MET ALA ARG ASN SEQRES 28 B 478 ILE LYS VAL SER ASP PRO LYS LEU PHE GLU MET ILE LYS SEQRES 29 B 478 TYR CYS LEU LEU LYS ILE LEU LYS GLN TYR GLN THR LEU SEQRES 30 B 478 ARG GLU ALA LEU VAL ALA ALA GLY LYS GLU VAL ILE TRP SEQRES 31 B 478 HIS GLY ARG THR ASN ASP GLU PRO ALA HIS TYR CYS SER SEQRES 32 B 478 ILE CYS GLU VAL GLU VAL PHE ASN LEU LEU PHE VAL THR SEQRES 33 B 478 ASN GLU SER ASN THR GLN LYS THR TYR ILE VAL HIS CYS SEQRES 34 B 478 HIS ASP CYS ALA ARG LYS THR SER LYS SER LEU GLU ASN SEQRES 35 B 478 PHE VAL VAL LEU GLU GLN TYR LYS MET GLU ASP LEU ILE SEQRES 36 B 478 GLN VAL TYR ASP GLN PHE THR LEU ALA LEU SER LEU SER SEQRES 37 B 478 SER SER SER ALA GLU ASN LEU TYR PHE GLN HET ZN A2345 1 HET MN A2346 1 HET 0R0 A2347 9 HET 0R0 A2348 9 HET DMS A2349 4 HET DMS A2350 4 HET EDO A2351 4 HET EDO A2352 4 HET EDO A2353 4 HET EDO A2354 4 HET EDO A2355 4 HET EDO A2356 4 HET EDO A2357 4 HET EDO A2358 4 HET EDO A2359 4 HET EDO A2360 4 HET EDO A2361 4 HET EDO A2362 4 HET EDO A2363 4 HET EDO A2364 4 HET ZN B2352 1 HET MN B2353 1 HET DMS B2354 4 HET EDO B2355 4 HET EDO B2356 4 HET EDO B2357 4 HET EDO B2358 4 HET EDO B2359 4 HET EDO B2360 4 HET EDO B2361 4 HET EDO B2362 4 HET EDO B2363 4 HET EDO B2364 4 HET EDO B2365 4 HET EDO B2366 4 HET EDO B2367 4 HET EDO B2368 4 HET EDO B2369 4 HET EDO B2370 4 HET EDO B2371 4 HETNAM ZN ZINC ION HETNAM MN MANGANESE (II) ION HETNAM 0R0 2-HYDROXYBENZONITRILE HETNAM DMS DIMETHYL SULFOXIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN 0R0 2-CYANOPHENOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 MN 2(MN 2+) FORMUL 5 0R0 2(C7 H5 N O) FORMUL 7 DMS 3(C2 H6 O S) FORMUL 9 EDO 31(C2 H6 O2) FORMUL 43 HOH *592(H2 O) HELIX 1 1 LYS A 880 ASN A 884 5 5 HELIX 2 2 ASN A 894 PHE A 900 1 7 HELIX 3 3 PHE A 900 ASN A 909 1 10 HELIX 4 4 GLY A 919 LYS A 925 1 7 HELIX 5 5 ASP A 927 PHE A 931 5 5 HELIX 6 6 SER A 932 ASN A 940 1 9 HELIX 7 7 ILE A 979 GLU A 999 1 21 HELIX 8 8 TRP A 1043 LEU A 1050 1 8 HELIX 9 9 THR A 1051 LEU A 1053 5 3 HELIX 10 10 PRO A 1054 ARG A 1058 5 5 HELIX 11 11 ASN A 1064 HIS A 1068 5 5 HELIX 12 12 GLU A 1095 PHE A 1099 5 5 HELIX 13 13 PRO A 1117 ASP A 1119 5 3 HELIX 14 14 TYR A 1120 ASN A 1131 1 12 HELIX 15 15 ASN A 1143 ALA A 1150 1 8 HELIX 16 16 THR A 1192 LYS A 1209 1 18 HELIX 17 17 PRO A 1216 ILE A 1228 1 13 HELIX 18 18 ASP A 1232 ALA A 1260 1 29 HELIX 19 19 ASN A 1293 GLN A 1298 1 6 HELIX 20 20 CYS A 1305 SER A 1313 1 9 HELIX 21 21 LYS A 1326 PHE A 1337 1 12 HELIX 22 22 ASN B 894 PHE B 899 1 6 HELIX 23 23 PRO B 901 ASN B 909 1 9 HELIX 24 24 GLY B 919 LYS B 925 1 7 HELIX 25 25 ASP B 927 PHE B 931 5 5 HELIX 26 26 SER B 932 ASN B 941 1 10 HELIX 27 27 ILE B 979 GLU B 999 1 21 HELIX 28 28 TRP B 1043 LEU B 1050 1 8 HELIX 29 29 THR B 1051 LEU B 1053 5 3 HELIX 30 30 PRO B 1054 ARG B 1058 5 5 HELIX 31 31 ASN B 1064 HIS B 1068 5 5 HELIX 32 32 GLU B 1095 PHE B 1099 5 5 HELIX 33 33 PRO B 1117 ASP B 1119 5 3 HELIX 34 34 TYR B 1120 ASN B 1131 1 12 HELIX 35 35 ASN B 1143 ALA B 1150 1 8 HELIX 36 36 THR B 1192 LYS B 1209 1 18 HELIX 37 37 PRO B 1216 ASN B 1227 1 12 HELIX 38 38 ASP B 1232 GLY B 1261 1 30 HELIX 39 39 ASN B 1293 GLN B 1298 1 6 HELIX 40 40 CYS B 1305 SER B 1313 1 9 HELIX 41 41 LYS B 1326 GLN B 1336 1 11 SHEET 1 AA 9 SER A 889 TYR A 891 0 SHEET 2 AA 9 VAL A 914 ARG A 918 1 O VAL A 916 N ILE A 890 SHEET 3 AA 9 LEU A1164 ILE A1167 -1 O LEU A1164 N ILE A 917 SHEET 4 AA 9 CYS A1100 PRO A1108 -1 O SER A1101 N ILE A1167 SHEET 5 AA 9 CYS A1181 VAL A1188 -1 O ASN A1182 N ILE A1106 SHEET 6 AA 9 GLN A1080 LYS A1084 -1 O GLN A1080 N ALA A1185 SHEET 7 AA 9 THR A1028 ASP A1036 -1 O GLY A1032 N MET A1083 SHEET 8 AA 9 MET A 944 LEU A 951 -1 O GLU A 946 N THR A1033 SHEET 9 AA 9 SER A 972 THR A 978 -1 O ASN A 973 N THR A 949 SHEET 1 AB 4 ARG A1089 HIS A1093 0 SHEET 2 AB 4 VAL A1172 ALA A1177 -1 O HIS A1173 N HIS A1093 SHEET 3 AB 4 CYS A1111 VAL A1116 -1 O GLU A1112 N GLN A1176 SHEET 4 AB 4 TYR A1155 GLN A1159 -1 O TYR A1155 N VAL A1115 SHEET 1 AC 3 VAL A1264 TRP A1266 0 SHEET 2 AC 3 PHE A1319 GLU A1323 1 O VAL A1321 N ILE A1265 SHEET 3 AC 3 LEU A1288 THR A1292 -1 O LEU A1289 N LEU A1322 SHEET 1 AD 2 HIS A1276 TYR A1277 0 SHEET 2 AD 2 GLU A1284 VAL A1285 -1 O VAL A1285 N HIS A1276 SHEET 1 BA 9 SER B 889 TYR B 891 0 SHEET 2 BA 9 VAL B 914 ARG B 918 1 O VAL B 916 N ILE B 890 SHEET 3 BA 9 LEU B1164 ILE B1167 -1 O LEU B1164 N ILE B 917 SHEET 4 BA 9 CYS B1100 PRO B1108 -1 O SER B1101 N ILE B1167 SHEET 5 BA 9 CYS B1181 VAL B1188 -1 O ASN B1182 N ILE B1106 SHEET 6 BA 9 GLN B1080 LYS B1084 -1 O GLN B1080 N ALA B1185 SHEET 7 BA 9 THR B1028 ASP B1036 -1 O GLY B1032 N MET B1083 SHEET 8 BA 9 MET B 944 LEU B 951 -1 O GLU B 946 N THR B1033 SHEET 9 BA 9 ASN B 973 THR B 978 -1 O ASN B 973 N THR B 949 SHEET 1 BB 4 ARG B1089 HIS B1093 0 SHEET 2 BB 4 VAL B1172 ALA B1177 -1 O HIS B1173 N HIS B1093 SHEET 3 BB 4 CYS B1111 VAL B1116 -1 O GLU B1112 N GLN B1176 SHEET 4 BB 4 TYR B1155 GLN B1159 -1 O TYR B1155 N VAL B1115 SHEET 1 BC 2 ILE B1228 VAL B1230 0 SHEET 2 BC 2 ALA B1348 ASN B1350 -1 O GLU B1349 N LYS B1229 SHEET 1 BD 3 VAL B1264 TRP B1266 0 SHEET 2 BD 3 PHE B1319 GLU B1323 1 O VAL B1321 N ILE B1265 SHEET 3 BD 3 LEU B1289 THR B1292 -1 O LEU B1289 N LEU B1322 SHEET 1 BE 2 HIS B1276 TYR B1277 0 SHEET 2 BE 2 GLU B1284 VAL B1285 -1 O VAL B1285 N HIS B1276 LINK ZN ZN A2345 SG CYS A1281 1555 1555 2.41 LINK ZN ZN A2345 SG CYS A1278 1555 1555 2.08 LINK ZN ZN A2345 SG CYS A1308 1555 1555 2.42 LINK ZN ZN A2345 SG CYS A1305 1555 1555 2.35 LINK MN MN A2346 OE2 GLU A1095 1555 1555 2.04 LINK MN MN A2346 O HOH A2156 1555 1555 2.36 LINK MN MN A2346 NE2 HIS A1173 1555 1555 2.27 LINK MN MN A2346 O HOH A2148 1555 1555 1.84 LINK MN MN A2346 NE2 HIS A1093 1555 1555 2.35 LINK MN MN A2346 O HOH A2149 1555 1555 2.28 LINK ZN ZN B2352 SG CYS B1281 1555 1555 2.43 LINK ZN ZN B2352 SG CYS B1305 1555 1555 2.36 LINK ZN ZN B2352 SG CYS B1308 1555 1555 2.42 LINK ZN ZN B2352 SG CYS B1278 1555 1555 2.34 LINK MN MN B2353 O HOH B2133 1555 1555 1.91 LINK MN MN B2353 OE2 GLU B1095 1555 1555 2.17 LINK MN MN B2353 NE2 HIS B1093 1555 1555 2.39 LINK MN MN B2353 O HOH B2185 1555 1555 2.22 LINK MN MN B2353 O HOH B2142 1555 1555 2.23 LINK MN MN B2353 NE2 HIS B1173 1555 1555 2.39 CISPEP 1 GLY A 1024 PRO A 1025 0 -5.71 CISPEP 2 GLY A 1107 PRO A 1108 0 3.15 CISPEP 3 GLY B 1107 PRO B 1108 0 0.99 SITE 1 AC1 4 CYS A1278 CYS A1281 CYS A1305 CYS A1308 SITE 1 AC2 4 CYS B1278 CYS B1281 CYS B1305 CYS B1308 SITE 1 AC3 6 HIS B1093 GLU B1095 HIS B1173 HOH B2133 SITE 2 AC3 6 HOH B2142 HOH B2185 SITE 1 AC4 6 HIS A1093 GLU A1095 HIS A1173 HOH A2148 SITE 2 AC4 6 HOH A2149 HOH A2156 SITE 1 AC5 6 MET A 944 HIS A 976 GLU B1294 THR B1312 SITE 2 AC5 6 ASN B1318 PHE B1319 SITE 1 AC6 6 THR A1292 GLU A1294 THR A1312 ASN A1318 SITE 2 AC6 6 MET B 944 HIS B 976 SITE 1 AC7 7 LYS B1084 THR B1090 ASN B1103 VAL B1175 SITE 2 AC7 7 ASN B1183 HOH B2129 HOH B2185 SITE 1 AC8 8 LYS A1084 THR A1090 ASN A1103 VAL A1175 SITE 2 AC8 8 ASN A1183 HOH A2143 HOH A2149 HOH A2159 SITE 1 AC9 7 ASN A1096 ASN A1097 ARG A1202 ASN A1206 SITE 2 AC9 7 LYS A1212 PRO A1214 HOH A2153 SITE 1 BC1 4 ILE B 967 TRP B 968 ARG B 969 LEU B1133 SITE 1 BC2 6 SER A 932 THR A 933 PRO A1108 HOH A2039 SITE 2 BC2 6 EDO A2352 EDO A2356 SITE 1 BC3 3 PHE A 990 HOH A2081 EDO A2351 SITE 1 BC4 5 ASN A 884 HOH A2004 GLU B 997 ASN B 998 SITE 2 BC4 5 GLU B 999 SITE 1 BC5 4 HIS A1267 GLU A1273 HIS A1276 TYR A1301 SITE 1 BC6 6 GLY A 919 ALA A 921 GLY A 922 PRO A1161 SITE 2 BC6 6 GLY A1162 ASP A1163 SITE 1 BC7 6 LYS A 895 VAL B1123 ASP B1126 PHE B1127 SITE 2 BC7 6 HOH B2176 HOH B2282 SITE 1 BC8 4 PRO B1108 TRP B1180 HOH B2080 EDO B2358 SITE 1 BC9 6 SER B 932 THR B 933 GLY B1107 ASN B1182 SITE 2 BC9 6 EDO B2357 EDO B2364 SITE 1 CC1 5 LEU A 928 GLY A 929 ILE A1106 GLY A1107 SITE 2 CC1 5 EDO A2351 SITE 1 CC2 5 LEU B1050 ARG B1058 VAL B1059 VAL B1060 SITE 2 CC2 5 HOH B2113 SITE 1 CC3 5 HIS B 943 ASP B1036 ASP B1039 LYS B1042 SITE 2 CC3 5 HOH B2097 SITE 1 CC4 7 LYS B1207 SER B1210 VAL B1211 CYS B1281 SITE 2 CC4 7 VAL B1283 HOH B2197 HOH B2286 SITE 1 CC5 7 GLY B1075 GLN B1080 TYR B1082 GLU B1095 SITE 2 CC5 7 SER B1101 HOH B2126 HOH B2133 SITE 1 CC6 5 THR A 908 ASN A1168 PRO A1190 THR A1192 SITE 2 CC6 5 CYS A1194 SITE 1 CC7 4 GLY A1109 GLY A1179 TRP A1180 HOH B2153 SITE 1 CC8 3 ARG A1160 PHE B 990 SER B 993 SITE 1 CC9 5 PRO A 910 ASN A1168 ALA A1169 THR A1171 SITE 2 CC9 5 HOH A2169 SITE 1 DC1 7 GLY A1075 GLN A1080 TYR A1082 GLU A1095 SITE 2 DC1 7 ALA A1185 TRP A1186 HOH A2148 SITE 1 DC2 7 LEU B 928 GLY B 929 SER B 932 ILE B1106 SITE 2 DC2 7 GLY B1107 PRO B1108 EDO B2358 SITE 1 DC3 2 THR B 977 LYS B1030 SITE 1 DC4 6 GLN B1249 HIS B1306 ASP B1307 HOH B2262 SITE 2 DC4 6 HOH B2263 EDO B2368 SITE 1 DC5 6 THR B 908 CYS B1100 ASN B1168 PRO B1190 SITE 2 DC5 6 THR B1192 CYS B1194 SITE 1 DC6 8 LEU A1341 HOH A2301 VAL B1285 PHE B1286 SITE 2 DC6 8 HOH B2248 HOH B2249 HOH B2250 EDO B2366 SITE 1 DC7 4 LYS A1229 VAL A1230 SER A1231 ASP A1232 SITE 1 DC8 3 LEU A1047 HOH A2113 HOH A2123 SITE 1 DC9 2 LYS A1229 LYS B1311 SITE 1 EC1 6 PRO B 910 PRO B 913 ASN B1168 ALA B1169 SITE 2 EC1 6 HOH B2156 HOH B2157 SITE 1 EC2 5 CYS A 970 GLU A 971 SER A1138 SER A1139 SITE 2 EC2 5 HOH A2073 SITE 1 EC3 2 HIS B1304 HOH B2254 SITE 1 EC4 2 TYR A1334 ASP A1335 CRYST1 91.710 110.080 118.130 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010904 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009084 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008465 0.00000 MASTER 647 0 40 41 38 0 66 6 0 0 0 74 END