HEADER HYDROLASE 09-SEP-15 5DN5 TITLE STRUCTURE OF A C-TERMINALLY TRUNCATED GLYCOSIDE HYDROLASE DOMAIN FROM TITLE 2 SALMONELLA TYPHIMURIUM FLGJ COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDOGLYCAN HYDROLASE FLGJ; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 151-301; COMPND 5 SYNONYM: MURAMIDASE FLGJ; COMPND 6 EC: 3.2.1.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM (STRAIN LT2 / SGSC1412 / SOURCE 3 ATCC 700720); SOURCE 4 ORGANISM_TAXID: 99287; SOURCE 5 STRAIN: LT2 / SGSC1412 / ATCC 700720; SOURCE 6 GENE: FLGJ, FLA FX, FLAZ, STM1182; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 DE3 GOLD HTE KEYWDS GLYCOSIDE HYDROLASE, FAMILY 73, FLGJ, FLAGELLA, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.ZALOBA,B.A.BAILEY-ELKIN,B.L.MARK REVDAT 3 08-JAN-20 5DN5 1 REMARK REVDAT 2 20-SEP-17 5DN5 1 REMARK REVDAT 1 24-FEB-16 5DN5 0 JRNL AUTH P.ZALOBA,B.A.BAILEY-ELKIN,M.DERKSEN,B.L.MARK JRNL TITL STRUCTURAL AND BIOCHEMICAL INSIGHTS INTO THE PEPTIDOGLYCAN JRNL TITL 2 HYDROLASE DOMAIN OF FLGJ FROM SALMONELLA TYPHIMURIUM. JRNL REF PLOS ONE V. 11 49204 2016 JRNL REFN ESSN 1932-6203 JRNL PMID 26871950 JRNL DOI 10.1371/JOURNAL.PONE.0149204 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 21761 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1096 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7592 - 4.2962 1.00 2629 172 0.1730 0.2378 REMARK 3 2 4.2962 - 3.4116 1.00 2589 136 0.1451 0.2212 REMARK 3 3 3.4116 - 2.9808 1.00 2623 113 0.1722 0.2381 REMARK 3 4 2.9808 - 2.7085 1.00 2570 143 0.1833 0.2807 REMARK 3 5 2.7085 - 2.5145 1.00 2582 135 0.1896 0.2850 REMARK 3 6 2.5145 - 2.3663 0.99 2568 119 0.1927 0.2713 REMARK 3 7 2.3663 - 2.2478 0.99 2526 160 0.2002 0.2854 REMARK 3 8 2.2478 - 2.1500 0.99 2578 118 0.2090 0.2822 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3312 REMARK 3 ANGLE : 1.409 4521 REMARK 3 CHIRALITY : 0.053 528 REMARK 3 PLANARITY : 0.006 585 REMARK 3 DIHEDRAL : 14.677 1136 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DN5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000213476. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21763 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 37.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.83000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35 MG/ML PROTEIN IN 18-22% REMARK 280 POLYETHYLENE GLYCOL 3350 AND 0.25-0.35 M NAI, PH 8.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 52.85000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.56000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 52.85000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.56000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 548 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 150 REMARK 465 GLY A 302 REMARK 465 SER A 303 REMARK 465 HIS A 304 REMARK 465 HIS A 305 REMARK 465 HIS A 306 REMARK 465 HIS A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 MET B 150 REMARK 465 GLY B 302 REMARK 465 SER B 303 REMARK 465 HIS B 304 REMARK 465 HIS B 305 REMARK 465 HIS B 306 REMARK 465 HIS B 307 REMARK 465 HIS B 308 REMARK 465 HIS B 309 REMARK 465 MET C 150 REMARK 465 ASP C 151 REMARK 465 GLY C 279 REMARK 465 TYR C 280 REMARK 465 ALA C 281 REMARK 465 THR C 282 REMARK 465 ASP C 283 REMARK 465 PRO C 284 REMARK 465 ASN C 285 REMARK 465 TYR C 286 REMARK 465 ALA C 287 REMARK 465 GLY C 302 REMARK 465 SER C 303 REMARK 465 HIS C 304 REMARK 465 HIS C 305 REMARK 465 HIS C 306 REMARK 465 HIS C 307 REMARK 465 HIS C 308 REMARK 465 HIS C 309 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 153 CG CD CE NZ REMARK 470 LYS A 213 CG CD CE NZ REMARK 470 GLU A 218 CG CD OE1 OE2 REMARK 470 GLU A 225 CG CD OE1 OE2 REMARK 470 ASN A 226 CG OD1 ND2 REMARK 470 LYS A 230 CG CD CE NZ REMARK 470 LYS A 231 CG CD CE NZ REMARK 470 ARG A 255 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 258 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 285 ND2 REMARK 470 ARG A 288 NE CZ NH1 NH2 REMARK 470 LYS B 153 CG CD CE NZ REMARK 470 LYS B 213 CD CE NZ REMARK 470 GLU B 225 CG CD OE1 OE2 REMARK 470 LYS B 233 CD CE NZ REMARK 470 LYS B 235 CG CD CE NZ REMARK 470 ARG B 258 CG CD NE CZ NH1 NH2 REMARK 470 THR B 282 OG1 CG2 REMARK 470 ARG B 288 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 289 CG CD CE NZ REMARK 470 SER B 292 OG REMARK 470 LYS B 298 CG CD CE NZ REMARK 470 SER B 301 OG REMARK 470 LYS C 153 CG CD CE NZ REMARK 470 LYS C 213 CD CE NZ REMARK 470 GLU C 225 CG CD OE1 OE2 REMARK 470 LYS C 230 CD CE NZ REMARK 470 ARG C 255 CG CD NE CZ NH1 NH2 REMARK 470 ASN C 256 CG OD1 ND2 REMARK 470 ARG C 258 CG CD NE CZ NH1 NH2 REMARK 470 THR C 263 OG1 CG2 REMARK 470 THR C 264 OG1 CG2 REMARK 470 GLN C 270 CG CD OE1 NE2 REMARK 470 VAL C 273 CG1 CG2 REMARK 470 GLN C 276 CG CD OE1 NE2 REMARK 470 ASN C 277 CG OD1 ND2 REMARK 470 ARG C 288 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 289 CG CD CE NZ REMARK 470 THR C 291 OG1 CG2 REMARK 470 SER C 292 OG REMARK 470 MET C 293 CG SD CE REMARK 470 GLN C 295 CG CD OE1 NE2 REMARK 470 LYS C 298 CG CD CE NZ REMARK 470 SER C 301 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 184 HH TYR B 286 1.55 REMARK 500 HH22 ARG B 255 OD2 ASP C 154 1.58 REMARK 500 O HOH B 508 O HOH B 537 1.93 REMARK 500 OE1 GLU C 195 O HOH C 501 2.00 REMARK 500 O HOH A 519 O HOH A 554 2.04 REMARK 500 O HOH A 551 O HOH A 553 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 194 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 152 77.64 -63.36 REMARK 500 TYR A 201 16.34 57.90 REMARK 500 SER A 241 162.86 179.09 REMARK 500 ALA A 278 -4.44 -53.22 REMARK 500 ALA A 281 -14.98 67.49 REMARK 500 TYR B 201 19.58 54.40 REMARK 500 THR B 221 -169.73 -112.36 REMARK 500 ALA B 281 79.34 52.54 REMARK 500 MET B 300 161.60 178.66 REMARK 500 TYR C 201 18.43 53.60 REMARK 500 ARG C 255 -12.56 74.27 REMARK 500 ASN C 277 60.71 -67.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD C 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 407 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5DN4 RELATED DB: PDB REMARK 900 5DN4 IS THE FULL-LENGTH GLYCOSIDE HYDROLASE DOMAIN OF FLGJ FROM REMARK 900 SALMONELLA TYPHIMURIUM DBREF 5DN5 A 151 301 UNP P15931 FLGJ_SALTY 151 301 DBREF 5DN5 B 151 301 UNP P15931 FLGJ_SALTY 151 301 DBREF 5DN5 C 151 301 UNP P15931 FLGJ_SALTY 151 301 SEQADV 5DN5 MET A 150 UNP P15931 INITIATING METHIONINE SEQADV 5DN5 GLY A 302 UNP P15931 EXPRESSION TAG SEQADV 5DN5 SER A 303 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS A 304 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS A 305 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS A 306 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS A 307 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS A 308 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS A 309 UNP P15931 EXPRESSION TAG SEQADV 5DN5 MET B 150 UNP P15931 INITIATING METHIONINE SEQADV 5DN5 GLY B 302 UNP P15931 EXPRESSION TAG SEQADV 5DN5 SER B 303 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS B 304 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS B 305 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS B 306 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS B 307 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS B 308 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS B 309 UNP P15931 EXPRESSION TAG SEQADV 5DN5 MET C 150 UNP P15931 INITIATING METHIONINE SEQADV 5DN5 GLY C 302 UNP P15931 EXPRESSION TAG SEQADV 5DN5 SER C 303 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS C 304 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS C 305 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS C 306 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS C 307 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS C 308 UNP P15931 EXPRESSION TAG SEQADV 5DN5 HIS C 309 UNP P15931 EXPRESSION TAG SEQRES 1 A 160 MET ASP SER LYS ASP PHE LEU ALA ARG LEU SER LEU PRO SEQRES 2 A 160 ALA ARG LEU ALA SER GLU GLN SER GLY VAL PRO HIS HIS SEQRES 3 A 160 LEU ILE LEU ALA GLN ALA ALA LEU GLU SER GLY TRP GLY SEQRES 4 A 160 GLN ARG GLN ILE LEU ARG GLU ASN GLY GLU PRO SER TYR SEQRES 5 A 160 ASN VAL PHE GLY VAL LYS ALA THR ALA SER TRP LYS GLY SEQRES 6 A 160 PRO VAL THR GLU ILE THR THR THR GLU TYR GLU ASN GLY SEQRES 7 A 160 GLU ALA LYS LYS VAL LYS ALA LYS PHE ARG VAL TYR SER SEQRES 8 A 160 SER TYR LEU GLU ALA LEU SER ASP TYR VAL ALA LEU LEU SEQRES 9 A 160 THR ARG ASN PRO ARG TYR ALA ALA VAL THR THR ALA ALA SEQRES 10 A 160 THR ALA GLU GLN GLY ALA VAL ALA LEU GLN ASN ALA GLY SEQRES 11 A 160 TYR ALA THR ASP PRO ASN TYR ALA ARG LYS LEU THR SER SEQRES 12 A 160 MET ILE GLN GLN LEU LYS ALA MET SER GLY SER HIS HIS SEQRES 13 A 160 HIS HIS HIS HIS SEQRES 1 B 160 MET ASP SER LYS ASP PHE LEU ALA ARG LEU SER LEU PRO SEQRES 2 B 160 ALA ARG LEU ALA SER GLU GLN SER GLY VAL PRO HIS HIS SEQRES 3 B 160 LEU ILE LEU ALA GLN ALA ALA LEU GLU SER GLY TRP GLY SEQRES 4 B 160 GLN ARG GLN ILE LEU ARG GLU ASN GLY GLU PRO SER TYR SEQRES 5 B 160 ASN VAL PHE GLY VAL LYS ALA THR ALA SER TRP LYS GLY SEQRES 6 B 160 PRO VAL THR GLU ILE THR THR THR GLU TYR GLU ASN GLY SEQRES 7 B 160 GLU ALA LYS LYS VAL LYS ALA LYS PHE ARG VAL TYR SER SEQRES 8 B 160 SER TYR LEU GLU ALA LEU SER ASP TYR VAL ALA LEU LEU SEQRES 9 B 160 THR ARG ASN PRO ARG TYR ALA ALA VAL THR THR ALA ALA SEQRES 10 B 160 THR ALA GLU GLN GLY ALA VAL ALA LEU GLN ASN ALA GLY SEQRES 11 B 160 TYR ALA THR ASP PRO ASN TYR ALA ARG LYS LEU THR SER SEQRES 12 B 160 MET ILE GLN GLN LEU LYS ALA MET SER GLY SER HIS HIS SEQRES 13 B 160 HIS HIS HIS HIS SEQRES 1 C 160 MET ASP SER LYS ASP PHE LEU ALA ARG LEU SER LEU PRO SEQRES 2 C 160 ALA ARG LEU ALA SER GLU GLN SER GLY VAL PRO HIS HIS SEQRES 3 C 160 LEU ILE LEU ALA GLN ALA ALA LEU GLU SER GLY TRP GLY SEQRES 4 C 160 GLN ARG GLN ILE LEU ARG GLU ASN GLY GLU PRO SER TYR SEQRES 5 C 160 ASN VAL PHE GLY VAL LYS ALA THR ALA SER TRP LYS GLY SEQRES 6 C 160 PRO VAL THR GLU ILE THR THR THR GLU TYR GLU ASN GLY SEQRES 7 C 160 GLU ALA LYS LYS VAL LYS ALA LYS PHE ARG VAL TYR SER SEQRES 8 C 160 SER TYR LEU GLU ALA LEU SER ASP TYR VAL ALA LEU LEU SEQRES 9 C 160 THR ARG ASN PRO ARG TYR ALA ALA VAL THR THR ALA ALA SEQRES 10 C 160 THR ALA GLU GLN GLY ALA VAL ALA LEU GLN ASN ALA GLY SEQRES 11 C 160 TYR ALA THR ASP PRO ASN TYR ALA ARG LYS LEU THR SER SEQRES 12 C 160 MET ILE GLN GLN LEU LYS ALA MET SER GLY SER HIS HIS SEQRES 13 C 160 HIS HIS HIS HIS HET IOD A 401 1 HET IOD A 402 1 HET NA A 403 1 HET IOD B 401 1 HET IOD B 402 1 HET IOD B 403 1 HET IOD C 401 1 HET IOD C 402 1 HET IOD C 403 1 HET IOD C 404 1 HET IOD C 405 1 HET CL C 406 1 HET CL C 407 1 HETNAM IOD IODIDE ION HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION FORMUL 4 IOD 10(I 1-) FORMUL 6 NA NA 1+ FORMUL 15 CL 2(CL 1-) FORMUL 17 HOH *179(H2 O) HELIX 1 AA1 LYS A 153 GLY A 171 1 19 HELIX 2 AA2 PRO A 173 SER A 185 1 13 HELIX 3 AA3 SER A 241 ARG A 255 1 15 HELIX 4 AA4 ASN A 256 ALA A 260 5 5 HELIX 5 AA5 THR A 267 ALA A 278 1 12 HELIX 6 AA6 GLY A 279 ASP A 283 5 5 HELIX 7 AA7 ASN A 285 SER A 301 1 17 HELIX 8 AA8 SER B 152 GLY B 171 1 20 HELIX 9 AA9 PRO B 173 GLY B 186 1 14 HELIX 10 AB1 SER B 241 ASN B 256 1 16 HELIX 11 AB2 TYR B 259 THR B 264 1 6 HELIX 12 AB3 ALA B 268 ASN B 277 1 10 HELIX 13 AB4 ASP B 283 ALA B 299 1 17 HELIX 14 AB5 ASP C 154 GLY C 171 1 18 HELIX 15 AB6 PRO C 173 GLY C 186 1 14 HELIX 16 AB7 SER C 241 THR C 254 1 14 HELIX 17 AB8 ASN C 256 ARG C 258 5 3 HELIX 18 AB9 TYR C 259 THR C 264 1 6 HELIX 19 AC1 ALA C 268 ASN C 277 1 10 HELIX 20 AC2 LYS C 289 MET C 300 1 12 SHEET 1 AA1 2 VAL A 216 GLU A 225 0 SHEET 2 AA1 2 GLU A 228 ARG A 237 -1 O PHE A 236 N THR A 217 SHEET 1 AA2 2 VAL B 216 GLU B 225 0 SHEET 2 AA2 2 GLU B 228 ARG B 237 -1 O PHE B 236 N THR B 217 SHEET 1 AA3 2 VAL C 216 GLU C 225 0 SHEET 2 AA3 2 GLU C 228 ARG C 237 -1 O PHE C 236 N THR C 217 LINK OG1 THR A 254 NA NA A 403 1555 1555 2.66 SITE 1 AC1 2 SER A 200 TYR A 201 SITE 1 AC2 3 VAL A 250 ALA A 251 THR A 254 SITE 1 AC3 2 TYR B 224 GLY B 227 SITE 1 AC4 1 TYR B 201 SITE 1 AC5 1 LYS C 233 SITE 1 AC6 2 TYR A 224 GLY A 227 SITE 1 AC7 2 TYR C 224 GLY C 227 SITE 1 AC8 1 TYR C 201 SITE 1 AC9 2 ALA C 268 HOH C 528 CRYST1 105.700 61.120 65.220 90.00 106.70 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009461 0.000000 0.002838 0.00000 SCALE2 0.000000 0.016361 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016008 0.00000 MASTER 422 0 13 20 6 0 9 6 0 0 0 39 END