HEADER HYDROLASE 01-OCT-15 5E2E TITLE CRYSTAL STRUCTURE OF BETA-LACTAMASE PRECURSOR BLAA FROM YERSINIA TITLE 2 ENTEROCOLITICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 28-294; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA ENTEROCOLITICA SEROTYPE O:8 / BIOTYPE SOURCE 3 1B (STRAIN NCTC 13174 / 8081); SOURCE 4 ORGANISM_TAXID: 393305; SOURCE 5 STRAIN: NCTC 13174 / 8081; SOURCE 6 GENE: BLAA, YE2019; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS BETA-LACTAMASE, STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, MCSG, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,G.JOACHIMIAK,M.ENDRES,G.BABNIGG,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 1 28-OCT-15 5E2E 0 JRNL AUTH Y.KIM,G.JOACHIMIAK,M.ENDRES,G.BABNIGG,A.JOACHIMIAK, JRNL AUTH 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) JRNL TITL CRYSTAL STRUCTURE OF BETA-LACTAMASE PRECURSOR BLAA FROM JRNL TITL 2 YERSINIA ENTEROCOLITICA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10PRE-2104 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 37357 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 1799 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.7197 - 4.4645 0.98 3020 134 0.1738 0.1952 REMARK 3 2 4.4645 - 3.5453 1.00 2906 139 0.1644 0.1996 REMARK 3 3 3.5453 - 3.0977 1.00 2899 131 0.1932 0.2446 REMARK 3 4 3.0977 - 2.8147 1.00 2839 143 0.2043 0.2664 REMARK 3 5 2.8147 - 2.6130 1.00 2849 140 0.2051 0.2508 REMARK 3 6 2.6130 - 2.4590 1.00 2804 153 0.1962 0.2562 REMARK 3 7 2.4590 - 2.3359 1.00 2805 154 0.2071 0.2339 REMARK 3 8 2.3359 - 2.2343 1.00 2806 152 0.2069 0.2625 REMARK 3 9 2.2343 - 2.1483 1.00 2827 157 0.2209 0.2769 REMARK 3 10 2.1483 - 2.0742 0.99 2776 144 0.2225 0.2804 REMARK 3 11 2.0742 - 2.0093 0.97 2691 143 0.2354 0.2937 REMARK 3 12 2.0093 - 1.9519 0.86 2418 112 0.2423 0.3120 REMARK 3 13 1.9519 - 1.9005 0.69 1918 97 0.2690 0.3159 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4013 REMARK 3 ANGLE : 0.906 5454 REMARK 3 CHIRALITY : 0.050 632 REMARK 3 PLANARITY : 0.005 710 REMARK 3 DIHEDRAL : 13.538 2437 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7165 -27.4025 50.7414 REMARK 3 T TENSOR REMARK 3 T11: 0.3312 T22: 0.3414 REMARK 3 T33: 0.0913 T12: -0.0551 REMARK 3 T13: 0.0186 T23: -0.0385 REMARK 3 L TENSOR REMARK 3 L11: 1.4800 L22: 1.5956 REMARK 3 L33: 1.6973 L12: -0.1996 REMARK 3 L13: -0.1641 L23: 0.4979 REMARK 3 S TENSOR REMARK 3 S11: 0.0223 S12: -0.5993 S13: 0.1279 REMARK 3 S21: 0.5521 S22: 0.0607 S23: -0.0984 REMARK 3 S31: -0.0120 S32: 0.5297 S33: -0.0046 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 64 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3081 -43.8352 30.3401 REMARK 3 T TENSOR REMARK 3 T11: 0.1993 T22: 0.1689 REMARK 3 T33: 0.1748 T12: 0.0854 REMARK 3 T13: 0.0217 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 1.9843 L22: 1.7243 REMARK 3 L33: 2.1774 L12: -1.0430 REMARK 3 L13: 0.1407 L23: 0.4106 REMARK 3 S TENSOR REMARK 3 S11: -0.1492 S12: 0.0679 S13: -0.0941 REMARK 3 S21: 0.0499 S22: -0.0364 S23: 0.1730 REMARK 3 S31: 0.6074 S32: 0.4027 S33: 0.1636 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2126 -33.2623 46.4632 REMARK 3 T TENSOR REMARK 3 T11: 0.2262 T22: 0.3558 REMARK 3 T33: 0.1418 T12: 0.0712 REMARK 3 T13: -0.0336 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.6294 L22: 2.1069 REMARK 3 L33: 2.3887 L12: 0.0562 REMARK 3 L13: -0.2124 L23: 0.8402 REMARK 3 S TENSOR REMARK 3 S11: 0.0370 S12: -0.2258 S13: -0.1330 REMARK 3 S21: 0.4167 S22: 0.1427 S23: -0.1948 REMARK 3 S31: 0.3663 S32: 0.7331 S33: -0.0912 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 243 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9034 -19.9603 47.3349 REMARK 3 T TENSOR REMARK 3 T11: 0.3597 T22: 0.7613 REMARK 3 T33: 0.2760 T12: -0.2918 REMARK 3 T13: -0.0325 T23: -0.2368 REMARK 3 L TENSOR REMARK 3 L11: 0.6995 L22: 0.5416 REMARK 3 L33: 1.4573 L12: 0.0009 REMARK 3 L13: 0.5418 L23: 0.0467 REMARK 3 S TENSOR REMARK 3 S11: 0.1513 S12: -0.3576 S13: 0.0360 REMARK 3 S21: 0.0679 S22: 0.2060 S23: -0.2420 REMARK 3 S31: -0.0415 S32: 0.3304 S33: 0.5017 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 6 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3967 -72.7003 48.9904 REMARK 3 T TENSOR REMARK 3 T11: 0.2288 T22: 0.2807 REMARK 3 T33: 0.2116 T12: -0.1041 REMARK 3 T13: -0.0691 T23: 0.1008 REMARK 3 L TENSOR REMARK 3 L11: 1.5008 L22: 2.1817 REMARK 3 L33: 0.8283 L12: 0.0276 REMARK 3 L13: -0.1863 L23: -0.6982 REMARK 3 S TENSOR REMARK 3 S11: 0.2241 S12: -0.8249 S13: -0.3548 REMARK 3 S21: 0.4723 S22: 0.0160 S23: -0.1256 REMARK 3 S31: 0.0980 S32: -0.0484 S33: 0.0440 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 63 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.4830 -48.0279 30.3898 REMARK 3 T TENSOR REMARK 3 T11: 0.2245 T22: 0.0916 REMARK 3 T33: 0.4680 T12: -0.0645 REMARK 3 T13: 0.0844 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 0.3658 L22: 1.8528 REMARK 3 L33: 1.1036 L12: 0.5871 REMARK 3 L13: 0.5457 L23: 0.4245 REMARK 3 S TENSOR REMARK 3 S11: -0.0414 S12: -0.0099 S13: 0.2945 REMARK 3 S21: -0.1048 S22: -0.0035 S23: -0.0149 REMARK 3 S31: -0.3757 S32: 0.1558 S33: 0.0377 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 76 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.6991 -58.8263 31.1960 REMARK 3 T TENSOR REMARK 3 T11: 0.1334 T22: 0.0708 REMARK 3 T33: 0.1840 T12: -0.0273 REMARK 3 T13: 0.0626 T23: -0.0751 REMARK 3 L TENSOR REMARK 3 L11: 1.2285 L22: 1.2765 REMARK 3 L33: 0.8184 L12: -0.3665 REMARK 3 L13: 0.6118 L23: -0.1054 REMARK 3 S TENSOR REMARK 3 S11: 0.0594 S12: 0.0788 S13: 0.2689 REMARK 3 S21: -0.2066 S22: -0.1749 S23: -0.1788 REMARK 3 S31: -0.0242 S32: 0.0867 S33: -0.0632 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 133 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9787 -65.3197 43.4906 REMARK 3 T TENSOR REMARK 3 T11: 0.1183 T22: 0.1939 REMARK 3 T33: 0.1224 T12: -0.0427 REMARK 3 T13: -0.0031 T23: -0.1674 REMARK 3 L TENSOR REMARK 3 L11: 1.9911 L22: 1.4407 REMARK 3 L33: 0.6135 L12: 0.2287 REMARK 3 L13: 0.0661 L23: -0.1870 REMARK 3 S TENSOR REMARK 3 S11: 0.1923 S12: -0.7423 S13: -0.1353 REMARK 3 S21: 0.0786 S22: -0.1796 S23: -0.3202 REMARK 3 S31: -0.0174 S32: 0.0807 S33: -0.2476 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 190 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7268 -68.7379 46.7127 REMARK 3 T TENSOR REMARK 3 T11: 0.1201 T22: 0.2724 REMARK 3 T33: 0.1130 T12: -0.0716 REMARK 3 T13: 0.0020 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 1.9313 L22: 0.8087 REMARK 3 L33: 2.0117 L12: 0.2528 REMARK 3 L13: 1.3253 L23: -0.1286 REMARK 3 S TENSOR REMARK 3 S11: 0.1862 S12: -0.8801 S13: -0.3551 REMARK 3 S21: 0.1036 S22: 0.0264 S23: 0.1136 REMARK 3 S31: -0.0367 S32: -0.4760 S33: 0.1992 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 243 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0305 -79.4207 45.7170 REMARK 3 T TENSOR REMARK 3 T11: 0.2081 T22: 0.2737 REMARK 3 T33: 0.2805 T12: -0.1171 REMARK 3 T13: -0.0824 T23: 0.1056 REMARK 3 L TENSOR REMARK 3 L11: 2.4832 L22: 1.7296 REMARK 3 L33: 2.4238 L12: 0.2645 REMARK 3 L13: 0.3049 L23: 0.1502 REMARK 3 S TENSOR REMARK 3 S11: 0.2768 S12: -0.5934 S13: -0.5980 REMARK 3 S21: 0.0626 S22: 0.0869 S23: -0.0742 REMARK 3 S31: 0.2439 S32: -0.2265 S33: 0.1903 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5E2E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214229. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97927 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38874 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07300 REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.75300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CHES:NAOH PH 9.5, 20% (W/V) PEG REMARK 280 8000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.05800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.10950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.75650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.10950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.05800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.75650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 ALA A 1 REMARK 465 ALA A 2 REMARK 465 ILE A 3 REMARK 465 PRO A 4 REMARK 465 GLY A 5 REMARK 465 SER A 266 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 ALA B 1 REMARK 465 ALA B 2 REMARK 465 ILE B 3 REMARK 465 PRO B 4 REMARK 465 GLY B 5 REMARK 465 SER B 266 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 400 O HOH B 421 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 230 C - N - CA ANGL. DEV. = 15.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 46 -142.22 45.67 REMARK 500 ASN A 66 1.14 -69.02 REMARK 500 ASN A 152 14.48 57.63 REMARK 500 THR A 197 -124.88 -109.70 REMARK 500 LYS A 230 34.42 101.69 REMARK 500 CYS B 46 -136.37 43.67 REMARK 500 ALA B 83 58.54 -147.81 REMARK 500 THR B 197 -117.20 -110.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC115017 RELATED DB: TARGETTRACK DBREF 5E2E A 0 266 UNP A1JML9 A1JML9_YERE8 28 294 DBREF 5E2E B 0 266 UNP A1JML9 A1JML9_YERE8 28 294 SEQADV 5E2E SER A -2 UNP A1JML9 EXPRESSION TAG SEQADV 5E2E ASN A -1 UNP A1JML9 EXPRESSION TAG SEQADV 5E2E SER B -2 UNP A1JML9 EXPRESSION TAG SEQADV 5E2E ASN B -1 UNP A1JML9 EXPRESSION TAG SEQRES 1 A 269 SER ASN ALA ALA ALA ILE PRO GLY SER LEU ASP LYS GLN SEQRES 2 A 269 LEU ALA ALA LEU GLU HIS SER ALA ASN GLY ARG LEU GLY SEQRES 3 A 269 ILE ALA MSE ILE ASN SER GLY ALA GLY THR LYS ILE LEU SEQRES 4 A 269 TYR ARG GLY ALA GLN ARG PHE PRO PHE CYS SER THR PHE SEQRES 5 A 269 LYS PHE MSE LEU ALA ALA ALA VAL LEU ASP GLN SER GLN SEQRES 6 A 269 SER GLN PRO ASN LEU LEU ASN LYS HIS ILE ASN TYR HIS SEQRES 7 A 269 GLU SER ASP LEU LEU SER TYR ALA PRO ILE THR ARG LYS SEQRES 8 A 269 ASN LEU ALA CYS GLY MSE THR VAL SER GLU LEU CYS ALA SEQRES 9 A 269 ALA THR ILE GLN TYR SER ASP ASN THR ALA ALA ASN LEU SEQRES 10 A 269 LEU ILE LYS GLU LEU GLY GLY LEU ALA ALA VAL ASN GLN SEQRES 11 A 269 PHE ALA ARG SER ILE GLY ASP GLN MSE PHE ARG LEU ASP SEQRES 12 A 269 ARG TRP GLU PRO ASP LEU ASN THR ALA LEU PRO ASN ASP SEQRES 13 A 269 PRO ARG ASP THR THR THR PRO ALA ALA MSE ALA ALA SER SEQRES 14 A 269 MSE ASN LYS LEU VAL LEU GLY ASP ALA LEU ARG PRO ALA SEQRES 15 A 269 GLN ARG SER GLN LEU ALA ALA TRP LEU LYS GLY ASN THR SEQRES 16 A 269 THR GLY ASP ALA THR ILE ARG ALA GLY ALA PRO THR ASP SEQRES 17 A 269 TRP ILE VAL GLY ASP LYS THR GLY SER GLY ASP TYR GLY SEQRES 18 A 269 THR THR ASN ASP ILE ALA VAL LEU TRP PRO THR LYS GLY SEQRES 19 A 269 ALA PRO ILE VAL LEU VAL VAL TYR PHE THR GLN ARG GLU SEQRES 20 A 269 LYS ASP ALA LYS PRO ARG ARG ASP VAL LEU ALA SER ALA SEQRES 21 A 269 THR GLN ILE ILE LEU SER GLN ILE SER SEQRES 1 B 269 SER ASN ALA ALA ALA ILE PRO GLY SER LEU ASP LYS GLN SEQRES 2 B 269 LEU ALA ALA LEU GLU HIS SER ALA ASN GLY ARG LEU GLY SEQRES 3 B 269 ILE ALA MSE ILE ASN SER GLY ALA GLY THR LYS ILE LEU SEQRES 4 B 269 TYR ARG GLY ALA GLN ARG PHE PRO PHE CYS SER THR PHE SEQRES 5 B 269 LYS PHE MSE LEU ALA ALA ALA VAL LEU ASP GLN SER GLN SEQRES 6 B 269 SER GLN PRO ASN LEU LEU ASN LYS HIS ILE ASN TYR HIS SEQRES 7 B 269 GLU SER ASP LEU LEU SER TYR ALA PRO ILE THR ARG LYS SEQRES 8 B 269 ASN LEU ALA CYS GLY MSE THR VAL SER GLU LEU CYS ALA SEQRES 9 B 269 ALA THR ILE GLN TYR SER ASP ASN THR ALA ALA ASN LEU SEQRES 10 B 269 LEU ILE LYS GLU LEU GLY GLY LEU ALA ALA VAL ASN GLN SEQRES 11 B 269 PHE ALA ARG SER ILE GLY ASP GLN MSE PHE ARG LEU ASP SEQRES 12 B 269 ARG TRP GLU PRO ASP LEU ASN THR ALA LEU PRO ASN ASP SEQRES 13 B 269 PRO ARG ASP THR THR THR PRO ALA ALA MSE ALA ALA SER SEQRES 14 B 269 MSE ASN LYS LEU VAL LEU GLY ASP ALA LEU ARG PRO ALA SEQRES 15 B 269 GLN ARG SER GLN LEU ALA ALA TRP LEU LYS GLY ASN THR SEQRES 16 B 269 THR GLY ASP ALA THR ILE ARG ALA GLY ALA PRO THR ASP SEQRES 17 B 269 TRP ILE VAL GLY ASP LYS THR GLY SER GLY ASP TYR GLY SEQRES 18 B 269 THR THR ASN ASP ILE ALA VAL LEU TRP PRO THR LYS GLY SEQRES 19 B 269 ALA PRO ILE VAL LEU VAL VAL TYR PHE THR GLN ARG GLU SEQRES 20 B 269 LYS ASP ALA LYS PRO ARG ARG ASP VAL LEU ALA SER ALA SEQRES 21 B 269 THR GLN ILE ILE LEU SER GLN ILE SER MODRES 5E2E MSE A 26 MET MODIFIED RESIDUE MODRES 5E2E MSE A 52 MET MODIFIED RESIDUE MODRES 5E2E MSE A 94 MET MODIFIED RESIDUE MODRES 5E2E MSE A 136 MET MODIFIED RESIDUE MODRES 5E2E MSE A 163 MET MODIFIED RESIDUE MODRES 5E2E MSE A 167 MET MODIFIED RESIDUE MODRES 5E2E MSE B 26 MET MODIFIED RESIDUE MODRES 5E2E MSE B 52 MET MODIFIED RESIDUE MODRES 5E2E MSE B 94 MET MODIFIED RESIDUE MODRES 5E2E MSE B 136 MET MODIFIED RESIDUE MODRES 5E2E MSE B 163 MET MODIFIED RESIDUE MODRES 5E2E MSE B 167 MET MODIFIED RESIDUE HET MSE A 26 8 HET MSE A 52 8 HET MSE A 94 8 HET MSE A 136 8 HET MSE A 163 8 HET MSE A 167 8 HET MSE B 26 8 HET MSE B 52 8 HET MSE B 94 8 HET MSE B 136 8 HET MSE B 163 8 HET MSE B 167 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 HOH *248(H2 O) HELIX 1 AA1 SER A 6 ALA A 18 1 13 HELIX 2 AA2 THR A 48 GLN A 64 1 17 HELIX 3 AA3 PRO A 65 ASN A 69 5 5 HELIX 4 AA4 HIS A 75 LEU A 79 5 5 HELIX 5 AA5 ALA A 83 ASN A 89 1 7 HELIX 6 AA6 VAL A 96 SER A 107 1 12 HELIX 7 AA7 ASP A 108 GLY A 120 1 13 HELIX 8 AA8 GLY A 121 ILE A 132 1 12 HELIX 9 AA9 PRO A 144 THR A 148 5 5 HELIX 10 AB1 THR A 159 LEU A 172 1 14 HELIX 11 AB2 ARG A 177 GLY A 190 1 14 HELIX 12 AB3 THR A 197 ALA A 202 1 6 HELIX 13 AB4 ARG A 250 GLN A 264 1 15 HELIX 14 AB5 LEU B 7 ALA B 18 1 12 HELIX 15 AB6 THR B 48 GLN B 62 1 15 HELIX 16 AB7 HIS B 75 LEU B 79 5 5 HELIX 17 AB8 ALA B 83 ASN B 89 1 7 HELIX 18 AB9 VAL B 96 TYR B 106 1 11 HELIX 19 AC1 ASP B 108 GLY B 120 1 13 HELIX 20 AC2 GLY B 121 ILE B 132 1 12 HELIX 21 AC3 PRO B 144 THR B 148 5 5 HELIX 22 AC4 THR B 159 LEU B 172 1 14 HELIX 23 AC5 ARG B 177 GLY B 190 1 14 HELIX 24 AC6 THR B 197 ALA B 202 1 6 HELIX 25 AC7 ARG B 250 GLN B 264 1 15 SHEET 1 AA1 5 LYS A 34 TYR A 37 0 SHEET 2 AA1 5 GLY A 20 ASN A 28 -1 N ILE A 24 O TYR A 37 SHEET 3 AA1 5 ILE A 234 GLN A 242 -1 O TYR A 239 N GLY A 23 SHEET 4 AA1 5 THR A 219 TRP A 227 -1 N LEU A 226 O ILE A 234 SHEET 5 AA1 5 ILE A 207 GLY A 215 -1 N GLY A 213 O ASN A 221 SHEET 1 AA2 2 PHE A 43 PRO A 44 0 SHEET 2 AA2 2 THR A 157 THR A 158 -1 O THR A 158 N PHE A 43 SHEET 1 AA3 2 HIS A 71 ILE A 72 0 SHEET 2 AA3 2 MSE A 94 THR A 95 -1 O MSE A 94 N ILE A 72 SHEET 1 AA4 5 LYS B 34 TYR B 37 0 SHEET 2 AA4 5 GLY B 20 ASN B 28 -1 N MSE B 26 O ILE B 35 SHEET 3 AA4 5 ILE B 234 GLN B 242 -1 O TYR B 239 N GLY B 23 SHEET 4 AA4 5 THR B 219 TRP B 227 -1 N LEU B 226 O ILE B 234 SHEET 5 AA4 5 ILE B 207 GLY B 215 -1 N ILE B 207 O TRP B 227 SHEET 1 AA5 2 PHE B 43 PRO B 44 0 SHEET 2 AA5 2 THR B 157 THR B 158 -1 O THR B 158 N PHE B 43 SHEET 1 AA6 2 HIS B 71 ILE B 72 0 SHEET 2 AA6 2 MSE B 94 THR B 95 -1 O MSE B 94 N ILE B 72 SSBOND 1 CYS A 92 CYS B 92 1555 1555 2.07 LINK C ALA A 25 N MSE A 26 1555 1555 1.33 LINK C MSE A 26 N ILE A 27 1555 1555 1.33 LINK C PHE A 51 N MSE A 52 1555 1555 1.33 LINK C MSE A 52 N LEU A 53 1555 1555 1.33 LINK C GLY A 93 N MSE A 94 1555 1555 1.33 LINK C MSE A 94 N THR A 95 1555 1555 1.33 LINK C GLN A 135 N MSE A 136 1555 1555 1.34 LINK C MSE A 136 N PHE A 137 1555 1555 1.33 LINK C ALA A 162 N MSE A 163 1555 1555 1.34 LINK C MSE A 163 N ALA A 164 1555 1555 1.34 LINK C SER A 166 N MSE A 167 1555 1555 1.33 LINK C MSE A 167 N ASN A 168 1555 1555 1.34 LINK C ALA B 25 N MSE B 26 1555 1555 1.32 LINK C MSE B 26 N ILE B 27 1555 1555 1.33 LINK C PHE B 51 N MSE B 52 1555 1555 1.33 LINK C MSE B 52 N LEU B 53 1555 1555 1.33 LINK C GLY B 93 N MSE B 94 1555 1555 1.34 LINK C MSE B 94 N THR B 95 1555 1555 1.32 LINK C GLN B 135 N MSE B 136 1555 1555 1.33 LINK C MSE B 136 N PHE B 137 1555 1555 1.33 LINK C ALA B 162 N MSE B 163 1555 1555 1.33 LINK C MSE B 163 N ALA B 164 1555 1555 1.34 LINK C SER B 166 N MSE B 167 1555 1555 1.33 LINK C MSE B 167 N ASN B 168 1555 1555 1.34 CISPEP 1 GLU A 143 PRO A 144 0 -2.16 CISPEP 2 THR A 229 LYS A 230 0 -2.21 CISPEP 3 GLU B 143 PRO B 144 0 -0.75 CRYST1 42.116 93.513 122.219 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023744 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010694 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008182 0.00000 MASTER 438 0 12 25 18 0 0 6 0 0 0 42 END